AMCG00005794


Basic Information

Item Value
gene id AMCG00005794
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 8796310 ~ 8802157 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005794
CAATACGTGACGTGCTGTGCTTGGCAGATCCCCACCGCCCTGCGCAGATCTGCAACTCTGAGCCAATTACATTAAAGAACGGCGCAGATCTGAGCAGGGCGCCTGCAGGCGCCTGCGCGCAGGTACAGTAGGGTGAAGTAGCTGCTTGAACTGGCAGCTGCTCTTACTGCCCCGGAGTGTCTGCGCTGCAGGGACGGCCGGAGGAAGGGGAATAACCGCAAGAGTTGTGAAGcgaaactgtttttaattgtgaaagtgaaatgaaagaaGCGGGGCGAGTTTTGTGTTCGGCTCAGTGTGACGTCACGTTTGCTAACTTGTGAAGTTCTGTATCGCCGCGCTGGTCGTGTATAGATCCATATAGACGGGCTGCTCCGAGTGCCCGTGTGCCGCCTCTGCCACCAGCCATGTCCAGCGAGGGCGAGGGGGTCGTGGGGCAGCCGCCCGGCGAGAGCAGCGCCTGCCTGGGCAAGAGCTGCGCCGCGCTGACCGTGGACGACGTGTACGAGATCGCCAAGCTGGTCGGCGCCGAGGTGGAGAAGCTCATCGACGGCCACGGCAAGGAGAGCGCCGAGGGGCTGGTGCCCATGATCGTGCGGGTCCTGGAGCTGCTGGAGGGCTTCGCGGCGGGGCAGGGCGGCCGCTGGCCCGGGGAGGAGCTGCGCAGAGCCGTGGAGACGCTGCAGGTGCAGCAGAGGAAGCGGGGCGCGGAGGACGGGGGCAGCCGGAGCGACATCAGGTGGCGCAGTGCAGCAGAGGAGCTGGAGGCCCAGGTGACCCGGCTAAGCGAGGAAAACCAGGAGCTGCTGAGCCAGTTGAGGTGCAGCCACTCGCAGGAAGTCGTGGACAAGCAGAGGGACGAGATCCGTGCCAAAGTGCAGGAGATCAGCAGCCGGACCAAGGAGGTGGAGGCGCTGCAGGAACAGCTGGAGCGCTTCATGAAGATGAACGGGGAGCTGCGGCACAAGCAGGGCCTGGTGACGGCGCAGCTGCAGAGTGCCGCGCAGCGCCGCGCCGACCTGGAGGCCGACCTGCAGGGGGCGCACACGGAGCTGCAGCAGCTCAGGAGCCGGCTGGAAGAGGCAATGCGCGCAGCCGCCACGACGGAGATTGACCTCACGGACAAGATGGTCATCGACCTGAAGGACCCCAACCGGCCCTGCTTCACCAAACAGGAAGTGAGGGACATGCTGTTCGAGAGGAACGAGCTCAAGGCTAACCTGTTTCTGGTGCAGGAGGAGCTGTCGTACTACCAGAGGGAGATCCTGAATGAGGAGCGCTGCCCCGGGTTCCTGCTGGAGGCCATGCGCTCTGCCATCAGGAAGCAGAGGAACGTCATCAAGGCCAAGATGCTGGGGACCCCCCAGGACGAGGACAGCAGGAGCCCCACAGAACACAACGCAGGATCATGGGAGATCCTGGCCCCGGAGGAGACGGGGACGGAGAGCCCCAAATCCTCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005794 True 1463 mRNA 0.64 7 8796310 8802157

Neighbor

gene id symbol gene type direction distance location
AMCG00005792 NA coding downstream 3435 8786806 ~ 8792875 (-)
AMCG00005795 NA coding downstream 9789 8776856 ~ 8786521 (-)
AMCG00005760 NA coding downstream 25442 8764511 ~ 8770868 (-)
AMCG00005762 NA coding downstream 32161 8763907 ~ 8764149 (-)
AMCG00005759 NA coding downstream 43942 8742312 ~ 8752368 (-)
AMCG00005793 prpf8,LOC102787788 coding upstream 2994 8805151 ~ 8818446 (-)
AMCG00005796 prpf8,LOC106612861,LOC100380699,LOC107756948 coding upstream 16517 8818674 ~ 8819107 (-)
AMCG00005797 NA coding upstream 19386 8821543 ~ 8824036 (-)
AMCG00005743 LOC106523455 coding upstream 83939 8886096 ~ 8895315 (-)
AMCG00005744 NA coding upstream 104254 8906411 ~ 8933458 (-)
G154010 NA non-coding downstream 66161 8729803 ~ 8730149 (-)
G153980 NA non-coding downstream 208088 8574192 ~ 8588222 (-)
G153779 NA non-coding downstream 774670 7984240 ~ 8021640 (-)
G153778 cct6a non-coding downstream 812379 7982030 ~ 7983931 (-)
G153742 NA non-coding downstream 921268 7874787 ~ 7875042 (-)
G154126 NA non-coding upstream 185124 8987281 ~ 9024879 (-)
G154150 NA non-coding upstream 293514 9095671 ~ 9108363 (-)
G154157 blmh,LOC106612652 non-coding upstream 326613 9128770 ~ 9139826 (-)
G154234 git1 non-coding upstream 523365 9325522 ~ 9330533 (-)
G154235 NA non-coding upstream 529186 9331343 ~ 9332033 (-)
G153806 NA other downstream 671625 8091748 ~ 8124685 (-)
AMCG00005704 NA other downstream 794905 7999336 ~ 8001405 (-)
G153733 auts2 other downstream 1007989 7785554 ~ 7788321 (-)
AMCG00005685 NA other downstream 1650503 7109218 ~ 7145807 (-)
AMCG00005674 NA other downstream 2299739 6490255 ~ 6496571 (-)
G154142 NA other upstream 288265 9090422 ~ 9092573 (-)
G154250 NA other upstream 623133 9425290 ~ 9434940 (-)
AMCG00005850 NA other upstream 1493442 10295599 ~ 10352782 (-)
AMCG00005862 NA other upstream 1741377 10543534 ~ 10551355 (-)
AMCG00005839 LOC103367321,LOC107729686,LOC103398303 other upstream 1936387 10738544 ~ 10752114 (-)

Expression


Co-expression Network