Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00005881 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 11370260 ~ 11372316 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00005881 | True | 741 | mRNA | 0.65 | 4 | 11370260 | 11372316 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00005880 | dot1l,LOC107593341,LOC107729667 | coding | downstream | 2343 | 11361157 ~ 11367917 (-) |
| AMCG00005882 | NA | coding | downstream | 35306 | 11331772 ~ 11334954 (-) |
| AMCG00005878 | NA | coding | downstream | 63590 | 11299612 ~ 11306670 (-) |
| AMCG00005855 | LOC108427150,LOC107696585,LOC108280165,LOC107552683,LOC107724989,LOC107549819,LOC100151059 | coding | downstream | 103850 | 11263074 ~ 11266410 (-) |
| AMCG00005852 | NA | coding | downstream | 179955 | 11180934 ~ 11190305 (-) |
| AMCG00005910 | NA | coding | upstream | 7246 | 11379562 ~ 11392009 (-) |
| AMCG00005914 | LOC106584417 | coding | upstream | 37351 | 11409667 ~ 11412189 (-) |
| AMCG00005913 | cpamd8,LOC106584419 | coding | upstream | 45578 | 11417894 ~ 11448583 (-) |
| AMCG00005909 | NA | coding | upstream | 77770 | 11450086 ~ 11451494 (-) |
| AMCG00005911 | NA | coding | upstream | 81432 | 11453748 ~ 11457225 (-) |
| G154817 | NA | non-coding | downstream | 50276 | 11309698 ~ 11319984 (-) |
| G154791 | NA | non-coding | downstream | 85862 | 11284128 ~ 11284398 (-) |
| G154782 | NA | non-coding | downstream | 162084 | 11207031 ~ 11208176 (-) |
| G154745 | NA | non-coding | downstream | 292059 | 11001674 ~ 11078201 (-) |
| G154723 | NA | non-coding | downstream | 370878 | 10997777 ~ 10999382 (-) |
| G154848 | NA | non-coding | upstream | 43501 | 11415817 ~ 11416388 (-) |
| G154906 | NA | non-coding | upstream | 196957 | 11569273 ~ 11613611 (-) |
| G154909 | NA | non-coding | upstream | 241358 | 11613674 ~ 11614383 (-) |
| G154954 | NA | non-coding | upstream | 317424 | 11689740 ~ 11690048 (-) |
| G155003 | NA | non-coding | upstream | 559796 | 11932112 ~ 11932947 (-) |
| AMCG00005879 | dot1l,LOC106920479 | other | downstream | 9386 | 11349245 ~ 11360874 (-) |
| AMCG00005877 | sf3a2 | other | downstream | 31125 | 11336595 ~ 11339135 (-) |
| AMCG00005876 | oaz1,oaz1s | other | downstream | 45192 | 11320260 ~ 11325068 (-) |
| G154677 | ef2,eef2,LOC106613766,LOC101482186,LOC107384141,LOC108427162,LOC108414462,LOC102796634 | other | downstream | 457515 | 10843841 ~ 10912745 (-) |
| AMCG00005875 | NA | other | upstream | 2159 | 11374475 ~ 11376538 (-) |
| AMCG00005989 | NA | other | upstream | 1296940 | 12669256 ~ 12675994 (-) |
| AMCG00005992 | NA | other | upstream | 1306089 | 12678405 ~ 12711136 (-) |
| AMCG00006063 | ctxn1,LOC108441290,LOC106573568 | other | upstream | 1471449 | 12843765 ~ 12854803 (-) |
| AMCG00005936 | march2 | other | upstream | 1524238 | 12896554 ~ 12971406 (-) |
