AMCG00005895


Basic Information

Item Value
gene id AMCG00005895
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 11903352 ~ 11906087 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005895
CGTCTCTACCGGAAGTCGAAGGTTGTTTTCGATGAGGAATCTTTATTGACAAGCTAGAGGACAACACATTGACAGGACCTTTCTGGAGTTGTCCTTGCGAAGTGCATGTGGCGTTGTAGGAGTCCGTAGcgctatatatagatatattcatTTAGTCTTGTTTCCGGTTTTGTcagtattatatttgttttcgcTTCGCTGTTGGATTGATGGCTCCCAGGATTTTCCCCCTAGTAAAGCTGGTGACCAAGGTAGGCGTGGCAGGGGGGGCAGTGTATGTGGCCTATGACCAGGGCCTGCTGGGGGGCAGTGCCCAGGGTTCGGAAGTGCTAAACAAGGCCAAAGCTGCAATCCCCCCAGCAGTGGATGAGTGGATGAAGTATCTGGGATGGGAGcTTCCTGCACCTCCAAAAATAGAGTTCTCCCCTTCTGAAACATGGAACTCCGGCGTCCAGAAGACGATGTCTGCCCTCTCCGTGGCCCCCACGAGAGCCTGCGAGTACAGCAGTCGAGGGGTCCAATACCTGAAAGAGCTGGCCAAGTGAAAAGCATGCACATACCTGTCACGCTTCCTGGCTGCTGCCGCCGATCCAATTTAAAGACCGAAACTCCTCAAGCAATCACCCTCAGAGCGCCCATGAACCGCCTTACCTCTTCCATTCCGCTCCATTTGAAGTCCTCCTCTTTTTCTCCAACAAACAGCAGGGTCAGGGGAAAAACAACCTAAGACATGACAGACAGGTGGGACGGAATGAAAGGGATGAGGTTGCCTGATCCCCGATTTGAAGAATTGCGAAACTGGTCTTCAGAATCTGCAGCAGCTGTGGATCTCTCATTCCTGAGCTTTATGTTACATAATTGAGGTCCCTTTTTTTGTTAGCTGGCCAAACAAACATTGTGTTCAGTCATTTCACCATTGatgatgtaaatatatttactaatCCCAAGGTTTATGCATCTGGGGGCCAGATTTGCTCAAATGGCCTAGTCTATAAttagcccccttgcattgcACTGCGTTGTCAAATGAAGAATTCGGATGATTTCGAAGGGAAGTATTTTTGTTCCAAGCTGTTATTTAATCACactttctttttagttttttcatggTTCAAGAaaagctttgtttatttgtacttaGAAAGCATCCCAGGCTGGGAATCGCACAAAAGCATGACCCAATGTCTGATTCTTGCAAAGCACTTGATGTCAGAATTGGCAGCATCTTGTAATActacagatgtatttttcagGGGTTCGGTTGAACAAAACTGCTGGTACCTGCGTTGAAAGAGCTGCAAGTAGGAGAGTCCCGCTGTAAAAGCGTGTATTACTGAATGCATTTGATATGTCTCGAAGAACAAGAACTGACGAAGTTCTCACTCTGGATCTCTCTCTCATCCAATTCCACTTGAAAACACCTTATTTTGTGCTATTAACCTGTATAACAACTGTACCTATCTGTAAATAACTAAATGCTACCATCTTTACAGTAACAGTGTCAAAAATAAGACGCTTCAGTCTACATGAGCTAGGAGGTTTGGTCTCTAAATGGCTTGATCagtgacaataaaaaataaaataaaaataaaaatctgctgTGTTTTGCTTAATGAAAGGGAATTCTACAGGGTTTCAACAAACTATTAAACTATTCCATATcacaattcaatacattttatttatatcaccAGGGCATCCATTTGGAAACCATGAACATATCTCTAAGATGTCCTATCAGGCAGAGCAGAGGGGTCACAATGTATTTTGAGCTAGCACTGTGTAAAGAATATCACTGAATTAAAGACCTG
>TU195202
AGGAATCTTTATTGACAAGCTAGAGGACAACACATTGACAGGACCTTTCTGGAGTTGTCCTTGCGAAGTGCATGTGGCGTTGTAGGAGTCCGTAGcgctatatatagatatattcatTTAGTCTTGTTTCCGGTTTTGTcagtattatatttgttttcgcTTCGCTGTTGGATTGATGGCTCCCAGGATTTTCCCCCTAGTAAAGCTGGTGACCAAGGTAGGCGTGGCAGGGGGGGCAGTGTATGTGGCCTATGACCAGGGCCTGCTGGGGGGCAGTGCCCAGGGTTCGGAAGTGCTAAACAAGGCCAAAGCTGCAATCCCCCCAGCAGTGGATGAGTGGATGAAGTATCTGGGATGGGAGcTTCCTGCACCTCCAAAAATAGAGTTCTCCCCTTCTGAAACATGGAACTCCGGCGTCCAGAAGACGATGTCTGCCCTCTCCGTGGCCCCCACGAGAGCCTGCGAGTACAGCAGTCGAGGGGTCCAATACCTGAAAGAGCTGGCCAAGTGAAAAGCATGCACATACCTGTCACGCTTCCTGGCTGCTGCCGCCGATCCAATTTAAAGACCGAAACTCCTCAAGCAATCACCCTCAGAGCGCCCATGAACCGCCTTACCTCTTCCATTCCGCTCCATTTGAAGTCCTCCTCTTTTTCTCCAACAAACAGCAGGGTCAGGGGAAAAACAACCTAAGACATGACAGACAGGTGGGACGGAATGAAAGGGATGAGGTTGCCTGATCCCCGATTTGAAGAATTGCGAAACTGGTCTTCAGAATCTGCAGCAGCTGTGGATCTCTCATTCCTGAGCTTTATGTTACATAATTGAGGTCCCTTTTTTTGTTAGCTGGCCAAACAAACATTGTGTTCAGTCATTTCACCATTGatgatgtaaatatatttactaatCCCAAGGTTTATGCATCTGGGGGCCAGATTTGCTCAAATGGCCTAGTCTATAAttagcccccttgcattgcACTGCGTTGTCAAATGAAGAATTCGGATGATTTCGAAGGGAAGTATTTTTGTTCCAAGCTGTTATTTAATCACactttctttttagttttttcatggTTCAAGAaaagctttgtttatttgtacttaGAAAGCATCCCAGGCTGGGAATCGCACAAAAGCATGACCCAATGTCTGATTCTTGCAAAGCACTTGATGTCAGAATTGGCAGCATCTTGTAATActacagatgtatttttcagGGGTTCGGTTGAACAAAACTGCTGGTACCTGCGTTGAAAGAGCTGCAAGTAGGAGAGTCCCGCTGTAAAAGCGTGTATTACTGAATGCATTTGATATGTCTCGAAGAACAAGAACTGACGAAGTTCTCACTCTGGATCTCTCTCTCATCCAATTCCACTTGAAAACACCTTATTTTGTGCTATTAACCTGTATAACAACTGTACCTATCTGTAAATAACTAAATGCTACCATCTTTACAGTAACAGTGTCAAAAATAAGACGCTTCAGTCTACATGAGCTAGGAGGTTTGGTCTCTAAATGGCTTGATCagtgac

Function

GO: NA

KEGG:

id description
K24624 MICOS13; MICOS complex subunit MIC13

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005895 True 1811 mRNA 0.44 4 11903352 11906087
TU195202 False 1534 TUCP 0.45 4 11903386 11905844

Neighbor

gene id symbol gene type direction distance location
AMCG00005883 celf5,LOC106956403 coding upstream 78715 11802432 ~ 11824637 (+)
AMCG00005864 NA coding upstream 211760 11690821 ~ 11691592 (+)
AMCG00005885 NA coding upstream 216577 11682809 ~ 11686775 (+)
AMCG00005866 NA coding upstream 340725 11558449 ~ 11562627 (+)
AMCG00005865 NA coding upstream 395915 11495141 ~ 11507437 (+)
AMCG00005896 NA coding downstream 26097 11932184 ~ 11935207 (+)
AMCG00005898 NA coding downstream 29762 11935849 ~ 11938386 (+)
AMCG00005897 NA coding downstream 46274 11952361 ~ 11972073 (+)
AMCG00005903 rnf126,LOC102780338,LOC107569633 coding downstream 90737 11996824 ~ 12003499 (+)
AMCG00005904 NA coding downstream 107441 12013528 ~ 12017391 (+)
G154917 NA non-coding upstream 263426 11639686 ~ 11639926 (+)
G154916 NA non-coding upstream 264578 11638324 ~ 11638774 (+)
G154915 NA non-coding upstream 265333 11632091 ~ 11638019 (+)
G154908 NA non-coding upstream 288983 11613670 ~ 11614369 (+)
G154879 NA non-coding upstream 414838 11486492 ~ 11488514 (+)
G154979 zmp:0000000521,LOC107696078,LOC107596226,LOC105888700 non-coding downstream 554 11906641 ~ 11912100 (+)
G155017 NA non-coding downstream 64737 11970824 ~ 12207954 (+)
G155018 fstl3 non-coding downstream 78576 11984663 ~ 11986924 (+)
G155053 NA non-coding downstream 295649 12201736 ~ 12203472 (+)
G155182 NA non-coding downstream 541393 12447480 ~ 12447684 (+)
AMCG00005886 ssbp4,LOC107588873,LOC107690032,LOC107721784,LOC107676978,LOC107729707 other upstream 293201 11601902 ~ 11610151 (+)
AMCG00005907 LOC105011584,LOC103026129,LOC106584418,LOC104949087,LOC106613791 other upstream 493680 11406306 ~ 11409672 (+)
G154798 NA other upstream 541582 11319964 ~ 11361770 (+)
G154756 NA other upstream 817341 11083161 ~ 11086011 (+)
AMCG00005840 LOC100304646,LOC107384145 other upstream 892998 11006798 ~ 11010354 (+)
AMCG00005987 NA other downstream 785729 12691816 ~ 12709543 (+)
AMCG00005984 timm13,LOC106573564,LOC107731338,LOC107587003,LOC106613710,LOC107593051 other downstream 805691 12711778 ~ 12714571 (+)
AMCG00005935 LOC105903927,LOC107660390,LOC105900968,LOC108427173,LOC107596281,LOC102310619 other downstream 988033 12894120 ~ 12895452 (+)
AMCG00005964 gpx4b,gpx4,LOC107723219,LOC107660382 other downstream 1119677 13025764 ~ 13033408 (+)
G155637 eps15l1,LOC107592720 other downstream 2191717 14097804 ~ 14098696 (+)

Expression


Co-expression Network