AMCG00005811


Basic Information

Item Value
gene id AMCG00005811
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 9870078 ~ 9890583 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005811
CTGCCAATATTGAGGACAGGAAATCTCTCCTGCTGCACATTTGCCCTTTTCTGTCTTCCAATTTTAGGCTGGATAGCTGGATCTCCCAACAATTCAACAAGGACGAAGCCTCTACCTCCCTAGAAGAAGGAACTGAGCCTCCCATGCACATCTCACTCATCCCTCTGATAACCAGCATCCCCATACTGCCAGAGGCTACAGAAGTACCCACCACTCCTAGGGTCATTCCGGACCCCACTCATGACCTTCTGGAGGTTTTCCATGGGACGCCACCCACTACCCAGGATACTTCATCAGAAGAGGACCAGCAGGGTGAATGTCAGGGCGATGAGCTGGGCGCCGAGGCCAAGAGGGAGTTAGGGGTGGCCATAATGAAGTTTGGCCTGGAGCTCCTCCAGCACGTGCAGGCCAGCCCAGAACAGCCCAACGTGATGGTGTCTCCGCTCAGCGTGGCTTTGGGGCTGTCCCAGCTGGCACTGGGGGCCGCAAATGAgacagagactctgctgttgaAGGCTCTGCATGTGGACGCGCTGCCTTGCTATCACAGTGTCATGAAGAGCCTCCTCCATGACATCACCCAGAGTGCACTGCAGGTGGCCACACGCATCTACCTGCGCCCAGGGTTCCAAGTCAAAAAGGCGTTTGAGGAGGAGTCATTGCGTCTGTACGGCTCGGAGCCCACCCCCCTGACCAGCATCGAGGAGGTCAACAGCTGGGTGAAGGAGGCCACCAAGGGCCAGATTCCCAAGTTCCTGACCAGCCTGCCGGGCAACATGCTGCTGATGCTGATCAACGCCGTGCACTTCAAAGGCATGTGGCGTGCTCGCTTCGACCCACGCTTCACCTCCAACGACCTCTTCTATATTGACTCCAAGACCACCGTCCCCGTCGACATGATGCTGGGGCCCAAGTATCCCCTCAGCCTGCTGATCCACAATGAGCTGGAGGCCCAGGTGGCTCGGTTTCCATTCATGGGGAATATGAGTCTGCTGGTGATCCTCCCGATGTCTGGGCATGTCAATGTCGCCACCATCGCTGCCCACCTCAACGCTTCAGAGCTGTATAGCCGCTTCCCCCGCGAACGCACCATGCAGGTCAAGCTGCCCAAACTCAACCTGAAGTACAATGAGGAGCTCCAGAATGCCCTGACAGGCATGGGGTTGGGTGAGCTGTTCTTGGGTCCTGATCTGTCTCGGATTGGAGATGGCCCCATGATGGTGTCCAACGTGAAGCACGAAGCCGCCATGGAGCTGAACGAGGAGGGGGCGGAGGCGTCGGCCACCACCTCGATCGTCATCTCGCGCTCCAACCCCACCTTCAGCGTCAACCAGCCCTTCCTCTTTGCCATAATGGACGATGAGACGCAGACGCCGCTCTTCCTGGGTATAGTCAAGAACCCCAACCCGGAAGCAATGCCCCTCCAGAAGGGGGACCCCGACAAAATGGGCTTCGCTGGTAGAAATCATGTCGCAAGCTCCTACGACCCCAAGTACTGCGCTCTGACGTCACTGTGTGACGTCAGAGCGCAGCTGGGCTGGATAAAAAGAGTCGGGACTGCAGAAGCAGCCAGCTGTTCTTGTCCCAGCGAAGGCCAGGAGACATTGGTCCCAGCTAGAGGAACTTATCGCAACAAAGCCTTGCTTGCAGGAGCCAGGATGCCCAAGATCTCCCTGCTACTGTGCCTGGGGGCCCTGTTCTCCCTCGCCAGCGCACAGCTGGAGCCTGAGGAGGGAGGCCCCGAGGAGGAAGTGGAAATGTTCACCACCCCAACAACCAAGATGGCCGCCGCTACTTCCGACTTTGGTTACAACCTCTTCCGCCAGCTGACGGCCCAGGACCCCCAGGCTAGCGTGTTCCTGTCACCCCTCAGCATCTCCTTGGCGCTGACACAGCTCTCCATGGGAGGCTCTGAACAGGCTGAGAAGCAGCTGCACAGGGTCCTCCGGTACCACACCCTGCAGGACAGCCAGCTGCACACCACCCTGAAGGACCTGGCATCCAGTGTCCAAGCCCCCGGCAAGGGCCTGAGCTCGGCCTCGCGAGTCTACCTGGAGAGGAGACTGGGGATGAAGCAGGAATTCCCCGACGCCGTGGAGCGTCAGTACGGCGTGCGGCCCAAGGTGCTGGCTGGCCCTCCCCGCAGCTTCCTGAAGGAGATCAATGATTGGGTGAAGCAACAGACTGGCGGGAAGATCGACCGCTTCCTGACCTCTTTCCCTCGCAACGTGGGCATTCTGCCACTGGGCGCCGCCTACTTCAAAGGTCAGTGGGTGACTCGCTTTGGCCAGACCAACAAGATGGAGTCCTTCCAGTTAGAGGGGTCAGCACCAGCACGTATCGCACAGGTGAAGATGCAGGGAGACGTCAGCATGCTGGTGTTCCTGCCCGATGAAGTCACTAAGAACATGACCCTGATCGAGGAGAGCCTGTCGGCAGAGTTTGTGCAGGACACCATTGGCGCCCTGCAGCCCGtcgaggtctccctctccctgcctaACCTCAAACTCAGCTACTCCACCAATCTGCTCACCTCCCTCTCTGACATGGGCCTGAACGAGTGGCTGGCCAACACAGACCTGGTGAAGATCACCTCGCAGGCAGCGAAGGTGAGCCAAGTTCCACACAAGGTGGTGCTGGAGATGTCGCACGAGGGCGGGCAGCCTGTGCTCAGTGGGTCGCGTCCGGATGGGCAGTCCCTGGCCCTGTCCTTCCAGGTGGACCGTCCCTACGTGTTTGTGGTGCGGGACGAGACCTCGGGCGCCCTGCTCTTCGTGGGGAAGGTGCTGGACCCCCGCAAGCTGGGCCGCGTCTGAGAGACACGCCCACGGGAAACGCTACTCTCCACGGCGACACTGTCTATACACAGCTCACTTACCCCTCGCACCGGGCACCTCCGTTAGCTGCCATATGAGACACAGACTCAGTATAGATTAAACACGAGCATCCCAACCACACACTAGACCCTTCGGCATcgaaaagcacaagaaaaactGTTGTCAAAGCACAACATACTGCCCTCAGCAATCTAACCTCAAAGAAGACAGCATTCAGTCAAGACAAAGCTAGTAACAAATTGGTAGAATATATACTTTGCACACGGAACCAACGAACAGAACAGCAAAATCTCGCACAAACTCATTTGGCAATCTGCATGCTGCCCTAGAGTAAGGGAAAGTTAATCAAACCAGATGAACTGCCCTTAACATACAAGCAGACACAGAAACACGCACACAGGGATCTCCAACTGCCACACAACTAAAGAGGATCCCCATTGTATCAACTGTAGCACAGCCCAAAAAATGCGGTTCCTTTATTCCAAAACCAGTGTCCCGTGGTGCTACTGAAAGCAAGCTTTCCTCTGGGGCTTTTTCTGAAGTATCTTTTTAAATGGGATTTATCTTTTTAGATGGGATTTGCCTTTTTATATGTTCTAATACCAACACGAGTTTTGGAATTGGTTTCCCTGCCCCATGGGAAATGTAATAATTGGAAACCTTGCCTTTACACTGAAGTGTAGTGCTAAAACCAGCTTGGCTATCTTTGGGTTAGAATTATATTATcctcaaataatgtttttgtttgttattttaatgggattcgttgttaaaaataaaaacagatatcaAACATTTACA

Function

GO:

id name namespace
GO:0030162 regulation of proteolysis biological_process
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG:

id description
K03983 SERPINF2, AAP; alpha-2-antiplasmin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005811 True 3638 mRNA 0.55 16 9870078 9890583

Neighbor

gene id symbol gene type direction distance location
AMCG00005769 NA coding downstream 9154 9838157 ~ 9860924 (-)
AMCG00005781 NA coding downstream 190993 9673690 ~ 9679085 (-)
AMCG00005782 NA coding downstream 230595 9633784 ~ 9639483 (-)
AMCG00005780 LOC103366110 coding downstream 244449 9609091 ~ 9625629 (-)
AMCG00005770 NA coding downstream 280298 9587799 ~ 9589780 (-)
AMCG00005810 NA coding upstream 1075 9891658 ~ 9906312 (-)
AMCG00005809 txndc17,txd17 coding upstream 53108 9943691 ~ 9946696 (-)
AMCG00005800 NA coding upstream 168338 10058921 ~ 10065450 (-)
AMCG00005801 NA coding upstream 178541 10069124 ~ 10081209 (-)
AMCG00005933 NA coding upstream 205561 10096144 ~ 10099516 (-)
G154280 NA non-coding downstream 297170 9572215 ~ 9572908 (-)
G154260 NA non-coding downstream 432179 9435880 ~ 9437899 (-)
G154237 NA non-coding downstream 476745 9343755 ~ 9393333 (-)
G154235 NA non-coding downstream 538045 9331343 ~ 9332033 (-)
G154234 git1 non-coding downstream 539545 9325522 ~ 9330533 (-)
G154391 NA non-coding upstream 198971 10089554 ~ 10091616 (-)
G154399 NA non-coding upstream 246845 10137428 ~ 10138925 (-)
G154400 NA non-coding upstream 253900 10144483 ~ 10144931 (-)
G154575 NA non-coding upstream 685387 10575970 ~ 10576502 (-)
G154642 NA non-coding upstream 799565 10690148 ~ 10693965 (-)
G154250 NA other downstream 435138 9425290 ~ 9434940 (-)
G154142 NA other downstream 777505 9090422 ~ 9092573 (-)
G153806 NA other downstream 1745393 8091748 ~ 8124685 (-)
AMCG00005704 NA other downstream 1868673 7999336 ~ 8001405 (-)
G153733 auts2 other downstream 2081757 7785554 ~ 7788321 (-)
AMCG00005850 NA other upstream 405016 10295599 ~ 10352782 (-)
AMCG00005862 NA other upstream 652951 10543534 ~ 10551355 (-)
AMCG00005839 LOC103367321,LOC107729686,LOC103398303 other upstream 847961 10738544 ~ 10752114 (-)
G154677 ef2,eef2,LOC106613766,LOC101482186,LOC107384141,LOC108427162,LOC108414462,LOC102796634 other upstream 953258 10843841 ~ 10912745 (-)
AMCG00005831 shdb,LOC107719565,LOC107676987,LOC107729709,LOC103027120,LOC106584413,LOC108439278 other upstream 958932 10849515 ~ 10865796 (-)

Expression


Co-expression Network