AMCG00005918


Basic Information

Item Value
gene id AMCG00005918
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 12335317 ~ 12340498 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005918
ACAATTATAACGCCTCAGAGACCCACAGTGCAGGTTGGCCAGGTGGTCACTATGACGTGCACTGCGACCTGTCCACAAGGAAGACCTGAGTGGAGGAGAGGGTTTGATGCCAGCCCCTTCCAGGTGGCCAGCAATGACCATGAGAGCAAGCTGACCATCCCTGCAGCAGAACCGGAGGATGCAGGAACATATACATGTATGACAAGATGTGGAGAGATCATAGATAGCAGGACAActgaagtatttgtttttgCTTTTCCAGATCCTGTTGTGTACACCGTCCCAACCAACCCCGTCTCAGGCCAAGTCTTCGAGGTGTTTTGCGTTTTGGACGGTGTCTATCCTCCTGAGGTCGAGATGCACTTGATTCGTGGTGAAGACGCCCTCGAAGGGTTGGAACCAGACGACACGGAAGGGGACTTCATTCTCTATAAGTTCGTGTTAAAAGCTGACGGACAGATCGGGACGGGTAACACCCAATACAGGTGTGAAGCCATTCTGACGCTCAATCACCATCTCCACCTCAGAAATACAACACTGCCGATCCAGTTTAAAGCGCCCCCTCAGAACACGTCTGTGTCTCCTGCCTTCATACGAGGACAGGCTGGGCACTCGGCTTCCTTTTCCTGCAGGGCCCCAACCGAGTCTTCTCTGAACATCTCCTGGGTGAAGGAGGGCAGCGAGGGGATATGGAAACCCCCCAGGCACTGGCTGCAGACCCCAAGCCCGGGGAGACTGCAGGTGGATATTGAGCAGCTGCAGGTGGAGGACAGAGGGAATTACACCTGTATCATCAGCAACGACATAGGAGAGACCCGGCACACCCTGACCCTGCTCCTGTCCTACGGCCCCCGGAGCGTGGAGAGCAGCCCCCGGGAGATGACGGCGAGGGAAGGGGAGCCGCTGACGCTGAGCTGCAGTGGGGATGCCAGCCCCCCGCCTGCCATCACGTGGACCAAGGACGATGACTCGCCACCCCCCTCCTGGAAGGTGGGGGCCACCCAGGGCCGCGCCACCCTGAGCACTGCCGCCCTTGCCCCCCGGGATGCCGGCATCTATCTGTGCACCATCCAGAACAGCATAGGCAGTGAGACGCGGGTGGTGTCCCTCACTGTGCAGTgtGATCCAACAACCTCCAGTGCTCCCGATGCAACCTCTCCCCCTGTCTCTGACCCAGAGCGCAGCACAGCGAGTGCAGGCGATGTACAGACGACCAGAGAAGGCGTCACAACTGCTGTGAGTGAAAGTGCCATCGACAGCACAGAGAGGGAGCCAGTGGAAGACGTGCCCCCCATAACCACCACATATGTGTTGTGCACAATGGGCCCAGTGGCCGGCCTGTCATCGCTGGGTTTAGTGATCCATCTGATCCGCCGCATGAAGAAGAAATCCCTCCTGGAGCTCCCCCAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005918 True 1413 mRNA 0.58 7 12335317 12340498

Neighbor

gene id symbol gene type direction distance location
AMCG00005919 NA coding downstream 9054 12325100 ~ 12326263 (-)
AMCG00005961 ncln,LOC106573831 coding downstream 54521 12267085 ~ 12280796 (-)
AMCG00005959 tnfaip8l1,LOC107702643,LOC107727554,LOC107733325 coding downstream 89083 12239333 ~ 12246234 (-)
AMCG00005960 NA coding downstream 122946 12194580 ~ 12212371 (-)
AMCG00005893 polrmt,LOC102781777,LOC103149847,LOC101483880,LOC106937851 coding downstream 215364 12087043 ~ 12119953 (-)
AMCG00005917 hiat1a,mfsd14a,LOC108413745,LOC107738165,LOC107659405,LOC102785602 coding upstream 8747 12349245 ~ 12362876 (-)
AMCG00005916 NA coding upstream 25234 12365732 ~ 12410193 (-)
AMCG00005923 LOC103464111,LOC103138520,LOC102237431,LOC107100952,LOC103373679,LOC105900972,LOC100702697 coding upstream 288218 12628716 ~ 12642191 (-)
AMCG00005988 NA coding upstream 321854 12662352 ~ 12665106 (-)
AMCG00005991 NA coding upstream 377080 12717578 ~ 12722749 (-)
G155073 NA non-coding downstream 209189 12125161 ~ 12126128 (-)
G155058 NA non-coding downstream 311645 12003140 ~ 12023672 (-)
G155059 NA non-coding downstream 317951 12007468 ~ 12017366 (-)
G155003 NA non-coding downstream 402370 11932112 ~ 11932947 (-)
G154954 NA non-coding downstream 645269 11689740 ~ 11690048 (-)
G155183 NA non-coding upstream 107022 12447520 ~ 12447719 (-)
G155235 NA non-coding upstream 265225 12605723 ~ 12611445 (-)
G155284 NA non-coding upstream 405925 12746423 ~ 12746716 (-)
G155326 NA non-coding upstream 550609 12891107 ~ 12891358 (-)
G155331 NA non-coding upstream 568196 12908694 ~ 12910923 (-)
AMCG00005875 NA other downstream 958779 11374475 ~ 11376538 (-)
AMCG00005879 dot1l,LOC106920479 other downstream 974443 11349245 ~ 11360874 (-)
AMCG00005877 sf3a2 other downstream 996182 11336595 ~ 11339135 (-)
AMCG00005876 oaz1,oaz1s other downstream 1010249 11320260 ~ 11325068 (-)
AMCG00005831 shdb,LOC107719565,LOC107676987,LOC107729709,LOC103027120,LOC106584413,LOC108439278 other downstream 1469521 10849515 ~ 10865796 (-)
AMCG00005989 NA other upstream 328758 12669256 ~ 12675994 (-)
AMCG00005992 NA other upstream 337907 12678405 ~ 12711136 (-)
AMCG00006063 ctxn1,LOC108441290,LOC106573568 other upstream 503267 12843765 ~ 12854803 (-)
AMCG00005936 march2 other upstream 556056 12896554 ~ 12971406 (-)
AMCG00005939 LOC100697221 other upstream 579625 12920123 ~ 12949967 (-)

Expression


Co-expression Network