AMCG00005866


Basic Information

Item Value
gene id AMCG00005866
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 11558449 ~ 11562627 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005866
CTCTCCAGAGTCAACTCGGGAAGTTCTCACCCTGTTTTCCTCTTGCAGATCCGATGGGAGAAGAACATCACGCTAGGGGAGCCGCCCGGATTCCTGCACTCGTGGTGGTGGTATGCCAGCTGTTACTTCACAAAACAGGTTCCCCCTAGTCTGCCTCCGAGTGTGTCTGAGTTCACCTGTGCTGACCTTGTGTTCTCGGACGTTTTCACAAGCTCCATTGTATTCTGGGACTTGTACTGTGCCGCCCCAGACCGGCGGGAGACCTGCGAACATTCCAGTGAGGCCAAGGCCTTCCACGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005866 True 300 mRNA 0.56 3 11558449 11562627

Neighbor

gene id symbol gene type direction distance location
AMCG00005865 NA coding upstream 51012 11495141 ~ 11507437 (+)
AMCG00005908 NA coding upstream 72066 11477695 ~ 11486383 (+)
AMCG00005906 clg08h19orf60,cssa23h19orf60,LOC108439285,LOC107729673,LOC107676986,LOC103025814,LOC107593355 coding upstream 97706 11457498 ~ 11460743 (+)
AMCG00005874 plekhj1 coding upstream 214845 11339604 ~ 11343604 (+)
AMCG00005873 NA coding upstream 227328 11324831 ~ 11331121 (+)
AMCG00005885 NA coding downstream 120182 11682809 ~ 11686775 (+)
AMCG00005864 NA coding downstream 128194 11690821 ~ 11691592 (+)
AMCG00005883 celf5,LOC106956403 coding downstream 239805 11802432 ~ 11824637 (+)
AMCG00005896 NA coding downstream 369557 11932184 ~ 11935207 (+)
AMCG00005898 NA coding downstream 373222 11935849 ~ 11938386 (+)
G154879 NA non-coding upstream 69935 11486492 ~ 11488514 (+)
G154863 NA non-coding upstream 92824 11449480 ~ 11465625 (+)
G154847 NA non-coding upstream 142120 11416065 ~ 11416329 (+)
G154831 NA non-coding upstream 179160 11378780 ~ 11379289 (+)
G154816 NA non-coding upstream 187537 11370424 ~ 11370912 (+)
G154908 NA non-coding downstream 51043 11613670 ~ 11614369 (+)
G154915 NA non-coding downstream 69464 11632091 ~ 11638019 (+)
G154916 NA non-coding downstream 75697 11638324 ~ 11638774 (+)
G154917 NA non-coding downstream 77059 11639686 ~ 11639926 (+)
G154979 zmp:0000000521,LOC107696078,LOC107596226,LOC105888700 non-coding downstream 344014 11906641 ~ 11912100 (+)
AMCG00005907 LOC105011584,LOC103026129,LOC106584418,LOC104949087,LOC106613791 other upstream 148777 11406306 ~ 11409672 (+)
G154798 NA other upstream 196679 11319964 ~ 11361770 (+)
G154756 NA other upstream 472438 11083161 ~ 11086011 (+)
AMCG00005840 LOC100304646,LOC107384145 other upstream 548095 11006798 ~ 11010354 (+)
G154636 LOC108435919,LOC108271001 other upstream 642720 10913397 ~ 10915729 (+)
AMCG00005886 ssbp4,LOC107588873,LOC107690032,LOC107721784,LOC107676978,LOC107729707 other downstream 39275 11601902 ~ 11610151 (+)
AMCG00005895 NA other downstream 340725 11903352 ~ 11906087 (+)
AMCG00005987 NA other downstream 1129189 12691816 ~ 12709543 (+)
AMCG00005984 timm13,LOC106573564,LOC107731338,LOC107587003,LOC106613710,LOC107593051 other downstream 1149151 12711778 ~ 12714571 (+)
AMCG00005935 LOC105903927,LOC107660390,LOC105900968,LOC108427173,LOC107596281,LOC102310619 other downstream 1331493 12894120 ~ 12895452 (+)

Expression


Co-expression Network