AMCG00005783


Basic Information

Item Value
gene id AMCG00005783
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 9346443 ~ 9349421 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005783
gtcagtGCAGAGGGAGGGCCTCTGTGGCTGTGTGGCTGTCAGACTGAAGGAGGCTGGACTGAGCTGCCTGTGAACGAGCCGGAGACCTGGAGCTCTAGCACGGGGTGGTAACTTCATTTTCACACCTTGCTCTGCTCAGATTCTAAAAGCAAGTATTATTTTCGACTTTCTACAGTGTTCCCGATTCCTTTGTTTAAACCACTATCAGTGAAATAGAGCTGGAGGACGGTTAGCTTTGTTAACCGATTGTTCTTGCTCTCACATGGTGTTATAGGTAAacagttttttcttctgtgcttGAAGTCGAGCAAGAGCGGTAAACAGAGCAGACCGGGGCTGGGCCGTGTGGACAGCAACACATTAATGACTGTGCGGCAGAGGGGCTGAGAGTGGAGGGACTGACCCGGTGGGGTGGACAGGGCTGGGCAGCACACTCCATTGATCCAGGAGATTCCTGCCGGGGAGAGGAGACCACAGCCGAAAGTGTGTTAGAGGCAATTCTAAACCTACCTTTCACCACCAGCTACTGTCCCTGGACATACTGGAGCTCGGGACTCTGCCTGCCCGGGTGCGCTGCTCCCATGGAGGAGTCTGTGGTGGTCCTGCTCCCGGGGCTGGCCCTGCTGTTCTTGGGTCTCCTCCTGCGGCTGTTCAGGCTCAGGGTGGCAGCGGCGGTAGGGCGGCTAGGTGCGGTGATTTGGCGTCAGCTGGGGGCTCGGCTGCATTTCCCCCTGGATCACTCCGAGAGGCCCCAACTGATCTCTAAGCCCTCAGCCCTGGCCCGCTACCTGCTGCAGCACTGTGGCTCCCTGGCCCGGCCCAGCCTGGTACCCTGGCCCTGGAGTGACCCGCACATCCAGACCCTCCACAGCCAGGCCTGTCCAGTGGGGGACTCCTCGGGGGAGGTGAGCTTCGCTCGGGACCTCCTGGAGCTGCAGGACGGGGGTGTCGTGGCCCTAGACTGGGCGGTGGCCACCCCAAGAGACCGGGGCAAACCCCGGGCACCCTCAGCCACCCCTTCCATCCTCATCGTGGTGCCCAACTGTTGGGGGGGGCTGACACTGCATGTGCTGCGGCTGTGCAGACTGGCACTGGCGCAGGGCTTCTACCCGGTGGTGTTCCACCGCAGGGGGCAGGGCGGCTGCCCGCTGGTCACCCCAGCTCTACAGCAGTTCGGCGACCCTGCAGACCTGATCGAGGCCGTGTCCTACATCCGCTGCCGCCACCCCTCCTCAGCGCTGGTGGCGGTCAGTGAGGGCTCGGGGGCTGGGTTGCTGCTGTCCTACCTGGGGGAGTGCGGCTCCTCCTCCTACCTCAAAGCCGCGGTCTGCCTGTCACCCATCTTCCACGGCCAGCTGTGGTTCGAGAcgcccctgccccccccctaCAGGTGGGCCCTGCTGATCTACCAGAAACTGCAGCTCAGCAGgtatgCCACCACTCTGAGCTCTGTGATGGATGTGGAGGCGGCGCTGCGCTGCTCCTCCCTGCGTGACTTTGAGGAGGCCCTGTTCTGCTCCAAGGGCACTGGGAAGGCGGGGGGCACAGAGCAACCAGCGCCGCTGGACTGGGAGGGGTACTGGGAGAAGAACGAGCCCCTGCGGGATGTGGACGAAGTGGCGGTGCCGGTGCTGTGCCTGAGCAGCTGGGACGACCCGCTGAGGGGGGACCCCCGCACCTCGCTGCCCTTCGACCTCTTCCGGAGCAGCCCCTACTTCCTGCTGGTGCTGACGGGGTGTGGGGGACACTGTGGCCTTGGGGCCGGGGGTCGTGGCGAGCCCTGCTGGAGCCACGCCGCCACGCTGGAGTACTTCCGGGTGGTGGGTGAGTTCCTGCGTGCCGAGGAGAGGGGAGGACTGGGGGGCGGCGGGCTGCTGCCCAGACGCAGGACCAGCACACAGCTGCCCCGGCGGCGGAGAGGCACCGTGCTGAGGAGGGACAGGACCACCCCCACCACCGCGCCCCCCACTGACCAGCCCGACCTGCCTGACCTGTTCCAGTGGCACAGATCCTACACCCGCTGAGCAGAGAGACAGTACCTGCCGAGTAGAGATGGAGGAAAAAGATCCTACACATACTGATCAGACAGACAGATCCAATACTCGGAGCAGAtcggggaggggagagaaagggggacaGGTCCTAAATGAGAACGAGTAATGTCTTTCTTTActaaacctttttaaatgattttttttaactccaaGGTTAAGATGATTATCTTACTCATAAGTTACAAAGgactgcctttttaaaaataaaaaataaaataaaaaccacactCTCGGACTACATTTGTACATGCATTTCTTAGAAGAAAAAAGCGATGCCGCAGTGGAGTGAATGACAATACAGGGGTCGGCACACAGTCTTGCCTACTCAGACTAAACCTGTTTATACTTGAGTGATATTCTCTGTAACGCGTGGCAGGATTTTGCCGCTACCCTCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005783 True 2450 mRNA 0.60 2 9346443 9349421

Neighbor

gene id symbol gene type direction distance location
AMCG00005784 NA coding upstream 15853 9299585 ~ 9330590 (+)
AMCG00005775 NA coding upstream 77207 9252354 ~ 9269236 (+)
AMCG00005774 ssh2 coding upstream 94613 9240634 ~ 9251830 (+)
AMCG00005750 NA coding upstream 165638 9165033 ~ 9180805 (+)
AMCG00005753 NA coding upstream 182227 9159231 ~ 9164216 (+)
AMCG00005764 NA coding downstream 47704 9397125 ~ 9406873 (+)
AMCG00005763 NA coding downstream 75886 9425307 ~ 9427544 (+)
AMCG00005767 LOC103370200 coding downstream 449576 9798997 ~ 9808730 (+)
AMCG00005768 NA coding downstream 511498 9860919 ~ 9868588 (+)
AMCG00005808 slc13a5,LOC106612936,LOC106581085 coding downstream 558425 9907846 ~ 9921070 (+)
G154175 NA non-coding upstream 152256 9192296 ~ 9194187 (+)
G154147 NA non-coding upstream 238073 9100429 ~ 9108370 (+)
G154143 NA non-coding upstream 251773 9093909 ~ 9094670 (+)
G154091 NA non-coding upstream 274696 9021950 ~ 9071747 (+)
G154030 NA non-coding upstream 550019 8793827 ~ 8796424 (+)
G154252 NA non-coding downstream 91072 9440493 ~ 9441381 (+)
G154343 NA non-coding downstream 556351 9905772 ~ 9944143 (+)
G154388 NA non-coding downstream 728886 10078307 ~ 10079436 (+)
G154447 NA non-coding downstream 936093 10285514 ~ 10332094 (+)
G154451 NA non-coding downstream 953536 10302957 ~ 10303497 (+)
AMCG00005787 NA other upstream 492343 8828578 ~ 8854100 (+)
AMCG00005720 NA other upstream 839346 8498502 ~ 8507097 (+)
G153815 NA other upstream 1115853 8213904 ~ 8230590 (+)
AMCG00005660 LOC106603524 other upstream 1558572 7749183 ~ 7787871 (+)
AMCG00005694 NA other upstream 2011872 7307058 ~ 7334571 (+)
G154251 NA other downstream 86479 9435900 ~ 9438269 (+)
G154283 NA other downstream 238381 9587802 ~ 9589798 (+)
G154330 NA other downstream 531961 9881382 ~ 9883955 (+)
AMCG00005802 NA other downstream 715739 10065160 ~ 10089769 (+)
AMCG00005929 NA other downstream 917852 10267273 ~ 10356244 (+)

Expression


Co-expression Network