Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00005837 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 10696777 ~ 10697001 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00005837 | True | 225 | mRNA | 0.63 | 1 | 10696777 | 10697001 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005803 | NA | coding | upstream | 63345 | 10626449 ~ 10633432 (+) |
| AMCG00005804 | LOC106613805,LOC101170792,LOC103364385 | coding | upstream | 73768 | 10615882 ~ 10623009 (+) |
| AMCG00005857 | NA | coding | upstream | 172946 | 10520856 ~ 10523831 (+) |
| AMCG00005856 | NA | coding | upstream | 189485 | 10503578 ~ 10507292 (+) |
| AMCG00005858 | NA | coding | upstream | 193955 | 10502507 ~ 10502822 (+) |
| AMCG00005836 | aes,chico,LOC103379965,LOC106574496,LOC107558286 | coding | downstream | 4009 | 10701010 ~ 10712559 (+) |
| AMCG00005833 | NA | coding | downstream | 148535 | 10845536 ~ 10846858 (+) |
| AMCG00005826 | sirt6,LOC107667852 | coding | downstream | 185618 | 10882619 ~ 10886247 (+) |
| AMCG00005867 | eef2b,ef2,LOC106613766,LOC107552698 | coding | downstream | 209356 | 10906357 ~ 10912672 (+) |
| AMCG00005868 | NA | coding | downstream | 222947 | 10919948 ~ 10923547 (+) |
| G154583 | NA | non-coding | upstream | 28516 | 10667998 ~ 10668261 (+) |
| G154574 | NA | non-coding | upstream | 120340 | 10575979 ~ 10576437 (+) |
| G154505 | NA | non-coding | upstream | 170725 | 10523967 ~ 10526052 (+) |
| G154473 | NA | non-coding | upstream | 206923 | 10419906 ~ 10489854 (+) |
| G154447 | NA | non-coding | upstream | 364683 | 10285514 ~ 10332094 (+) |
| G154722 | NA | non-coding | downstream | 300648 | 10997649 ~ 10999389 (+) |
| G154775 | NA | non-coding | downstream | 477394 | 11174395 ~ 11180237 (+) |
| G154815 | dot1l | non-coding | downstream | 665004 | 11362005 ~ 11362233 (+) |
| G154816 | NA | non-coding | downstream | 673423 | 11370424 ~ 11370912 (+) |
| G154831 | NA | non-coding | downstream | 681779 | 11378780 ~ 11379289 (+) |
| G154499 | NA | other | upstream | 180387 | 10512504 ~ 10516390 (+) |
| G154486 | NA | other | upstream | 225146 | 10470543 ~ 10471631 (+) |
| AMCG00005821 | NA | other | upstream | 227371 | 10462537 ~ 10469406 (+) |
| AMCG00005929 | NA | other | upstream | 340533 | 10267273 ~ 10356244 (+) |
| AMCG00005834 | LOC108271164,LOC108430094,LOC107393192,LOC107719559,LOC107699414 | other | downstream | 24751 | 10721752 ~ 10736626 (+) |
| G154636 | LOC108435919,LOC108271001 | other | downstream | 216396 | 10913397 ~ 10915729 (+) |
| AMCG00005840 | LOC100304646,LOC107384145 | other | downstream | 309797 | 11006798 ~ 11010354 (+) |
| G154756 | NA | other | downstream | 386160 | 11083161 ~ 11086011 (+) |
| G154798 | NA | other | downstream | 622963 | 11319964 ~ 11361770 (+) |
