AMCG00005773


Basic Information

Item Value
gene id AMCG00005773
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 9500028 ~ 9508536 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005773
ATGCTTGAACGTGAACAGACTTACGAGGTGAGCTACGCTAGGGATCGAAAAACAAGCCACCTGGCCCGACTTGCACAGCACGAGTTCCAGATAAGTGGGTTAGTCATTTCAACTGTTCGAGTTGAAGAGCACACGGTGGATTCCGGCAAGAAGcTCAATAAGAGGTTTATCCTGAGCTTCCTGCACGCTCATGGCAAGCTCTTCACTAAAGTGGGGATGGAGACGTTCCCAGAGGTGGCGGCCCGGGTCCTGCAGGAGTTCCACGCGCTGCTGCAGCACAGCCCCTCCCCGCTGGGCAGCACACGCATGCTGCAGATCACCACCATCAACATGTTCGCCGTGTACAACGCACACAGCCGCGTGAACTCGGGCTGTTTTTCTGTCGTGTTTGAAGAAGTGAAACTGCACTGTGGGCTGCGTGGCGAGTGCCCACACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005773 True 438 mRNA 0.56 4 9500028 9508536

Neighbor

gene id symbol gene type direction distance location
AMCG00005766 NA coding downstream 20182 9475577 ~ 9479846 (-)
AMCG00005765 NA coding downstream 36967 9439061 ~ 9463061 (-)
AMCG00005785 LOC106613037,LOC105023190,LOC106581166,LOC108431344,LOC105896252 coding downstream 128606 9350434 ~ 9371422 (-)
AMCG00005786 NA coding downstream 160298 9334059 ~ 9339730 (-)
AMCG00005777 NA coding downstream 217288 9273785 ~ 9282740 (-)
AMCG00005771 NA coding upstream 12762 9521298 ~ 9535270 (-)
AMCG00005772 NA coding upstream 64401 9572937 ~ 9580695 (-)
AMCG00005770 NA coding upstream 79263 9587799 ~ 9589780 (-)
AMCG00005780 LOC103366110 coding upstream 100555 9609091 ~ 9625629 (-)
AMCG00005782 NA coding upstream 125248 9633784 ~ 9639483 (-)
G154260 NA non-coding downstream 62129 9435880 ~ 9437899 (-)
G154237 NA non-coding downstream 106695 9343755 ~ 9393333 (-)
G154235 NA non-coding downstream 167995 9331343 ~ 9332033 (-)
G154234 git1 non-coding downstream 169495 9325522 ~ 9330533 (-)
G154157 blmh,LOC106612652 non-coding downstream 360202 9128770 ~ 9139826 (-)
G154280 NA non-coding upstream 63679 9572215 ~ 9572908 (-)
G154391 NA non-coding upstream 581018 10089554 ~ 10091616 (-)
G154399 NA non-coding upstream 628892 10137428 ~ 10138925 (-)
G154400 NA non-coding upstream 635947 10144483 ~ 10144931 (-)
G154575 NA non-coding upstream 1067434 10575970 ~ 10576502 (-)
G154250 NA other downstream 65088 9425290 ~ 9434940 (-)
G154142 NA other downstream 407455 9090422 ~ 9092573 (-)
G153806 NA other downstream 1375343 8091748 ~ 8124685 (-)
AMCG00005704 NA other downstream 1498623 7999336 ~ 8001405 (-)
G153733 auts2 other downstream 1711707 7785554 ~ 7788321 (-)
AMCG00005850 NA other upstream 787063 10295599 ~ 10352782 (-)
AMCG00005862 NA other upstream 1034998 10543534 ~ 10551355 (-)
AMCG00005839 LOC103367321,LOC107729686,LOC103398303 other upstream 1230008 10738544 ~ 10752114 (-)
G154677 ef2,eef2,LOC106613766,LOC101482186,LOC107384141,LOC108427162,LOC108414462,LOC102796634 other upstream 1335305 10843841 ~ 10912745 (-)
AMCG00005831 shdb,LOC107719565,LOC107676987,LOC107729709,LOC103027120,LOC106584413,LOC108439278 other upstream 1340979 10849515 ~ 10865796 (-)

Expression


Co-expression Network