AMCG00005882


Basic Information

Item Value
gene id AMCG00005882
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 11331772 ~ 11334954 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005882
ATGTGGACAGGCTGTGTGTGGGCTGTGATCCTGCCGGTTTGTGCCGGGCCTCTTCTCTCTGGAGCAGCCATGTGGGGGGACGGCGAGACAGATGGTGCCTCAAACCTGGACCTCAAGCCAGCATCTCTCAGTGCAGGAGGCGGCGAGGAGGACAGGGAAGGCGAGGTGGCAGCTGCCGGGTCGTCTCCCCTCCCGGCCTGGCTCAGAGAGGACAGAGCCGACACAGAGAAGACCAACCTGCCTCTGCCGGGCGTGGAGGTAGACCCGGGGGCGGCCCGAGCCAGAGTGGTCCTGGCAGAGCTGCGCCGGGCCTGGGGTGAAGGAAACCGGGCAGAGCAAAGGGGCTTGGCGCGGCTCGGAGTGTGCTCTGATGGAGGGGCTGATACCACTGCTGTGATTAAGGCCCTGTCGGCACTTGTGACTCCACTGGACCCCCGGGAGGGAGAGAGTTTGGAGGCTGATGTTCTGTATCCCACTAAAGAGCactgggaggaggagggagagaagaacaGATGGAGACTCACTCTGCAGTTCACACTGTCTCCCCCACAGCGCCCCCTGCTGCCCGGGCTGACCCCGCTGCTGCTGTTCTCTCTGAGAGGGGGCATCATGAAAAAGGCCCTGACCATCTCCTTCACTGCGCACCCCCCTCACACCGACACACAGACCACATGTGTTTCCGAGGACACGCAGTTCATCGTTCTCACTGGAGgcctggcacaaacccacgccCACGGGCACTTAATGTTCCGGGTTGCGATACAGACACACCACACAGACAGCGGACCAGTCCTGTCTCTGTCAGACCTGAAGGGGTTCCTGTCAGGGGAAGACAAGGAGCATAACGCCACCCTGAGCCCCGTGCTGCTGCTCAACAGacgggcagggagagagagcccTGGCTCGGGCCCTGCTGAAGACAGGGCGGCGCCCGAGCTGACCCCTCACCGCGGCTCAGGCACTTTCCGCTTCCTGCTCGAGCTCCAGGAGTTCCTGAGGGAAGTCCTGCCCCCCTCGGGGAAGGAGCAGCACCCCCCCAACACTGAGGCGGGCACGGAGGAGCCTCCAACAGGCCACCCCAGCATGCTGTTCCTGAACATGCTGCAGTCTGCGCCCACGGTACCCCTCGGCCCCTCCACGGGCGAGGGGCTCCTCCTGTCCCTGCTCAACTCCTCCACGCCCATGCTGTTCAGCTTCCCGCGTCACCCCAGTGCCCTGTTGGCCCACCGTGGGGAGCTGGCCCTGTCCCCCCACCTTCTGGCCATCCTGAGGGTCCGCCTGGATGCCGCTTTGGCAGAGGTTGGGCTGCAGGGGCGAGTAAAGAGCCAGAGCGCCCGAGACAGGCTGCGCACACTGCTGGAGCTCAGCACCTTGCCACCAGAGGGCAGCACTGACACCACAGCCACCTCTACGCAGACAGGGCCCCCCAGCGAGAGGCAGTACCGCGCTGTCCTGCTGCTCACCGCCCTGCGCACGGTGCGGACAGCCTGGGAGCGCTGGGGCCAAGAGGACGAGGAGGAGCAGCCGTGGGGGGGGGCGGGCCGGGGCCGGCGGGGGGCGGGGGAGCGGTGCCGGCTGCAGACCCTGCGCACGTCGCTGAGGGGGTTCCAGAACATCCTGAGCCCCGACTCCATGCTCATCAACAACTGCCAGGGGGCCTGCCGCTTCCCCCAGACCGGCGGGGGGGACAGCTACAACAACCACGTGGTGCTGCTGATCCGGCAGCAGGAGCTGGGCCCCCCGCTGCAGCGGCCGCCCTGCTGCGTGCCGGTGCGCTACAGCGAGTACGAGGTGGCCGTGGTGACGGACAGTGGCTCAGCCGCCGTCGCCAAGGCTAACATGGTGGCCGAGGAGTGCGGCTGCCGCTGA

Function

GO: NA

KEGG:

id description
K04665 AMH; anti-mullerian hormone

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005882 True 1869 mRNA 0.66 7 11331772 11334954

Neighbor

gene id symbol gene type direction distance location
AMCG00005878 NA coding downstream 25102 11299612 ~ 11306670 (-)
AMCG00005855 LOC108427150,LOC107696585,LOC108280165,LOC107552683,LOC107724989,LOC107549819,LOC100151059 coding downstream 65362 11263074 ~ 11266410 (-)
AMCG00005852 NA coding downstream 141467 11180934 ~ 11190305 (-)
AMCG00005814 map2k2 coding downstream 238230 11082498 ~ 11093542 (-)
AMCG00005845 NA coding downstream 254158 11064028 ~ 11077614 (-)
AMCG00005880 dot1l,LOC107593341,LOC107729667 coding upstream 26203 11361157 ~ 11367917 (-)
AMCG00005881 NA coding upstream 35306 11370260 ~ 11372316 (-)
AMCG00005910 NA coding upstream 44608 11379562 ~ 11392009 (-)
AMCG00005914 LOC106584417 coding upstream 74713 11409667 ~ 11412189 (-)
AMCG00005913 cpamd8,LOC106584419 coding upstream 82940 11417894 ~ 11448583 (-)
G154817 NA non-coding downstream 11788 11309698 ~ 11319984 (-)
G154791 NA non-coding downstream 47374 11284128 ~ 11284398 (-)
G154782 NA non-coding downstream 123596 11207031 ~ 11208176 (-)
G154745 NA non-coding downstream 253571 11001674 ~ 11078201 (-)
G154723 NA non-coding downstream 332390 10997777 ~ 10999382 (-)
G154848 NA non-coding upstream 80863 11415817 ~ 11416388 (-)
G154906 NA non-coding upstream 234319 11569273 ~ 11613611 (-)
G154909 NA non-coding upstream 278720 11613674 ~ 11614383 (-)
G154954 NA non-coding upstream 354786 11689740 ~ 11690048 (-)
G155003 NA non-coding upstream 597158 11932112 ~ 11932947 (-)
AMCG00005876 oaz1,oaz1s other downstream 6704 11320260 ~ 11325068 (-)
G154677 ef2,eef2,LOC106613766,LOC101482186,LOC107384141,LOC108427162,LOC108414462,LOC102796634 other downstream 419027 10843841 ~ 10912745 (-)
AMCG00005831 shdb,LOC107719565,LOC107676987,LOC107729709,LOC103027120,LOC106584413,LOC108439278 other downstream 465976 10849515 ~ 10865796 (-)
AMCG00005839 LOC103367321,LOC107729686,LOC103398303 other downstream 579658 10738544 ~ 10752114 (-)
AMCG00005862 NA other downstream 780417 10543534 ~ 10551355 (-)
AMCG00005877 sf3a2 other upstream 1641 11336595 ~ 11339135 (-)
AMCG00005879 dot1l,LOC106920479 other upstream 14291 11349245 ~ 11360874 (-)
AMCG00005875 NA other upstream 39521 11374475 ~ 11376538 (-)
AMCG00005989 NA other upstream 1334302 12669256 ~ 12675994 (-)
AMCG00005992 NA other upstream 1343451 12678405 ~ 12711136 (-)

Expression


Co-expression Network