AMCG00005953


Basic Information

Item Value
gene id AMCG00005953
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 13462216 ~ 13462560 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005953
ATGTCCAACACGGAGAGGAAGCCGGCCCTGAGCCCCAGCCAAAGGCAGGCGCACTATGCCAACAGGCGAGAGCAGGCTGCGTGCGCCCAGTGCGTCAAGACCATCGAGGCGGCCAAGCACTCTGCCATGGTGCGCCACGACCGGGACTTCTGCGCCTACCTGTCCAAACTGTCCCGGTACACCACCAAAAACGCCAACAACCccggagagggacagagaggggaaGGGGCTGAAGGTGCGGCGCCGGGGGCACAAGGGAAAGATGCTAAAGCCGGCGCCGGTGACCAGATGGGGGCTATTCCCGACTACGTCCTGTCCAGGCGGAGATGGTCGTCAATATTTTGA

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04111 Cell cycle - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005953 True 345 mRNA 0.63 1 13462216 13462560

Neighbor

gene id symbol gene type direction distance location
AMCG00005952 NA coding downstream 65532 13393658 ~ 13396684 (-)
AMCG00005924 slc25a42,LOC108239543 coding downstream 74822 13385183 ~ 13387394 (-)
AMCG00005945 tmem161a coding downstream 177488 13279303 ~ 13284728 (-)
AMCG00005944 NA coding downstream 211528 13247754 ~ 13250688 (-)
AMCG00005943 NA coding downstream 217429 13240482 ~ 13244787 (-)
AMCG00005976 NA coding upstream 68316 13530876 ~ 13533884 (-)
AMCG00005978 LOC106573600,LOC105011525,LOC106613740 coding upstream 98512 13561072 ~ 13567481 (-)
AMCG00005970 atp5d,LOC107554819,LOC106613744,LOC107719603 coding upstream 252424 13714984 ~ 13718428 (-)
AMCG00005969 NA coding upstream 289428 13751988 ~ 13761430 (-)
AMCG00005972 stk11 coding upstream 309922 13772482 ~ 13785885 (-)
G155431 NA non-coding downstream 187523 13273640 ~ 13274693 (-)
G155429 NA non-coding downstream 195054 13266963 ~ 13267162 (-)
G155426 NA non-coding downstream 209727 13252122 ~ 13252489 (-)
G155400 NA non-coding downstream 354149 13107812 ~ 13108067 (-)
G155391 NA non-coding downstream 354723 13079485 ~ 13107493 (-)
G155502 NA non-coding upstream 1895 13464455 ~ 13465588 (-)
G155503 NA non-coding upstream 4410 13466970 ~ 13484019 (-)
G155521 NA non-coding upstream 212649 13675209 ~ 13677337 (-)
G155550 NA non-coding upstream 323446 13786006 ~ 13787634 (-)
G155591 NA non-coding upstream 414163 13876723 ~ 13881170 (-)
AMCG00005946 ncan,ncanb,LOC107687726,LOC107554802,LOC107599474,LOC107719650,LOC106613725 other downstream 305898 13123557 ~ 13156318 (-)
AMCG00005966 sbno2,LOC106573581 other downstream 410497 13036424 ~ 13051719 (-)
AMCG00005936 march2 other downstream 490810 12896554 ~ 12971406 (-)
AMCG00005939 LOC100697221 other downstream 512249 12920123 ~ 12949967 (-)
AMCG00006063 ctxn1,LOC108441290,LOC106573568 other downstream 607413 12843765 ~ 12854803 (-)
AMCG00005977 LOC106573600,LOC106613740,LOC105011525 other upstream 105907 13568467 ~ 13583351 (-)
AMCG00005971 midn,LOC106573601,LOC105011665,LOC106613743 other upstream 201504 13664064 ~ 13698534 (-)
AMCG00005997 rad23ab,LOC107704496,LOC107717165 other upstream 696571 14159131 ~ 14171607 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other upstream 874331 14336891 ~ 14341603 (-)
G155770 LOC103376870 other upstream 1046673 14509233 ~ 14509614 (-)

Expression


Co-expression Network