AMCG00005890


Basic Information

Item Value
gene id AMCG00005890
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 11615392 ~ 11616813 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005890
ATGGGGGAGCCCCGGGAGTACCTGTCAGATGGGAGCCCGCTGATCCAGGCGGCCCAGCTGGGGAGGCTGCGGCTGGTGCGTCTGCTGGTGGAGGGTGGTGCCCAGGTGAACGAGCGCAACCAGCGGGGGGAGACGGCCCTGGCGGCGGCCTGCAGAGGGACACGGCCCCTGCCCGAGCGGCTGAAGCTGCTGAGGTTCCTGCTGGAGCATGCGGCCGACCCCAACGCCCAGGACAAGGCGGGCCGCACGGCACTGATGTACGCCTGCATGGAGAAGGCCGGGCCGGAGGTGTCTGCCCTGCTGCTGGAGCACGGGGCCGACCCCGGCCTGGAGGACTACGGGGGGGCGTCGGCGCTGGTGTACGCGGTCAATGCCAGGGAGCCAACCACTCTGCAGGTGCTGCTGGACGGCTGCAGGCAACGCGGCCGCGACATCCTCATCATCGCCAGCCGCCTGGGCTCCTCGGGCCACCCCGTCACCAAGCGCTACCTGAACGCACCGCCCTCGCCGGACTATGAGGGGGGATGTGAGGGCGGCCGCTGCTCCTCCCCCGTGTCCTGCATGTCCCCCTCCGAGATCGAGCTCAAGACCAGCTCCCCCGGTTCGCCCGGCTCTGAGGGGGACAACATCTTCAGCTTCCGGGGCGCCAGCAAGAGGGGCTCGGTGGAGAATGAGCTGCTGCCCCCGGACTGGAACCCGCCCCATGGCCGCCGCCTGCGCTCTGAGCCCTGGCTGGCCATCCGCAACCTGTCCCACCTCCGCAGCGCCTATGAGGAGAGCCTAAGACGGGGGAGCaggcaggaggaggaagagggagacccaggagaaggaggagatTTGTCCGCCGATCTTGAAGGCCTGGCAGTGTCCAGGAGGGCCTCGGTTTGTCAACTCCTTGACTCCACTGCCGCAGAACGAGCCCAGCCTCTGGGAGCAGGCGGTAGGCAGGTGTCCAGGAAACCCTCCTTCGAGAAGCTGCCGCCATCCACCAAGACCCTGCTGCCGGACCGCAGGAACACGCTGCCAACCGTCCAGCCCAGTGGCGACCCCCTGCGCCTGCCTTCCCTGGTGCTGGACCCCTGTCCCCCCGATTCCCACTGCCAGATCAGCCAGCTCAGCCCAGGCTGGAAGGGCCACGCCTCCTCCTCACCCAACTGGAGGTCCTCCTCCCTGGAGTCATCCGACTGGCAGGCGATGGAGCCGTCGTCTGCCCGACCCTTCCTCCCTCCGCTCCCGGCCGGCCCGTCTCTGCTCTACTCCCCCGCCCCGCCCCAGATGCCGCTGCCCTGCCCCTCCCCCCGGCCCCTGCTCTGCAGCTCCAAGGCTGTTGGAGGCCGGCGGGGAGCGATGCAGCGCCGGCACTCAATCCAGGCGGAGCAGCTGAAGCACATGGGCGGCTACGATGAGATCCTGATCCTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005890 True 1422 mRNA 0.69 1 11615392 11616813

Neighbor

gene id symbol gene type direction distance location
AMCG00005912 NA coding downstream 145632 11463610 ~ 11469760 (-)
AMCG00005911 NA coding downstream 158167 11453748 ~ 11457225 (-)
AMCG00005909 NA coding downstream 163898 11450086 ~ 11451494 (-)
AMCG00005913 cpamd8,LOC106584419 coding downstream 166809 11417894 ~ 11448583 (-)
AMCG00005914 LOC106584417 coding downstream 203203 11409667 ~ 11412189 (-)
AMCG00005887 isyna1,LOC107671814,LOC107549817,LOC107726320 coding upstream 5615 11622428 ~ 11627932 (-)
AMCG00005888 ell,LOC106613783 coding upstream 20325 11637138 ~ 11649322 (-)
AMCG00005891 NA coding upstream 53540 11670353 ~ 11674352 (-)
AMCG00005889 NA coding upstream 58322 11675135 ~ 11680822 (-)
AMCG00005884 rgma,LOC103371300 coding upstream 221188 11838001 ~ 11863038 (-)
G154909 NA non-coding downstream 1009 11613674 ~ 11614383 (-)
G154906 NA non-coding downstream 1781 11569273 ~ 11613611 (-)
G154848 NA non-coding downstream 199004 11415817 ~ 11416388 (-)
G154817 NA non-coding downstream 295408 11309698 ~ 11319984 (-)
G154791 NA non-coding downstream 330994 11284128 ~ 11284398 (-)
G154954 NA non-coding upstream 72927 11689740 ~ 11690048 (-)
G155003 NA non-coding upstream 315299 11932112 ~ 11932947 (-)
G155058 NA non-coding upstream 386327 12003140 ~ 12023672 (-)
G155059 NA non-coding upstream 390655 12007468 ~ 12017366 (-)
G155073 NA non-coding upstream 508348 12125161 ~ 12126128 (-)
AMCG00005875 NA other downstream 238854 11374475 ~ 11376538 (-)
AMCG00005879 dot1l,LOC106920479 other downstream 254518 11349245 ~ 11360874 (-)
AMCG00005877 sf3a2 other downstream 276257 11336595 ~ 11339135 (-)
AMCG00005876 oaz1,oaz1s other downstream 290324 11320260 ~ 11325068 (-)
AMCG00005831 shdb,LOC107719565,LOC107676987,LOC107729709,LOC103027120,LOC106584413,LOC108439278 other downstream 749596 10849515 ~ 10865796 (-)
AMCG00005989 NA other upstream 1052443 12669256 ~ 12675994 (-)
AMCG00005992 NA other upstream 1061592 12678405 ~ 12711136 (-)
AMCG00006063 ctxn1,LOC108441290,LOC106573568 other upstream 1226952 12843765 ~ 12854803 (-)
AMCG00005936 march2 other upstream 1279741 12896554 ~ 12971406 (-)
AMCG00005939 LOC100697221 other upstream 1303310 12920123 ~ 12949967 (-)

Expression


Co-expression Network