AMCG00005916


Basic Information

Item Value
gene id AMCG00005916
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 12365732 ~ 12410193 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005916
ATGAGTGTCACAGATGGCGAGGGGGCAGTTAGCCAAGACGAGAAGGCCTACTGTCTGCAGATATACCCCCGGCTGTCCTTGCAGACTGCACCATGCTGCACCCTCAGGGTCAAAAAGGAAGCCACCGCCGCCACCGTCATCCAGGACGCGGCAGGCTGCCTGTCTCTGGACGCCTCCAAGCGCTACGTGCTGGCCGAGGTGAAGGAGTGCGGCGGGGAGGAGTGGGTGCTGGAAGCCAACGACCTCCCCGTGCAGAGGGTGCTGCTGTGGCCCCGCAAAGCGCAGGACCAGCACCCCCAGAGCGACGGCTACTATTTCCTGCTGCAGGAGCGCAACCGCGACGGCTCCATCCTCTACGTCCAGCTCTCGGCCGCCTGCAAGGAGAAGGAGGCCCGGCGGCTGCTCGCCCGTGGCTTCCTCCCTCCACAGCAGGAGAACTGTGACGACCTGTGCAACCTCCCCCTGCTCAACGAGGACGCCATCCTGGACAACCTGCGCAACCGCTTCCAGAAGCACAAGATCTACACCTACGCCGGCAGCATCCTCATCGCCATCAACCCCTTCAAGTTCTTGCCCATCTACAACCCTAAGTACGTCAAGATGTACGAGAACCACCAGCTGGGCAAACTGGAGCCCCACATCTTCGCCATCGCCGACGTGGCCTATTACACCATGCTGCGCAAGCACGTCAACCAGTGTATCGTCATCTCCGGGGAGAGTGGCTCCGGCAAGACCCAGAGCACCAATTTTCTCATCCACTGCCTTACTGCCCTCAGCCAGAAGGGCTACGCCAGCGGAGTGGAGAGGACCATCCTGGGGGCTGGGCCAGTGCTCGAGgccTTTGGCAACGCGAAGACCGCTCACAACAACAACTCCAGCCGCTTCGGAAAGTTCATCCAAGTCAACTATCTGGAGAGTGGTGTCGTCAGAGGGGCTGTTGTTGAAAAGTACCTCCTGGAGAAATCTCGTTTGGTCTCTCGGGAAAAGAATGAAAGGAATTACCATGTCTTTTACTACCTGCTGGTCGGTGCCACAGAAGAGGAGCGCCAGGAGTTCAGGCTTCTACAGCCCGAAGATTATCTCTACCTCAAGCAGCAAAACTTTAAGTTGGAAGATGAAGATGATTTATGCCATGAGTTTGAGAGGCTGCAGCTGGCCATGGAGATGGTGGGCTTCCTGCCATCCACCAAGAAACAGATTTTTTCCGTGCTGTCTGCGATCCTGTACCTGGGCAACGTGACCTACCGGCGCAAGTCGACGGGCAGAGATGAGGGGCTGGATGTGGGGCCACCCGAAGTCCTCAGCACGCTGTCTGACCTGCTAAAGGTGAAAGAGGAGTTGCTGGTAGAAGCCCTGACCAAGAGGAAGACGGTGACTGTCAACGACAAACTCATCCTGCCTTACAGCCAAAGTGAGGTGAGAATCTCCCGTCTTCGGCCTCGAACGGGCCTTGTTCTTGGCAGCACGGAGATGCTGTTCTGGGCTGAGAGGCAGTTGGCTATCACAGCCCGGGACTCCATGGCGAAGTCTCTGTACAGCGCCCTGTTCGACTGGATCGTCCTGCGCATTAATCACGCACTGCTAAACAAGAGGGACATGGAGGAGTCAGTCACGgaGGAATACCAGGCAGAGGGGATCACCTGGCACAATATTGACTACACTGACAATGTGGGCTGCATCCACCTGATCAGCAAGAAACCCACTGGCCTGTTCTACTTGCTGGATGAGGAGAGCAACTTCCCTCACGCCACCGATAAGACCCTGCTGGCCAAGTTCAAGCAGCAGCACCAGACCAACCACTTCTTCGTCCTGACGCCCGTGATGGAGCCGGCCTTCGTGATCCGCCACTTTGCTGGCATTGTCAAGTACCAGATCAAGGATTTCCGGGAGAAGAACACCGACTACATGCGTCCAGACATCGTGGCCCTGCTGCGGAGTAGTGACCGGGCCTACGTGCGTGAGCTGATCGGCATGTGCCCCGTGGCCATGTTCCGCTGGGGCATCCTGAGAGCGGCCATCCGTGGCATCGCAGGCTTCTGTGAGGCGGGCAGACGCTGGGCGGCCAAGACAGCAGGTGTGGTGCGACGTGGCTCGCGGACGCCACTAGGGGAGCTGCAGCGGTCCAATACTTCGGTGGAGAAGATGTACCGCCGTGTCTCTTTGCTCGATTTCTCCTTTGATCATTCTGAGGAGCGCCCTCTAGAGGCCTTCGAAGACATCTTTACTAGCTTTGAGAATAAGAAGGACATGCATGCCCAAATCATCAGCTCCATAAAGGGCTTGCAGTGGGACGGTGAAGACCCGCGCAAGCTCCTCCAGTCCTGGGGTCGCCTGCGGTTCCCTCGTCACGTACTTCAGAAAAATAAGAGTGCCAGGCAGAAGCAGATCATTCCCAAGAACCTCATCGACTCCAAGTCCCTCAAGTTCATAGTCAGCCTGACCCTGCATGACCGGACCACCAAGTCCCTGCTGCACCTGCACAAGAAGAAGAAGCCTCCCAGCATCAGTGCTCAGTTCCAGaacTCCCTGAGCAAGCTGATGGAGACCCTGGGCCGGGCCGAGCCCTTTTTCATCAGGTGTATTCGCTCCAACGCTCAGAAGATGGAGATGCGGTACGATGAGACCCTGGTCCTGCAGCAGTTGCGGTACACGGGCATGCTGGAGACTGTCCGGATCCGGCGCTCCGGGTACAGTGCCAAGTACACCTTCCAGGAATTTATTGAGCAGTTCCGGGTGCTGCTACCCAAGAAGGCTAATCCAACTCAGGAGCATATCTCCGCCCTGTTAGAGAAGATGGGACTAGACAACACCAACTACCAGATCGGGAAAACCAAGgtCTTCATGAAGGAGCCGGAGAGGCAACTGCTGCAGGACACGCTGCACAAGGAAGTGATGCACAAGATCATCTTCCTGCAGCGCTGGTTCCGGGCCAAGCTGGAGAGGAGGCACTTCCTGCTCATGAGAGTGGCGGCTTGCACCATCCAGcaTGCCTGGCGGCTGTACCAGGTGCAGACGCAGTGCAGGGCTGCCGCCACCCTCATTCAGGCCGTGTGGCGTGGGGCTCGGCAGAGGGCTGCCTACCACAGACAGCGGGCAGGCATCCAGAAACTGCAAGCCGTGGTGAGGGGGCACTCGGCACGTCGGAGGTGCCAGTCCCTTCGTGAGGAGAAGAGGATAATGGAGGAGGAAGCCAAGAGGAGGGCAGAGGCGGAGGTCGCGAGGCGAGCGAGTGAAGCTGAGCGAGAGGCAGAGGAGAAGGCTAAAGAGGAAGAGCAGGATGAGGAGGGCGAGGAGATGACAGCGGAGGTGGATATGGCAGACAGGGAGAGCAGGGAGTCCTGGGCTGAGGATGTCGCCAAGGCAGGGGCAGCCGAGGAGGACAAGGAACAGGAAGCAGGCGACCGGTCCCAGAGGCCTCCACTCCAGCGCAGAAAGACGCCCACCAGCCAGGAGAAGCGGGAGTTGAGGCGGCAGCGAGCGATGGAGCACAGCCAGCGGGAGAGCGAGCGGGCGGCCATGGCAAGTACGAGTCCAGTTGACCGCCTGCCCCCAGAGTTGgtgaaggtcaaaggtcaggaGCTTCCAGCtcctgggggggaggggggcagtggCAAGCTGAAGGACCGTGCGGATAGCAAGGAGCTAGACCAGTACACCTTCGTGGAGTGGAAGGTGAAGGAGCCAGCGGGGAAGAAGGAGGCCAAGCCCTCGCCGAGCCGCCCCTGCTCCCTGCCCCTGGATGCCCCCAGCCCCAAGCATGAGCGGAACGGCCAACGTGAGCCGGTCAGCCCCACTGGGTCAaccaccagcaccaccacccTGCAGCGCTACAACAAGCAGGTCGAGCTGCGCGACAAGGGGGAGAAGTGGAGGGAGAAGATGAGGACCGAGGGAGGGCAGCAGGAGAGCCCCAGCCCAGAGCGCAGCATTCCCGAGGACCAGAGGCATAAGGCTTTGCAGACCAAAGGCATCTCTATCTCGCTGGAGAACGTATCCAAAATAAGCTCCCCTGGATCGGACAGCCCCATCGGACCTCCATCCAGCAAAGAGGCCAGGGTGCCCTATCGCATGGCGAGGCATCACAAGCCCAGACTAGCCTTTGTCCGCAGTCAGTTGATCTTTAAAAGTGCCGAGATGGAGGACCTCGAATACTGGACCTTCCCGCTGCCTCCTATAAGCCCCGGTATTCCTCCCCCACCTGCCACGTACACCAAGGGGCCGGCAAAAGCACAGACCCCTCCAGAGACTGCCCATGATGGAAGCAAGATGAGTACGCAGAAGAAGAGACCCAACGAGAGCTCTGGACTGCAGGACGCCGCTCAACCGCAGCTGCCCACAACAGAGTCAAAACCTGGCTTCTTGCAGAAAATTTTGAGGCGACACCCCAAGGAGGTTCCGACACCCGAAGAGCCCGAGCTGACCCTGACCCAGGCCATGAACGagtacatgaagagagagaCCACGTCCCCCACCTCACAGCCCCGCTCCCAGCACCCCGACCCGGCCACCAACAAGTTCAAACGCAACCCCACCATCAAGATCAGCCGTGCCACGCGGGTGTCGGAGCAGTGGAACGCCTCCCTGGACCGCGAGATCACCAACGCCAACGAGCTCCGCCACCTGGACGAGTTCCTTGGCAACCAGGTGAACGACCTGCGATCCCGCGGGAAGCAGCTGTCTGGGACCGAGCACATCTTCATCACAGCCACCATGCAGTTCCGAGAGTACATCAAGGGCATGTACTCCCTCGCGACGCACGTGGGCTACAAGGGGCTGATGAAGAACTACCAGATGAGGGTGGCCACCCTGGCCGGGGAGAAACAGAAGATGGAGGTCCAGCTGGTTGTCAACCTGTTCCAGTCGGTCCTCGACGGCTTCATCCGTGGAGAGATCAAGAAGGAGGAGGGCGAGCCGACCAAGCCTGCTAAAGCTATGAAGAAGAGGCgtaaaaaagacaaatctttGGAGAATATTCTGGGTCACAGGTTCAGCACTTACCAGGTCAACATAATGCAGTCATGTGACCAGTGCAGCTCCTACATCTGGGGCATGGAGAAGGCCTTGATGTGCAGCTCGTGCAAAATGGTGTGTCACAAGAAATGTCTCCCTAAAATCCACACCGACTGTACCTCCTATTCTATGAAAAAGAATGAGGAGGAAGGGTCCCAGCACTTTGGTGTGCGTGTGGGCACCCTGACCTGCGACAAGAACCCCGTGCCCAAGGTCCTGTGCATCCTGCTGGAGCACGTGGAGATGAACGGCCTCTACACCGAGGGCATCTACCGCAAGTCTGGCTCAGCCAACCGCATGAAGGAGCTGCATCAGCTACTGGACACAGAGCCCAGCTCGGTGAATTTGGAGGAGTACCCCATCCATGCCATCACGGGCATTGTGAAGCAGTGGCTGAGGGAGCTTCCAGAGCCCCTCATGACCTTCACCCACTACAGTGACTTCCTTCACTCTGTGGAGCTGCCAGAGAAACAGGAGCAGCTTTTTGCCATCTACCGAGTCTTGGACCTGCTCCCTACTGCCAACTTCCACACCCTAGAGAGGCTCATTTTCCACCTCGTCAGggTGGCCAAAAACGAGGCTCACAACCGCATGTCCCCTAACGCTCTGGCCATCGTCTTCGCTCCCTGCATCCTGCGCTGTCACGACACAGCCGACCCCCTCCTCAGCATGAAGGATGTGGCCAAGACCACCACGTGTGTGGAGATGATAATAAATGAGCAGATCAGGAGGTACAATGAGAAGATTGAAGAGATCGAGCAGCTGGAGTATGCCGAGGCTATGGCCGTCAACCAGCTCAAGCTGAAGAGACAGAACACGGTGCACGAGAAACAGTCTTCGAACCTGAGCGACGTCCCCGAGGACGAGCCCGTTAATCTGGACTCGGACGCAGAGCAGACCCTCATGATGCGCATTCAGTCCATCAAGCAGGAAAAGGAGGAAATCGCATGTCGGCTTCCGGATCTGGAGCAGCCGGGCTCGGACCAGGAGAACCTGGACTCAGAGGCGTCCGTGAGCTCAGAGAGTCTGCTGGATGACCGGCCGGGGAACTCGGACACCGAAGGGACGCCAAAGGTAGTAAAGAAATCGCCCTGCCTGCCCAAGCCTGCCGATCTGTCTCTGCGGTGTGCCAGGCGGTCCCCGCCTCAGACTCAGCCTCAGCCTCGGCCTCAGCCACCACCACAGTCGTCGTGTGACTCCGACCTCGCCCAGGCCACCCCCTCCCGCTGCCTGCCCCCCACCACTCTGCACACGGTCAGGCTTCAGCGCCGGCAGCCCGTCATCCCCACCGCCAACATCAAGCTGCCCCCCGGCGTCCTCATCCGCACCGTCTCCCAGACGCTGCCCCAACGCAACGCCATGACCCTGCAGCTGGTGAAGCGGCGAGAGCAGCCGGCGCGGCGCAAAGACAGCATCCAGTCTCTGTACATCCTCCCCGGGTCTGAACCCTTCCCCTCCCCCGCCTCCGCTGCCAACGACTACGAACCCACCCCCAAAGTCACAAGGCGATTTTCGGACCCCGACATCCCGTACATCGACGACGAGGCGTACGAGAACTAGGCCTGAGAGAGAGCATGCACACGTTCTTGCAGGATGGGAGACTCGCTGTGGATTTTGTTACAACTATCCAGAGGatagatttttaataataataataataataataataaaacaggattTCTCACCAAGCACTTTTCTATacaattcgattttttttttttttttttaatataaaactaaacagTGCTGCATTTTTATGTCAGCaaacaaaacctaaaagaaaAATTATACGTTAACTGTGGACCAATCTTTCTTCAGATGTTTCTTTGAAAGGGACCAGCAGATGTCAACAGATTGAAGCACCTTTTCTTGCCTTCCTCACCCCCCTAATTTTATTAGCACTGTGGAAGGGGAACAATGGAGTCAAGACTGTgccttactttttttttttttctttctatcctgtattataaaatgcttcaattgttgttgtttttttttctatggtcttctgtattttaaatgaagagGGGGGTGATCTTTTATCACAAGGGGTTTATAGTTCTTTTCTTATCTTGTGTCTTTCATGTACAGAAAAGCTCCTGTGGACCAAATGCCATTAATGTGTCAATGGTGCCTTATGTGCAATGGACTGGACCATCTTCGCAACCTTCCCACCCCTGTATAATGCATGTACAGAGTTTAGAAATGTTACAGAAAAGAGGGAGGGGACAGGACAATTTGATTAATCAAAGGGAAATGTACATTGTCTCATTCAGAAACCCACAAGACAAATGTGACACTATCCATGTTCTCGATCAGAACCAGCCAAGTCAATTCAACTGTGCGGTAAGAAAGCATGTTGCACTAAGTGACGTTTTTTTTCTGATGGTGCTTTGAGCTTCTATTGTACAATGTATGCTGTTCTGAGGTAGTGACACAGAAATTTAAGTAAACATTATAAAGAAATTCTTCTTTTAGAAACCAAGAAGAATTTTGTATCAATTTCTTAAACTAAACCGAGGACATTTATCTTTGCTGTGTTCATTTGCATTTAGagctcctccccctctcctatCTTGGGAGGCTGTGTGCTTTGTAACCTTGTATGCTCTCACCTCATTGGATGATCTGGTGTGAAGTCATGAAAGACGGgaagatttgtattatttcacacCTGTGGAAAGGCAGTACATGACAGAATAGAGTGTGAATGCTGTAAAATGACTAAACTGGGAGAACAGTTCATGTTATGAGAGGTTTATCCTTAggtagggccctgtgttttgcatgaGTAGCCATTTCAATTATATGGACCGATCGCACACAATGCAGGGCCTTGCATATAAGGACTAAATGGGGTGATTTTAAATGCTAGAAATGTATCAATTATTAAGTAATTCAGTGCTTTCAATGCTAAATGTTGTCCATATTCagcacagtttttttctttttatttatctttgtttttggggggtttgtttttttggtaggGTTTAGTGGTGATCACATTGCATTGTGACCAGATTGTCATCTGTTCTTACTCTAAAACAGTGttgcaaataattaatttaaatggtcTCGTCTGAAGTCCCCGCTATCAAgctatatgcatgtatttttttgtggttgaACTAGATTGCAGCAGACGATAAACTAAACTAACCATCGATCTTCCCCTAAAGCAGGACCCCAATTAAAATTAGTAGAACAATTGTCATTCCAGTGCGCCGCAGATGGGGCCCTAATAAGAGTGACCACATTAGTATATTTAGGTCAAAAAGAGATTGACCCAAATCAAATCCccacaaccaaaaacaaatgtccatAAATCAACCCTCAACGTGGAGTAGTTCATTACGGTCTACTTGAGTCCATCTGGAATACACCCCGTTTTAAAGCACGGCTGCCTCGTGTCTAGGAGATTCCcattgaaaaggaaatggaTCCCTGCAGCCTCACACTTCTCCCAAAGCCACACCTGGCTCTGTCCGCCGCCATCCCTTACACCGTTGAGAGGTTCACACTTCAGTACGAGTCCCCTGGAAAGATGCGTCCTAAAAGAACAATCCTTTTGTTGCAGGTGCTTTCTAAATGAATGTCTGTAGAATTGGAGGACACCCGGAACATCTGTACAGCGACACACGGAGCCCTTCGCACACATCTCCAGACAAACACGCCCAGTTATGAAGGACCCACATCGGAGATTACTAAAGAGTTTAGCAGTCTAGCCCAAACTACCCAGCCGCACTGCTGAAACTCACTGCTTTGCCACCCTCTGAGAAATCTGAGGGAGATCCAGATGAATCGGGATGGCTGGATTGCCTCCATCATTATGGCCTTAATATCATTTGAAGGAAAAATAGAATGGTTTCGCAGGAAAACGGGTTCACttcaaagggatttattttacaattgtagtgaattgcaaaaaaaaaaaaaaaaaaaaaaaagtgttcatttttgtttt

Function

GO: NA

KEGG:

id description
K10360 MYO9; myosin IX

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005916 True 8980 mRNA 0.54 40 12365732 12410193

Neighbor

gene id symbol gene type direction distance location
AMCG00005917 hiat1a,mfsd14a,LOC108413745,LOC107738165,LOC107659405,LOC102785602 coding downstream 2856 12349245 ~ 12362876 (-)
AMCG00005918 NA coding downstream 25234 12335317 ~ 12340498 (-)
AMCG00005919 NA coding downstream 39469 12325100 ~ 12326263 (-)
AMCG00005961 ncln,LOC106573831 coding downstream 84936 12267085 ~ 12280796 (-)
AMCG00005959 tnfaip8l1,LOC107702643,LOC107727554,LOC107733325 coding downstream 119498 12239333 ~ 12246234 (-)
AMCG00005923 LOC103464111,LOC103138520,LOC102237431,LOC107100952,LOC103373679,LOC105900972,LOC100702697 coding upstream 218523 12628716 ~ 12642191 (-)
AMCG00005988 NA coding upstream 252159 12662352 ~ 12665106 (-)
AMCG00005991 NA coding upstream 307385 12717578 ~ 12722749 (-)
AMCG00005990 sppl2b,sppl2 coding upstream 316654 12726847 ~ 12735907 (-)
AMCG00006064 NA coding upstream 336736 12746929 ~ 12759443 (-)
G155073 NA non-coding downstream 239604 12125161 ~ 12126128 (-)
G155058 NA non-coding downstream 342060 12003140 ~ 12023672 (-)
G155059 NA non-coding downstream 348366 12007468 ~ 12017366 (-)
G155003 NA non-coding downstream 432785 11932112 ~ 11932947 (-)
G154954 NA non-coding downstream 675684 11689740 ~ 11690048 (-)
G155183 NA non-coding upstream 37327 12447520 ~ 12447719 (-)
G155235 NA non-coding upstream 195530 12605723 ~ 12611445 (-)
G155284 NA non-coding upstream 336230 12746423 ~ 12746716 (-)
G155326 NA non-coding upstream 480914 12891107 ~ 12891358 (-)
G155331 NA non-coding upstream 498501 12908694 ~ 12910923 (-)
AMCG00005875 NA other downstream 989194 11374475 ~ 11376538 (-)
AMCG00005879 dot1l,LOC106920479 other downstream 1004858 11349245 ~ 11360874 (-)
AMCG00005877 sf3a2 other downstream 1026597 11336595 ~ 11339135 (-)
AMCG00005876 oaz1,oaz1s other downstream 1040664 11320260 ~ 11325068 (-)
AMCG00005831 shdb,LOC107719565,LOC107676987,LOC107729709,LOC103027120,LOC106584413,LOC108439278 other downstream 1499936 10849515 ~ 10865796 (-)
AMCG00005989 NA other upstream 259063 12669256 ~ 12675994 (-)
AMCG00005992 NA other upstream 268212 12678405 ~ 12711136 (-)
AMCG00006063 ctxn1,LOC108441290,LOC106573568 other upstream 433572 12843765 ~ 12854803 (-)
AMCG00005936 march2 other upstream 486361 12896554 ~ 12971406 (-)
AMCG00005939 LOC100697221 other upstream 509930 12920123 ~ 12949967 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000030_10797691_10834282 MYO9B coding CI01000030 null 10797458 ~ 10836927 (-)