AMCG00005766


Basic Information

Item Value
gene id AMCG00005766
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 9475577 ~ 9479846 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005766
ATGGATGCGACTCGCTTTAGTGCGCTGCAGTACTCCTTCAGCACAGAGaaattcatcatcatcataaaaacacGAATCACAATAAGCAAGACCCAACAGAATGGGGAAGAGAGAGGTGGCGATCTCGTGCACACTGTGGCCAGCAGAGACCCCGGCAGCGAGACGCGCTCGGTGCTGCAGGAGCAGACGACAGCGCTGGGTCTGGCCATGTTCGCCCTGCTGGTGCAGCGCTGCACTGAGCTGCTGAAGGAGACGCCCAGGGctcccCCTGGCGCGGACGAGAGTGAcggtggggaggaggagggggtggtcAAGGTGTCGTCCTTCCTTTTAGACCTGCGGGAGCTGCTGCCATGTGTGAAGGTTTGGTCAGACTGGATGCTGGGGCAGCCAGAGCAGTGGAACCCGGCTCCGCCCAGCCTGCCTCTGCCCATTGGCTGTGCCCCGGACGTCTGGCAGTGCCTGGCGGAGCTGTGCAACGTGCTGGCGCTGGTGAGCCAGGCGGAGGTGCCGCTGTACAAGGACCCCGACGAGGAGCTCAGCCTGCTGGTGCTGGAGGAGGACCGGCTGCTGTCAGGGTTCATCCCCTTGCTCGGGGCACCCCAGGAGCCCTGCTACGTGGACAGCGACTGCGACAAGGTCAGGACCCTCCCCCTTCCTGGCCCCCGCCTCTTCACCGCTCCCATAGGGATAGCGGTGGCACTGGTGGGCACAGAGAGACGGGCAGTGCTTGTGTGCGCAGCAGGGGAAGGGGGCTACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005766 True 762 mRNA 0.64 5 9475577 9479846

Neighbor

gene id symbol gene type direction distance location
AMCG00005765 NA coding downstream 12516 9439061 ~ 9463061 (-)
AMCG00005785 LOC106613037,LOC105023190,LOC106581166,LOC108431344,LOC105896252 coding downstream 104155 9350434 ~ 9371422 (-)
AMCG00005786 NA coding downstream 135847 9334059 ~ 9339730 (-)
AMCG00005777 NA coding downstream 192837 9273785 ~ 9282740 (-)
AMCG00005779 NA coding downstream 269116 9203915 ~ 9206461 (-)
AMCG00005773 NA coding upstream 20182 9500028 ~ 9508536 (-)
AMCG00005771 NA coding upstream 41452 9521298 ~ 9535270 (-)
AMCG00005772 NA coding upstream 93091 9572937 ~ 9580695 (-)
AMCG00005770 NA coding upstream 107953 9587799 ~ 9589780 (-)
AMCG00005780 LOC103366110 coding upstream 129245 9609091 ~ 9625629 (-)
G154260 NA non-coding downstream 37678 9435880 ~ 9437899 (-)
G154237 NA non-coding downstream 82244 9343755 ~ 9393333 (-)
G154235 NA non-coding downstream 143544 9331343 ~ 9332033 (-)
G154234 git1 non-coding downstream 145044 9325522 ~ 9330533 (-)
G154157 blmh,LOC106612652 non-coding downstream 335751 9128770 ~ 9139826 (-)
G154280 NA non-coding upstream 92369 9572215 ~ 9572908 (-)
G154391 NA non-coding upstream 609708 10089554 ~ 10091616 (-)
G154399 NA non-coding upstream 657582 10137428 ~ 10138925 (-)
G154400 NA non-coding upstream 664637 10144483 ~ 10144931 (-)
G154575 NA non-coding upstream 1096124 10575970 ~ 10576502 (-)
G154250 NA other downstream 40637 9425290 ~ 9434940 (-)
G154142 NA other downstream 383004 9090422 ~ 9092573 (-)
G153806 NA other downstream 1350892 8091748 ~ 8124685 (-)
AMCG00005704 NA other downstream 1474172 7999336 ~ 8001405 (-)
G153733 auts2 other downstream 1687256 7785554 ~ 7788321 (-)
AMCG00005850 NA other upstream 815753 10295599 ~ 10352782 (-)
AMCG00005862 NA other upstream 1063688 10543534 ~ 10551355 (-)
AMCG00005839 LOC103367321,LOC107729686,LOC103398303 other upstream 1258698 10738544 ~ 10752114 (-)
G154677 ef2,eef2,LOC106613766,LOC101482186,LOC107384141,LOC108427162,LOC108414462,LOC102796634 other upstream 1363995 10843841 ~ 10912745 (-)
AMCG00005831 shdb,LOC107719565,LOC107676987,LOC107729709,LOC103027120,LOC106584413,LOC108439278 other upstream 1369669 10849515 ~ 10865796 (-)

Expression


Co-expression Network