AMCG00005789


Basic Information

Item Value
gene id AMCG00005789
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 8869909 ~ 8873125 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005789
ATGGTCACCGAGAGGGAGGCGGAGATCGCAGCGGCGCTCAAACACGACCTCAACAAGAGCCAGTTTGACACCCTGCTGTTCGAGCTGGTGGGCTTGGAGAGCGAGATCCGGCTGGCGGTGGACAGCCTGGCGGAGTGGGCGGCCCCCCGGCCCGTGGAGAAGACCCTGGTCACCATCACCGACCAGGCATACATCCAGCCCGAGCCCCTGGGCGTGgagCTGTACCCGGTGGTGACGGGGGGGGTGCCGGAGTCGCAGGAGCTCCTGAGGCAGCGTTTCGACCACATCTTCTACACGGGGAACAGCGCGGTGGGCCGGCTGGTGATGGAGGCAGCCGCCCGCCACCTGACCCCCGTCACCCTGGAGCTGGGCGGCAAGAGCCCCTGTTACATCAGCCCCGACTGTGACCTCAGCATCGCCTGCCGCCGGATCACCTGGGGCAAGTTCGCCAACTGCGGACAGACCTGCATCGCCCCCGACTACATCCTGTGCAACTCCAGCATCCAGGACCGGGTGGTGGACGAGATCCGACAGACACTGCAGGAGTTCTACGGCGCCGACCCCAAAGTCTCACCCGACTACGGCCGCATCATCAACCAGCGCCACTTCAGCAGGGTGATGTCACTGCTGGACGGCTGCACGGTGTCCCTAGGGGGGGGCAGCGACGAGTCCCAGTGCTACATCGCGCCCACCGTCCTCAGGGACGTGTCCCCCCACGCCAGGGTGATGCAGGAGGAGATCTTCGGGCCAGTGCTGCCCATCTTGAGCGTGAGCAGCGCGGACGAGGCGATCCGCTTCATCAATGAGCGGGAGAAGCCCCTGGCGCTGTACATCTTCTCCGCCGACAACAAGCTGATCAAGCGCATGATAGCGGAGACGTCCAGCGGGGGGGCGATGGCCAATGACGTGCTGCTGCACTACACCCTGGACTCGCTACCCTTCGGGGGCGTAGGGAACAGCGGCATCGGCAGCTACCACGGCAAGCACACCTTTGACCGGCTGAGCCACCTGCGCGGCTGCCTCATCAAGTCCCTGGCCATGGAGGGCCTGAACCAGGCACGCTACCCCCCAATGGACCCAGGGCGGCTGCGCAGGGCCCGGTTCTTCATGCAGAAGCGTGTCAGGAGCCACTGCGGTGGCTGCTGTGTCCTGGCCGTGTTCTCCTCGCTGCTGGCCCTGGGTCTGCTCATCGCCCTGCTGGTGGTCCTGCTCAAGGTACTGTGGTcaggggttgggggtgggggtctcAGATGGGGTGAAGCGGATGCTGGCGAGGGTCCAGTCAGGAGGGATCGACTGTTTTGGATGTTgttctttgtttag

Function

GO: NA

KEGG:

id description
K00128 ALDH; aldehyde dehydrogenase (NAD+)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005789 True 1323 mRNA 0.65 8 8869909 8873125

Neighbor

gene id symbol gene type direction distance location
AMCG00005790 NA coding upstream 5686 8862478 ~ 8864223 (+)
AMCG00005791 NA coding upstream 7537 8854382 ~ 8862372 (+)
AMCG00005755 NA coding upstream 93037 8772389 ~ 8776872 (+)
AMCG00005754 NA coding upstream 107839 8756975 ~ 8762070 (+)
AMCG00005757 unc119b,LOC107713212,LOC108431312,LOC107704800 coding upstream 154185 8707225 ~ 8715724 (+)
AMCG00005788 NA coding downstream 3285 8876410 ~ 8883801 (+)
AMCG00005742 NA coding downstream 24152 8897277 ~ 8904084 (+)
AMCG00005746 NA coding downstream 137059 9010184 ~ 9016738 (+)
AMCG00005745 NA coding downstream 162163 9035288 ~ 9039062 (+)
AMCG00005749 ncbp3 coding downstream 210027 9083152 ~ 9092563 (+)
G154025 NA non-coding upstream 64605 8781989 ~ 8805304 (+)
G154030 NA non-coding upstream 73485 8793827 ~ 8796424 (+)
G153955 NA non-coding upstream 139754 8729803 ~ 8730155 (+)
G153859 NA non-coding upstream 518160 8345678 ~ 8351749 (+)
G153816 NA non-coding upstream 591835 8251301 ~ 8278074 (+)
G154091 NA non-coding downstream 148825 9021950 ~ 9071747 (+)
G154143 NA non-coding downstream 220784 9093909 ~ 9094670 (+)
G154147 NA non-coding downstream 227304 9100429 ~ 9108370 (+)
G154175 NA non-coding downstream 319171 9192296 ~ 9194187 (+)
G154252 NA non-coding downstream 567368 9440493 ~ 9441381 (+)
AMCG00005787 NA other upstream 15809 8828578 ~ 8854100 (+)
AMCG00005720 NA other upstream 362812 8498502 ~ 8507097 (+)
G153815 NA other upstream 639319 8213904 ~ 8230590 (+)
AMCG00005660 LOC106603524 other upstream 1082038 7749183 ~ 7787871 (+)
AMCG00005694 NA other upstream 1535338 7307058 ~ 7334571 (+)
G154251 NA other downstream 562775 9435900 ~ 9438269 (+)
G154283 NA other downstream 714677 9587802 ~ 9589798 (+)
G154330 NA other downstream 1008257 9881382 ~ 9883955 (+)
AMCG00005802 NA other downstream 1192035 10065160 ~ 10089769 (+)
AMCG00005929 NA other downstream 1394148 10267273 ~ 10356244 (+)

Expression


Co-expression Network