AMCG00005806


Basic Information

Item Value
gene id AMCG00005806
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 9946752 ~ 9968147 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005806
GCGGTTTAAACAGACGGAAGTGGCTTTGTGGATTTGAGAGAGACTTATCGtatcgtttatttatttaaatatatgtttaattaattcgTTTTCTCCTGCGGAGTGCAGAAACACCACTTTCTGTTACCGGTCTCTGTTCCGCCCATTAACGTGGTCGACATGAGCTGCTTTTTATTGTGGTTGCGGGTCGAGTTTTGACGGTTGAAAAAGGAAGGCCATGGCTATGAAGATTGACAAGCGCCCTCAGGTGACCTTTGCGGAGGCCGGTCGGTTAAAGGGCTCCTGGGTGGCTTCGAGTGAGTATGACGCACAAGACAGGAACCAGCTTCTCTGCACTCAGCTCCAGTTTAACAGGAACGTGCCGGCGGCTCCTGTGAACCTGATGACCCAGTTCCGCAACCCCGCACCCATTGTCATTGAGAAGCTGGGCCCGCTTGGTGCTGTGGTGagcaggggggcggggggcggcAGTCTGAGCAGCTCCCACGACTCCCTGCGCTTCTCCGTGGTGTCGGAGGAGCGTCTGCAGCAGGCGGTCAGGCTGGCACAGAGGGATCTGAGGCGCCGGCACAGGGAGTCCCTGCAGAGCCCCAGCACTGCACTGTCGCCTGGCCCTAGCCCGGCAGGAAGAGCCCCCCAGAGCAGAAACGCCAAGGAACAGCACGAAGGAAAACGGGGTCAAGAGAGGAAGGCGTCGACTCCAAAGGCAGAGGTGACGAAATCTGGGGCCAGGATGTTGGTGTACACCCCTGAGAGACTCAgtcggccccccaggactgagGAGGGCCTATCACCCCCAACCCGAGACTCCGGGCCCGTGGTGGCCAGCAAGGAGCCTCCGCTCAGCCAGGAGATCCACCGGTTGCAGAGAGAGCTGGGCACCTACGTGAAAGCGATCCAGGAGGACTTGGACAAGCTGCGCTCACAGAAGATCAAGCACACAAAGAAATCCACAGCCATGGGCAGACTGGCAGCTGCTCACAGAGGGGCGGTCCGAGCCCTGCAGGTGTTCGTCAGTCAACTGCCAGACCAATCAGAGGATCCGGTGCCGTCCCACTACAAGGAGCTGGGCCATCTGATCCGCCAGCTGTCCCTGTGCACTGCCAGAGTGGAGGCGGGGCAGGGCTCCTCGGTGCCTGAGACGGCCATCGATATCTTGCACAAACTGGAGGCCAGTGAGACGCTGCTAGGCCGCCCGCTCTGGATTCTGCACTTAGTAAGCAGGATAGTCCCAGTAGAGGGGGGGCTCGAACCCGTAGCAGCTCACCCACAGAGTTCAGAGCCCCGCGTGGCCGCCGCCACAGCACATCCCCACCCCGAGGTCCCCGACCCCCAGCTACCAGAGGCAGGAGGATCAAGGGACCCCGAAAACCCACCGTGGCCAAAAAGATCTTACCAGCGGTTCAGAATGGCTGCAGCAAAGAATATTAATGAGTTTGCAGAGCGAATGGATAGAGCCAAAGAGGGGACACGGGTCGAATCGGCACAGTTTGACTTACCGTTGTCCATGACCTCCGTCACAGACAGGAAGCCCCCTGCCGTGGCCCCCTGCAGGACCGACGACCCCCCAACCCCAGAGCGCAGTGAGGTGCTCAAGGCCGGCCTGGAGACCCTCATCCGCATGGGTGCGCTGAGCGAGGGCACGCCGGGACCCTCGCAACCTCCCGCCCTGGCCAAGCACAAGGGGGTGCTGCTCCCTGCAAGGTTAAAGGGGTCTCGTCAGCCGCAGGAGCAAGGGCCCCCTCTCAGAGACACTGGCTTCCAGCAGCCCACCCTGTCCTCCAGGCTGAAGGAGAACCAGCCCCCCCAGAAAGATGCCCCCACCCCCTGgatcccccccaaccccacctcccccagGGCCTCTCCCCCGAGACGGGCTCTTCCAAAGAAACAGGGGGCTCAAGTTCTCTTCTCCCCTTCCAACATGCCGGCCGGGCCTAGCGCACAGAGGGAGACCCTGGGAGACGGCCTGGAGCCTGACAGGAGACAGCAGGCCCACAGGGAGGCCCTCAGGCAAGCCTGGCTGGATGAGGAAACAACACGCCGGCTGCGGCAACTGGGCCAGATCGCCGCTGAGGAAGCTGAGCGCATCCAGAGACTCAGGGCTGAGGCGGAATCCCCAACTCGCTGGGCAGAGAGGGCTGAAGCAGCAGCAAGAGACAGGCTGCGGCCATTACTGGACAGGGCACAGCAAATCAGCGACTCgtgggagaggaagggaagctCACTGAGACACCGGCTCTCCGTCCAGGCCGCCAACAGAACAGCAGGCAGCGCAGAGCTCCTGAGCGAGGCAATCCTGGACGACCTGCTGGACGACACCGCGCGGGCACTGTGGGCCCAGGAGCAGGACAGGCAGGCGGACAGCACCGCCCGCTCAGCTCTGCAGGGGCCCACGCTGGAGAGCATGCTGCTCAGGATGGAGGAGATGGAGaAAGACCAGGATGCCATGCGGCGCCGTTTCGCCCAGGTTGTCTACTCTGATCCGGAGATCTGGGCgaaggaggagagagcagAGGCACACGGCTCCCCTGCAGAGTACCAGCCCACTAGCCCCCGGCCCTTCAGAGTTACCAGGCCGCTGCTGAGACAGGAGCCCAGTGTGGATATCGTGCTGGAGCCCCCGATGGAGACCAGCCTGGCCGAGGAGCTGATGTCCGAGGTGCTGGCTGACGTCACTGCCGAATTCCAGGACATGTGTGAGGAATATGCGGAGGCCGTCTTCACCTCCGAGTTCCTGCAGCCAATAGAATCCCCCACTGGCCTCCCTCCCGGAACCAGCCAGCCAATACAAACCTTCACTTCCTAGCCCTTCAGAACAGTGTCGGGGGAAAAACCGCCAGCCAATGAGATTCCAGTAGACTCAATGCGTTTGTTTGTTACCAGCAAGACCAGCCAATGAGATTGCTATTTCCAATGCGCATTGCATTAGCAGCCAATAGAATCCTTTGTTCCTCTTTCCTGTGGGCTTTTAAAAATGCCCCGACTGACTGTTGTGAGCTGAACAGTACAGGACTCCCGTTGTCTCGGCTGATTGAAGGAACATAATTGTTCCAGCGCAAGGAAATCTCCAGAGGCAGCCCGGATAATTAGCAAATCTAAGCCTGTTTGAAAATGCGAGCGCTGTTAccagacatttaattaaatcccGTTCTTCATATTTGCCagtgccaataaaaaaaaaacgaaaaaaactCTGATGTCGAATCAATAGTCTGGGGCCCACACGAGTGCAGAGCATTATATTCGAGCAGCAACAGCCTTGTCATCTCAGGCCCCGGTGCCGGCCGCGGGACTCCCGACCCTGGGAATAGGTGAGCGGCGATAGATTGGACTGAATTATGTTTCAACAGGACGTGTCGAGGGAAatgaaaagattaata

Function

GO: NA

KEGG:

id description
K21765 MNR; protein moonraker

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005806 True 3383 mRNA 0.59 18 9946752 9968147

Neighbor

gene id symbol gene type direction distance location
AMCG00005807 med31,LOC107699947,LOC107599285,LOC107684212 coding upstream 3428 9941462 ~ 9943324 (+)
AMCG00005808 slc13a5,LOC106612936,LOC106581085 coding upstream 25682 9907846 ~ 9921070 (+)
AMCG00005768 NA coding upstream 78164 9860919 ~ 9868588 (+)
AMCG00005767 LOC103370200 coding upstream 138022 9798997 ~ 9808730 (+)
AMCG00005763 NA coding upstream 519208 9425307 ~ 9427544 (+)
AMCG00005799 NA coding downstream 52820 10020967 ~ 10032822 (+)
AMCG00005798 pitpnm3,LOC102785427 coding downstream 75671 10043818 ~ 10052809 (+)
AMCG00005934 NA coding downstream 163981 10132128 ~ 10136716 (+)
AMCG00005928 NA coding downstream 239173 10207320 ~ 10218325 (+)
AMCG00005927 NA coding downstream 292502 10260649 ~ 10261465 (+)
G154343 NA non-coding upstream 2609 9905772 ~ 9944143 (+)
G154252 NA non-coding upstream 505371 9440493 ~ 9441381 (+)
G154175 NA non-coding upstream 752565 9192296 ~ 9194187 (+)
G154147 NA non-coding upstream 838382 9100429 ~ 9108370 (+)
G154143 NA non-coding upstream 852082 9093909 ~ 9094670 (+)
G154388 NA non-coding downstream 110160 10078307 ~ 10079436 (+)
G154447 NA non-coding downstream 317367 10285514 ~ 10332094 (+)
G154451 NA non-coding downstream 334810 10302957 ~ 10303497 (+)
G154473 NA non-coding downstream 451759 10419906 ~ 10489854 (+)
G154505 NA non-coding downstream 555820 10523967 ~ 10526052 (+)
G154330 NA other upstream 62797 9881382 ~ 9883955 (+)
G154283 NA other upstream 356954 9587802 ~ 9589798 (+)
G154251 NA other upstream 508483 9435900 ~ 9438269 (+)
AMCG00005787 NA other upstream 1092652 8828578 ~ 8854100 (+)
AMCG00005720 NA other upstream 1439655 8498502 ~ 8507097 (+)
AMCG00005802 NA other downstream 97013 10065160 ~ 10089769 (+)
AMCG00005929 NA other downstream 299126 10267273 ~ 10356244 (+)
AMCG00005851 NA other downstream 329742 10297889 ~ 10304909 (+)
AMCG00005821 NA other downstream 494390 10462537 ~ 10469406 (+)
G154486 NA other downstream 502396 10470543 ~ 10471631 (+)

Expression


Co-expression Network