AMCG00005819


Basic Information

Item Value
gene id AMCG00005819
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 10423109 ~ 10428966 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005819
ATGACAGagcgGGTGAATAACTTCCCCCCGTTGCCACGCTGTGTGCCACTGAAGCCCTGTTTCTATCAGGACATCGCGGTGGAGATCCCTGAACAGCACCAGCTGCTTGTCCGCAGGGTCTACTACCTGTGGACCTTGTATTCGGTGACCCTGGTGGTGAACCTGGTGTCCTGTGTGGCGTGGTGGGCCGGTGGGGGCAGCGGTGCCAATTTCGGGCTGGCTCTGGTCTGGCTGCTGCTGTTCAGCCCCTGCAGCTATGTGTGCTGGTTCCGCCCGCTGTACAAAGCCCTCAGggctgaCAGCTCATTTAACTTCATGGCGTTCTTCTTCATCTTCGCAGCGCATAATGTGGGTGCGGCCGTGGTGATGCTGCTGTCTGCTGTGATGTTCACTGTGGTGGCTGTGTTCATGGGTGTGGTGCTGCTCCGGgtgcaCCGGCTGTACCGCGGCGGGGGGGGCAGTCTACAGCAGGCGAAGGACGAGTGGAGCAGCGGGGTGTGGCGCAGTGCCCCGGTGAGGGACGCCAGCTTCCAGGCCATCTCTGGCGCTGGATCCACACTACCCCAGTACCCGGTCGCCGTGCCCAGCTACCCCAGCAACACACAGTGGTGA

Function

GO: NA

KEGG:

id description
K19995 SCAMP; secretory carrier-associated membrane protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005819 True 612 mRNA 0.62 6 10423109 10428966

Neighbor

gene id symbol gene type direction distance location
AMCG00005820 NA coding upstream 6972 10412525 ~ 10416137 (+)
AMCG00005927 NA coding upstream 161644 10260649 ~ 10261465 (+)
AMCG00005928 NA coding upstream 204784 10207320 ~ 10218325 (+)
AMCG00005934 NA coding upstream 286393 10132128 ~ 10136716 (+)
AMCG00005798 pitpnm3,LOC102785427 coding upstream 370300 10043818 ~ 10052809 (+)
AMCG00005817 cactin,LOC106600017 coding downstream 2597 10431563 ~ 10436502 (+)
AMCG00005818 mpnd,LOC106591182,LOC107717566 coding downstream 51244 10480210 ~ 10486749 (+)
AMCG00005858 NA coding downstream 73541 10502507 ~ 10502822 (+)
AMCG00005856 NA coding downstream 74612 10503578 ~ 10507292 (+)
AMCG00005857 NA coding downstream 91890 10520856 ~ 10523831 (+)
G154447 NA non-coding upstream 91015 10285514 ~ 10332094 (+)
G154451 NA non-coding upstream 119612 10302957 ~ 10303497 (+)
G154388 NA non-coding upstream 343673 10078307 ~ 10079436 (+)
G154343 NA non-coding upstream 478966 9905772 ~ 9944143 (+)
G154252 NA non-coding upstream 981728 9440493 ~ 9441381 (+)
G154505 NA non-coding downstream 95001 10523967 ~ 10526052 (+)
G154574 NA non-coding downstream 147013 10575979 ~ 10576437 (+)
G154583 NA non-coding downstream 239032 10667998 ~ 10668261 (+)
G154722 NA non-coding downstream 568683 10997649 ~ 10999389 (+)
G154775 NA non-coding downstream 745429 11174395 ~ 11180237 (+)
AMCG00005929 NA other upstream 66865 10267273 ~ 10356244 (+)
AMCG00005851 NA other upstream 118200 10297889 ~ 10304909 (+)
AMCG00005802 NA other upstream 333340 10065160 ~ 10089769 (+)
G154330 NA other upstream 539154 9881382 ~ 9883955 (+)
G154283 NA other upstream 833311 9587802 ~ 9589798 (+)
AMCG00005821 NA other downstream 33571 10462537 ~ 10469406 (+)
G154486 NA other downstream 41577 10470543 ~ 10471631 (+)
G154499 NA other downstream 83538 10512504 ~ 10516390 (+)
AMCG00005835 LOC107586405 other downstream 250971 10679937 ~ 10714707 (+)
AMCG00005834 LOC108271164,LOC108430094,LOC107393192,LOC107719559,LOC107699414 other downstream 292786 10721752 ~ 10736626 (+)

Expression


Co-expression Network