AMCG00005799


Basic Information

Item Value
gene id AMCG00005799
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 10020967 ~ 10032822 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005799
ATGATACTCGAGAACCTATACAGGCTGGGTCGTTCTCGCTGTGCTGCGCAGAGCAGTATGGATGGGCTGGAGGACATGGAGAGGAAATGCAAGATCCACGTGCTCATCCTGGTCCTACATGGCGGCAACATCCTGGACACGGGCAGTGGGGACCAGAGCGCCAAGATGACCGACGTGGGCATGCTGAGCTCGGTGCTGGAGAAGGTGGCGCGGGTACACTTCCAGGCCGCGGCCGACCACGTCCTCATCAAGCTGGTGCCGTGCCCGGCCGTCTGCGCCGACGCCTTCTCGCTCGTCTCCAACCTGAACCCGTACAGCTATGATGAGAGCTGTGTGTCCAGCAGTGTTGACCACCTGCCCCTGGCGGCCCTCCCTCTCCTCGCCATCGCCTCCCCCCACTACCAGGAAGCCATCGCCACAGTGATCAGCCGAGCCAATCAGGTCTACTATGACTTCCTCAAGTCCCAGGATGGCGCGTGGTTCAGCGGACAGGTACGCGGGACAGAGGTGCACAGGTGTGTCTGGTGGGGGACTGTGTCGGGGGGGTGCTGTGTTTCGACGCCCTGTGTTTCAGCTCCAgatAACCCTGGGGAGACCAGCCCCCAGTTGAGCTCCAGCAAACGCCTCAGCAAGAGCAACATCGACCTCTCGGTGACCCAGCTGCGCCCGGCCTGCTCCCAGCTCTACAACCTGTTCCACCCGGCCGACCCCTCCGCCTCGCGGCTCGAGCCCCTGCTGCACCCGCGCTTCCACCAACTGCCCCCCTTTGCCGTGCCCCGGTACCAGCGCTACCCACTGGGTGACGGGAGATCCCAAATGCTGGAAGCGCCTGTATACAAGAGACAGCTCAGAAGAAATTCAGtttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005799 True 867 mRNA 0.62 8 10020967 10032822

Neighbor

gene id symbol gene type direction distance location
AMCG00005806 NA coding upstream 52820 9946752 ~ 9968147 (+)
AMCG00005807 med31,LOC107699947,LOC107599285,LOC107684212 coding upstream 77643 9941462 ~ 9943324 (+)
AMCG00005808 slc13a5,LOC106612936,LOC106581085 coding upstream 99897 9907846 ~ 9921070 (+)
AMCG00005768 NA coding upstream 152379 9860919 ~ 9868588 (+)
AMCG00005767 LOC103370200 coding upstream 212237 9798997 ~ 9808730 (+)
AMCG00005798 pitpnm3,LOC102785427 coding downstream 10996 10043818 ~ 10052809 (+)
AMCG00005934 NA coding downstream 99306 10132128 ~ 10136716 (+)
AMCG00005928 NA coding downstream 174498 10207320 ~ 10218325 (+)
AMCG00005927 NA coding downstream 227827 10260649 ~ 10261465 (+)
AMCG00005820 NA coding downstream 379703 10412525 ~ 10416137 (+)
G154343 NA non-coding upstream 76824 9905772 ~ 9944143 (+)
G154252 NA non-coding upstream 579586 9440493 ~ 9441381 (+)
G154175 NA non-coding upstream 826780 9192296 ~ 9194187 (+)
G154147 NA non-coding upstream 912597 9100429 ~ 9108370 (+)
G154143 NA non-coding upstream 926297 9093909 ~ 9094670 (+)
G154388 NA non-coding downstream 45485 10078307 ~ 10079436 (+)
G154447 NA non-coding downstream 252692 10285514 ~ 10332094 (+)
G154451 NA non-coding downstream 270135 10302957 ~ 10303497 (+)
G154473 NA non-coding downstream 387084 10419906 ~ 10489854 (+)
G154505 NA non-coding downstream 491145 10523967 ~ 10526052 (+)
G154330 NA other upstream 137012 9881382 ~ 9883955 (+)
G154283 NA other upstream 431169 9587802 ~ 9589798 (+)
G154251 NA other upstream 582698 9435900 ~ 9438269 (+)
AMCG00005787 NA other upstream 1166867 8828578 ~ 8854100 (+)
AMCG00005720 NA other upstream 1513870 8498502 ~ 8507097 (+)
AMCG00005802 NA other downstream 32338 10065160 ~ 10089769 (+)
AMCG00005929 NA other downstream 234451 10267273 ~ 10356244 (+)
AMCG00005851 NA other downstream 265067 10297889 ~ 10304909 (+)
AMCG00005821 NA other downstream 429715 10462537 ~ 10469406 (+)
G154486 NA other downstream 437721 10470543 ~ 10471631 (+)

Expression


Co-expression Network