AMCG00005852


Basic Information

Item Value
gene id AMCG00005852
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 11180934 ~ 11190305 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005852
ATGTCCTTAGGGAACCCCCCAAACCCAGAGGCCCCagACCTGCCCTGGGAAGTGAGAGCCAATGACAGGAGCTTCCACCAGCGCCTGCAGAAGAGGTCCCTCCTGTGTCTCCGCTGGGGGCGGTACGCGGACAATGTGATGCGCAGCCACAAGTACACCCTCCTCTCCTTCCTGCCGCTTAACCTGTTCGAACAGTTCCAGCGCGCAGCCAACATCTACTTCCTGCTCATGGTCATCCTGCAGtCGGTGCCGGCTGTGTCCACGCTGCCCTGGTACACCACCATGGTGCCGCTGCTGATGGTGCTGTCTGTGAGGGCCGGCAAGGACCTGGCGGCTGACCTGGCTCGGCGTCGCAGCGACAGAGAGATCAACAACCGGCCCTGTGCCATCCTGACCAGAGACAGGTTCAGCAGCGCTCGGTGGAGGGACATCGTGGTGGGGGATGTGGTGCGGCTGCAGAAGGACGCGGTGATCCCGgcCGATCTCCTCCTCCTGCGCAGCTCAGAGCCCCACAGCCTGTGTTATGTGGAGACGGCCGACATTGACGGGGAGACGAACCTGAAGTTCCGCCAGGCAGTACCCATCACCCACCAGGAGCTAGAGTCAGAGAGCAGCCTGCCGGCCTTCCAGGGCTGCGTGCGCTGTGAGGAGCCCAACAGCAGGCTGCACTCGTTCGTGGGAGTGTTGCAGTGGCGGGGCGGGCGCCACCTGCTGGACGGCCAGTGCGTTCTCCTGCGCGGCTGCGTCTTGCGCAACACCGACACGGCCTACGGCCTGGCTCTGTACACAGgtgCAGACACTAAGATCCTGCAGAACTCTGGGCGCTTCCTGGTGAAGAAGAGTCATGTTGAGCTGCTCCTCAACCGGGCTGTCATTGCGATCGTGCTGCTTCTTCTGGGGACGGCCCTGCTCCTGGCGGTGGGGGCAGGGGTGTCTGCTGGCGGGGTGTGGGGCTCCAGTGGGCCGCTGGCCGGGATGTGGTGGGGCCAGGTACCAGTGTACACGGCCTTCCTCACCTTCTGGGGCTACATCATCCTCCTCGGCCCCGCCATGCCCATGGCACTGTACATCACGTTTGAGGTGATCCACCTGCTTCACAGCCTGCTGATTTCCTGGGATCTGGAGATGTACGAGGAGAAGTCAGATACTCCCGCAGGGGCTCACAGCTCCACCCTGAACGAGGAGCTGGGGCAGGTGGAGTTCCTGCTGACGGACAAGACCGGCACGCTCACTGAGAATCGACTGGTGTTTCGGCAGTGCTGCATCGCCGGCACGATCTACGGTGATCCCTACCCCGCCCCGCCCCAGCCTGTATTCCCACCACTGTGCTACACTGTAccgcacagcacagcagtgtcAGAGTTCAGAATAAACCATCTGAGCGTTgagCGGCAGCAGTTCTCTGACCCCCGCCTGAAGGAGCAGCTGAGGAGCCGGCGCTGCCCCGAGGTGTGGGAGTTCTGCAGGGCCCTGGCGCTGTGCCACACTGTGATGGTGGAGTGGAAAgatgGGACCCCGGTGTTCCAGGCAGCCTCCCCAGACGAGGAGGCCCTGGTGGGGGCGGCGCAAGGCCTGGGATGGGTCTTCCAGTCTCGAACCCGGGACTCGATAAGCCTGGACGAACTGGGTCGACCGCGGCTATACAAGCTGCTCACCATCCTGGACTTCAGCAGCCAGCGGAGGCGCATGTCTGTGCTcgtgcGGGAGCCGGAGGGCGGGCTGAAGCTGTACTGTAAAGGTGCAGACACGGCGGTGCTGGAGCGGCTGAGAGAGGACTGTCCGCACCGAGAGGATGCCGAGGTCGCGCTGCAGgtgttCTCTGAGAGCTGTCTGCGGACGCTCTGTGTGGCAATGCGCCCTGTCACTGAGGCATCATGGGAGCAGTGGAGCCAGGCCCTCCAGCTGGCCGCCATGAAAACGCATCACAGTGACGACCAACTGGAGGTGGTGTACGACAGCATGGAGAGAGAGCTGACGctcctgGGGGTGACAGCGATTGAGGACCGGCTGCAGGAGGGGGTTCCCGAGACCATCGCCTCCCTGCAGCAGGCCGGCATCAAGGTGTGGATGCTCACCGGAGACAAGAGAGAGACTGCAGTGAACATTGGATACTCCTGCAGATTGCTGGACAGCAACAGCACAATACTGCAGGGAGACGAGCTGAGGTGGGACAGACTGTCGGACACACTGACccaGGAGCTCCTCCAGTCACCAGAGCTGGAAAATACCCCACCCCCAGACAAGACAGAGAGCTGGTGGGGCAAACAGAGAGGGGGGTCCAATGGATCCAAAACTGCATTAGTCATCACTGGACCTGAACTGctgGAGCTGGGTAGGGCTGGGGTGTGGGGGACGCGGTTCATGTCGTTGGCACAGCAGTGTCAGTCGGTGCTGTGTTGCCGGGTGACACCGGGGCAGAAGGCCGGGGTGGTCCAGCTGGTCCGGAAACACACCAGGGCCGTCACCATGGCCATTGGAGACGGAGCCAATGACTGCTCTGATTTCTCCCTGCCACGCTTCCGCTGCCTGCGGCGCCTCCTGCTGGTGCACGGACGCTGGTCCTACCACCGCGTCACCCGCTTCCTGCGCTACTTCCTCTTCAAGACCACCTCCTTTGCCCTCGTCCACACCTGGTTCTCCTTCTTCAATGGCTTCAGCGCCCAGCCCATGTATGAGAACTGGTTCATCACGCTGTACACGGTGCTGTACACTGCGCTGCCCATCTTCTGCCTGGCTGTGCTGGAGCAGCTGTTCAACCCCTGGCTGCTGGGCGCCACACTCCTCCACTCCCTCTACGCCTCCCTGGTGCTCTTCTTCCTCCCGCTCGGTGTCTTCTCCGACTCCGCCCTCGACTACCAGACCCTTGCCGTCACTGTGGGGACCTCCGCCATCTTCACCGCCACAGCCGAGatcGTGCTGCAGACAGGGTTCTGGACACGGTACAATGTGTGGGCGCTGTGTCTCAGCCTGGTCCTGTATTTCCTGGTTACCTTCCTCCTGCACAGCCCCCGCTTCCACCAGGCTGCCCCCCTTGACTACTACTTCCCTGgggTGGCGGTCAATGCTTTGTCCAATCCACTGGTGTGGCTGACCGTGCTGTTGACAGGATGCATGGCTgtgcACAGTTCAGATCGCAGTGTGTCCCTGGGAACTGTGGAGATGCGCTCTGGTTTCCAGAGGGGCAGTTCTCAGCGGTGTTCGTCGTACGCCCTGTCTCAGGGGCGGGGCTTTGGGAAGCTGATCAACTCGGGCGCCAGCCTGCGCAGCACAGTGCCCCAACAGGATGGAAGGGGAACTGCAGGCACAGCGACACCCGAGAAGCCGCAGACTTAG

Function

GO: NA

KEGG:

id description
K14802 DRS2, ATP8A; phospholipid-transporting ATPase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005852 True 3333 mRNA 0.62 26 11180934 11190305

Neighbor

gene id symbol gene type direction distance location
AMCG00005814 map2k2 coding downstream 87392 11082498 ~ 11093542 (-)
AMCG00005845 NA coding downstream 103320 11064028 ~ 11077614 (-)
AMCG00005843 NA coding downstream 149850 11013677 ~ 11031084 (-)
AMCG00005842 mbd3,LOC106613771,LOC105011554,LOC108430109,LOC101480296,LOC103354193,LOC104920733 coding downstream 186613 10988152 ~ 10994321 (-)
AMCG00005841 NA coding downstream 194710 10982585 ~ 10986224 (-)
AMCG00005855 LOC108427150,LOC107696585,LOC108280165,LOC107552683,LOC107724989,LOC107549819,LOC100151059 coding upstream 72769 11263074 ~ 11266410 (-)
AMCG00005878 NA coding upstream 109307 11299612 ~ 11306670 (-)
AMCG00005882 NA coding upstream 141467 11331772 ~ 11334954 (-)
AMCG00005880 dot1l,LOC107593341,LOC107729667 coding upstream 170852 11361157 ~ 11367917 (-)
AMCG00005881 NA coding upstream 179955 11370260 ~ 11372316 (-)
G154745 NA non-coding downstream 102733 11001674 ~ 11078201 (-)
G154723 NA non-coding downstream 181552 10997777 ~ 10999382 (-)
G154715 NA non-coding downstream 197454 10979558 ~ 10983480 (-)
G154675 NA non-coding downstream 362218 10802564 ~ 10818716 (-)
G154642 NA non-coding downstream 486969 10690148 ~ 10693965 (-)
G154782 NA non-coding upstream 16726 11207031 ~ 11208176 (-)
G154791 NA non-coding upstream 93823 11284128 ~ 11284398 (-)
G154817 NA non-coding upstream 119393 11309698 ~ 11319984 (-)
G154848 NA non-coding upstream 225512 11415817 ~ 11416388 (-)
G154906 NA non-coding upstream 378968 11569273 ~ 11613611 (-)
G154677 ef2,eef2,LOC106613766,LOC101482186,LOC107384141,LOC108427162,LOC108414462,LOC102796634 other downstream 268189 10843841 ~ 10912745 (-)
AMCG00005831 shdb,LOC107719565,LOC107676987,LOC107729709,LOC103027120,LOC106584413,LOC108439278 other downstream 315138 10849515 ~ 10865796 (-)
AMCG00005839 LOC103367321,LOC107729686,LOC103398303 other downstream 428820 10738544 ~ 10752114 (-)
AMCG00005862 NA other downstream 629579 10543534 ~ 10551355 (-)
AMCG00005850 NA other downstream 828152 10295599 ~ 10352782 (-)
AMCG00005876 oaz1,oaz1s other upstream 129955 11320260 ~ 11325068 (-)
AMCG00005877 sf3a2 other upstream 146290 11336595 ~ 11339135 (-)
AMCG00005879 dot1l,LOC106920479 other upstream 158940 11349245 ~ 11360874 (-)
AMCG00005875 NA other upstream 184170 11374475 ~ 11376538 (-)
AMCG00005989 NA other upstream 1478951 12669256 ~ 12675994 (-)

Expression


Co-expression Network