Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00005858 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 10502507 ~ 10502822 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00005858 | True | 291 | mRNA | 0.66 | 2 | 10502507 | 10502822 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005818 | mpnd,LOC106591182,LOC107717566 | coding | upstream | 15758 | 10480210 ~ 10486749 (+) |
| AMCG00005817 | cactin,LOC106600017 | coding | upstream | 66005 | 10431563 ~ 10436502 (+) |
| AMCG00005819 | NA | coding | upstream | 73541 | 10423109 ~ 10428966 (+) |
| AMCG00005820 | NA | coding | upstream | 86370 | 10412525 ~ 10416137 (+) |
| AMCG00005927 | NA | coding | upstream | 241042 | 10260649 ~ 10261465 (+) |
| AMCG00005856 | NA | coding | downstream | 756 | 10503578 ~ 10507292 (+) |
| AMCG00005857 | NA | coding | downstream | 18034 | 10520856 ~ 10523831 (+) |
| AMCG00005804 | LOC106613805,LOC101170792,LOC103364385 | coding | downstream | 113060 | 10615882 ~ 10623009 (+) |
| AMCG00005803 | NA | coding | downstream | 123627 | 10626449 ~ 10633432 (+) |
| AMCG00005837 | NA | coding | downstream | 193955 | 10696777 ~ 10697001 (+) |
| G154473 | NA | non-coding | upstream | 12653 | 10419906 ~ 10489854 (+) |
| G154447 | NA | non-coding | upstream | 170413 | 10285514 ~ 10332094 (+) |
| G154451 | NA | non-coding | upstream | 199010 | 10302957 ~ 10303497 (+) |
| G154388 | NA | non-coding | upstream | 423071 | 10078307 ~ 10079436 (+) |
| G154343 | NA | non-coding | upstream | 558364 | 9905772 ~ 9944143 (+) |
| G154505 | NA | non-coding | downstream | 21145 | 10523967 ~ 10526052 (+) |
| G154574 | NA | non-coding | downstream | 73157 | 10575979 ~ 10576437 (+) |
| G154583 | NA | non-coding | downstream | 165176 | 10667998 ~ 10668261 (+) |
| G154722 | NA | non-coding | downstream | 494827 | 10997649 ~ 10999389 (+) |
| G154775 | NA | non-coding | downstream | 671573 | 11174395 ~ 11180237 (+) |
| G154486 | NA | other | upstream | 30876 | 10470543 ~ 10471631 (+) |
| AMCG00005821 | NA | other | upstream | 33101 | 10462537 ~ 10469406 (+) |
| AMCG00005929 | NA | other | upstream | 146263 | 10267273 ~ 10356244 (+) |
| AMCG00005851 | NA | other | upstream | 197598 | 10297889 ~ 10304909 (+) |
| AMCG00005802 | NA | other | upstream | 412738 | 10065160 ~ 10089769 (+) |
| G154499 | NA | other | downstream | 9682 | 10512504 ~ 10516390 (+) |
| AMCG00005835 | LOC107586405 | other | downstream | 177115 | 10679937 ~ 10714707 (+) |
| AMCG00005834 | LOC108271164,LOC108430094,LOC107393192,LOC107719559,LOC107699414 | other | downstream | 218930 | 10721752 ~ 10736626 (+) |
| G154636 | LOC108435919,LOC108271001 | other | downstream | 410575 | 10913397 ~ 10915729 (+) |
| AMCG00005840 | LOC100304646,LOC107384145 | other | downstream | 503976 | 11006798 ~ 11010354 (+) |
