AMCG00005788


Basic Information

Item Value
gene id AMCG00005788
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 8876410 ~ 8883801 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005788
ATGCTGTCCATCAGTCTGTCCTCCCCTCCCTCTGCTGTCTCTGGAGGGaagcGCACCTGTGGTGTCCCGCTCAGCCCAGTGATCTGTGTCAGTCGAGCCGTCCCTGTCTCAGCCTGTCAGGAGCCTCAGCTCAGCAGTCATGTCCAGCGCTCTGTCCCTCGCCGTTCTGCTCTGGACCGCCGCCCCAGCCGCAGCGTGAGAGGAGAACAGTGTGGTGCGCGTCCCTCCCACTGTGCCGTGTCTGCAGTCCGGCCTCCACAACACATCCGGCAACCGGTGCTAGCTTCGTCCTGTAGCTTTAAAGTCGACGGCATCCCACATGCAGAATGCGTTGCCTCGGGCCAGTTTGTTGACCCCAGCCAATGGCACGTAGCCTATCCCAAATGTGCGGGGAACCACCAATCGCCAGTCGACGTCGTTACCAAGGAGACCCACTACAAATCCAGCCTGAAGCCGTTTACCTTTGAAGGTTACGATCGGGCCCTCAATGTGACGGTCAAGAACCTTGGCCATGCTGCACGCTTTGATCTTCCCGAGTCAGGGAAGGTCGCGGTCCAGGGAGGGGACATGACCGGGAGCTACAAAGCTGTACAGTTCCACCTGCACTGGGGCGCGGATGCGGGGCCTGGCGCGGAGCACACCTTCGACGGAGAGAGATACCCCATGGAGCTCCATATTGTGCATGTGAAGGAGAAGTATCGCACTTTGAAAGACGCCATGCATGACTCTGCTGGTGTCGTGGTGCTGGCATTCTTCTTTGAGTTTCCTAATCTAATCCTAAACTTCTGCCCTGGTTCTGATCTCCGTTCAGATTCCAACACCACCGTCTCATCCCTGCGCTTGGACAGCCTCCTCCCCCAGCCCGAGGCGCTGGCCAGGTACTACTACTATACCGGGTCCCTGACCACACCTGAGTGTGACGAGGTGGTGACCTGGGCCTTGTTTCAGGAGCCCATTCTGATCAGCGCCACCCAGGTAGGCCTGCAGGGGACGCCCCCACACCTGTGCCACCGCCACACCTGTGCCACCCCCGACCGCAGCTCTCGTTACTCACTGCTGGTGTGTGATGGGGGCAAGCCAAGCCAACGATACCACAGGCGCTTAGTCTCCAGCCAACAGCTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005788 True 1125 mRNA 0.59 7 8876410 8883801

Neighbor

gene id symbol gene type direction distance location
AMCG00005789 NA coding upstream 3285 8869909 ~ 8873125 (+)
AMCG00005790 NA coding upstream 12187 8862478 ~ 8864223 (+)
AMCG00005791 NA coding upstream 14038 8854382 ~ 8862372 (+)
AMCG00005755 NA coding upstream 99538 8772389 ~ 8776872 (+)
AMCG00005754 NA coding upstream 114340 8756975 ~ 8762070 (+)
AMCG00005742 NA coding downstream 13476 8897277 ~ 8904084 (+)
AMCG00005746 NA coding downstream 126383 9010184 ~ 9016738 (+)
AMCG00005745 NA coding downstream 151487 9035288 ~ 9039062 (+)
AMCG00005749 ncbp3 coding downstream 199351 9083152 ~ 9092563 (+)
AMCG00005751 blmh coding downstream 231670 9115471 ~ 9128845 (+)
G154025 NA non-coding upstream 71106 8781989 ~ 8805304 (+)
G154030 NA non-coding upstream 79986 8793827 ~ 8796424 (+)
G153955 NA non-coding upstream 146255 8729803 ~ 8730155 (+)
G153859 NA non-coding upstream 524661 8345678 ~ 8351749 (+)
G153816 NA non-coding upstream 598336 8251301 ~ 8278074 (+)
G154091 NA non-coding downstream 138149 9021950 ~ 9071747 (+)
G154143 NA non-coding downstream 210108 9093909 ~ 9094670 (+)
G154147 NA non-coding downstream 216628 9100429 ~ 9108370 (+)
G154175 NA non-coding downstream 308495 9192296 ~ 9194187 (+)
G154252 NA non-coding downstream 556692 9440493 ~ 9441381 (+)
AMCG00005787 NA other upstream 22310 8828578 ~ 8854100 (+)
AMCG00005720 NA other upstream 369313 8498502 ~ 8507097 (+)
G153815 NA other upstream 645820 8213904 ~ 8230590 (+)
AMCG00005660 LOC106603524 other upstream 1088539 7749183 ~ 7787871 (+)
AMCG00005694 NA other upstream 1541839 7307058 ~ 7334571 (+)
G154251 NA other downstream 552099 9435900 ~ 9438269 (+)
G154283 NA other downstream 704001 9587802 ~ 9589798 (+)
G154330 NA other downstream 997581 9881382 ~ 9883955 (+)
AMCG00005802 NA other downstream 1181359 10065160 ~ 10089769 (+)
AMCG00005929 NA other downstream 1383472 10267273 ~ 10356244 (+)

Expression


Co-expression Network