AMCG00005911


Basic Information

Item Value
gene id AMCG00005911
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 11453748 ~ 11457225 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005911
CCATGGCAAAGATCCACAGATAGGCGGAGTTGGCGCTCTTGTATAGAGAGGGGATCTCTGGCCATGGCGTCCAGGAGGGTTTCCAGCGTTAACTTTCACAAAGCTGCGGCCGGGGACTCGACCAACTCTAGGGATGGGAGTCACAACACCGGGAACGGCAGCACAACCACGAAGAAAGCAAAACCAGCTGGTAAAATAGTGAAGTCTCGCTATATGCAGACGACGGAGAAGAAGCCAACTTCGAAGAACACTTCGATCAACCAGTCAATTTCCGTGGTGCCACGGCCAGGCACGCCCACCAAACTGGGAGCCCCCAACAAGCCCAGTTCGGGCACCCCCACTCGGCGCTCCATGGCCCCGCAGTCCATTGCCACGCCTTTCTCCATGATGTCCAGTATGCTGGAGCCCTCCCAGCCGGGAATAAACGTCCTCCAGTCCACCATTCTGGACGGTCACTGCTTTCGTCCGGAATTTGACGTCTCTTCTATTAATGAAAAGGCTGTAATGGAGAACGCGGCTGATCCTGAGGAAGTGAAAGAGATGCTAGAAAATCAAACCTTCCTGTTGGCCTATCTGACATCAAAGATTGAGAATAACACACAGCGGCTGAGGGAGGAGGCGGAGAGGTGTCTGCTGGCGgtgatggaggaggaggagagactgCGGTCAGCCGTCCAAGAGAAGAAACGACAGTTCCTGCTGCGGGAGAAGGAGAGGCAGCTGGACGACCTGCTGGATCTGCAGATCGCAGTCCTGACACCCGTGGTTGCGGCCGCCGATCAGTTCAAGCAACAGTACAAGGCGTTCGCCACCGCAGTGGACACCACGCGCCACGAGCTGCCAGTCCACAATGTTCAAATGGAGGGTGACAGGAAGGAGTTCCTAGGCCGGGCGGAGACGTGTTTGCGGGAGACGGAGTGCCTGCTGCGGGAGGCGTGGGTGCAGCCGACTGCGGGCGATCAGGAGAGAGCTGGCTCATTGCTGAAGGAGGTGAAGGAGACGGCGCAGGAGATTGACAAGGAGCTGGCCAGGGGTTTTGCAGATGTGCTGGAGCTAGACGCCCTCGTCAGCCAGCAGGCTGCGCAGCTGCAGCACAGCCGGGAGGAGGAGGCTGTGGGTATGACCAGGGCAGAGACGCTGTACTTCCCCCGACAGTGAAgcttgcagtgttttgttttccaaggcAGCCTGGTGTgcagcccccccacccttccACACTTTATGAACTCTTTGACTTATGATGACACAGCTGGAGAGCTTTTGTATTGTGATTATAAATGTAGTAAAGTTGTGATTTTTATAGCTGTTTGTCTATCTAgcacgtgtgtgtatataacatgAGTAAACGTGCTAATGTAAAAATTGATTCCttttttaactattttgttAGTGCAGAGCACTAGTAATGCAGTAGTACTGACTGTAATTAGAGCAAAACAAATGGGAGATGTCTTTTTCAATGTACTCACCTTTTATTGGATTGTCTTATGTAtcatttgtgtaaatattgtaaaaatataatttttccacatttatgaTGTATCCCTTCTATATGTTCTATGGGGTTAAAGGTCACTTAATTCAGTAActg

Function

GO: NA

KEGG:

id description
K16591 HAUS8; HAUS augmin-like complex subunit 8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005911 True 1591 mRNA 0.52 10 11453748 11457225

Neighbor

gene id symbol gene type direction distance location
AMCG00005909 NA coding downstream 2254 11450086 ~ 11451494 (-)
AMCG00005913 cpamd8,LOC106584419 coding downstream 5165 11417894 ~ 11448583 (-)
AMCG00005914 LOC106584417 coding downstream 41559 11409667 ~ 11412189 (-)
AMCG00005910 NA coding downstream 61739 11379562 ~ 11392009 (-)
AMCG00005881 NA coding downstream 81432 11370260 ~ 11372316 (-)
AMCG00005912 NA coding upstream 6385 11463610 ~ 11469760 (-)
AMCG00005890 NA coding upstream 158167 11615392 ~ 11616813 (-)
AMCG00005887 isyna1,LOC107671814,LOC107549817,LOC107726320 coding upstream 165203 11622428 ~ 11627932 (-)
AMCG00005888 ell,LOC106613783 coding upstream 179913 11637138 ~ 11649322 (-)
AMCG00005891 NA coding upstream 213128 11670353 ~ 11674352 (-)
G154848 NA non-coding downstream 37360 11415817 ~ 11416388 (-)
G154817 NA non-coding downstream 133764 11309698 ~ 11319984 (-)
G154791 NA non-coding downstream 169350 11284128 ~ 11284398 (-)
G154782 NA non-coding downstream 245572 11207031 ~ 11208176 (-)
G154745 NA non-coding downstream 375547 11001674 ~ 11078201 (-)
G154906 NA non-coding upstream 112048 11569273 ~ 11613611 (-)
G154909 NA non-coding upstream 156449 11613674 ~ 11614383 (-)
G154954 NA non-coding upstream 232515 11689740 ~ 11690048 (-)
G155003 NA non-coding upstream 474887 11932112 ~ 11932947 (-)
G155058 NA non-coding upstream 545915 12003140 ~ 12023672 (-)
AMCG00005875 NA other downstream 77210 11374475 ~ 11376538 (-)
AMCG00005879 dot1l,LOC106920479 other downstream 92874 11349245 ~ 11360874 (-)
AMCG00005877 sf3a2 other downstream 114613 11336595 ~ 11339135 (-)
AMCG00005876 oaz1,oaz1s other downstream 128680 11320260 ~ 11325068 (-)
AMCG00005831 shdb,LOC107719565,LOC107676987,LOC107729709,LOC103027120,LOC106584413,LOC108439278 other downstream 587952 10849515 ~ 10865796 (-)
AMCG00005989 NA other upstream 1212031 12669256 ~ 12675994 (-)
AMCG00005992 NA other upstream 1221180 12678405 ~ 12711136 (-)
AMCG00006063 ctxn1,LOC108441290,LOC106573568 other upstream 1386540 12843765 ~ 12854803 (-)
AMCG00005936 march2 other upstream 1439329 12896554 ~ 12971406 (-)
AMCG00005939 LOC100697221 other upstream 1462898 12920123 ~ 12949967 (-)

Expression


Co-expression Network