AMCG00005969


Basic Information

Item Value
gene id AMCG00005969
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 13751988 ~ 13761430 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005969
ATGACAGTCGTGCCCTACCTGGAGGACCTGCACGGCTAcactgaggaagaggaggacgagCTCTTTGACGGGGAGGACGACATCATCTACACTCAGGACTTCACAGTGCCAGGGCAGGTGCCCGAGGAGGAAGTGGAGCAGAATGGGCAGGAGCACGGCCGGGGGCTACCCAAGCCCGTGTGTGTGAACGGCACGGAGGCGAGCCAGTTCAACAGCAAGTCAAAGACCGAGCGGCGGTCCAGCTCATCCTCCAACCCCTCCCGGAAGGGCATGTCCACCAGCAGCAAGATCCGCAAACTGTCCACCTGCAAGCAGCAGTGA

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0097009 energy homeostasis biological_process
GO:0060575 intestinal epithelial cell differentiation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005969 True 321 mRNA 0.61 2 13751988 13761430

Neighbor

gene id symbol gene type direction distance location
AMCG00005970 atp5d,LOC107554819,LOC106613744,LOC107719603 coding downstream 33560 13714984 ~ 13718428 (-)
AMCG00005978 LOC106573600,LOC105011525,LOC106613740 coding downstream 184507 13561072 ~ 13567481 (-)
AMCG00005976 NA coding downstream 218104 13530876 ~ 13533884 (-)
AMCG00005953 NA coding downstream 289428 13462216 ~ 13462560 (-)
AMCG00005952 NA coding downstream 355304 13393658 ~ 13396684 (-)
AMCG00005972 stk11 coding upstream 11052 13772482 ~ 13785885 (-)
AMCG00006003 sugp1,LOC107729615,LOC107563402 coding upstream 31932 13793362 ~ 13800830 (-)
AMCG00006005 nmrk2,LOC106511986,LOC103138501,LOC101469484,LOC103464095,LOC102302661 coding upstream 52762 13814192 ~ 13827586 (-)
AMCG00006004 NA coding upstream 69487 13830917 ~ 13841962 (-)
AMCG00005983 NA coding upstream 155905 13917335 ~ 13924862 (-)
G155521 NA non-coding downstream 74651 13675209 ~ 13677337 (-)
G155503 NA non-coding downstream 267969 13466970 ~ 13484019 (-)
G155502 NA non-coding downstream 286400 13464455 ~ 13465588 (-)
G155431 NA non-coding downstream 477295 13273640 ~ 13274693 (-)
G155429 NA non-coding downstream 484826 13266963 ~ 13267162 (-)
G155550 NA non-coding upstream 24576 13786006 ~ 13787634 (-)
G155591 NA non-coding upstream 115293 13876723 ~ 13881170 (-)
G155593 NA non-coding upstream 122161 13883591 ~ 13884628 (-)
G155652 NA non-coding upstream 327906 14089336 ~ 14092457 (-)
G155655 NA non-coding upstream 404749 14166179 ~ 14166404 (-)
AMCG00005971 midn,LOC106573601,LOC105011665,LOC106613743 other downstream 53454 13664064 ~ 13698534 (-)
AMCG00005977 LOC106573600,LOC106613740,LOC105011525 other downstream 168637 13568467 ~ 13583351 (-)
AMCG00005946 ncan,ncanb,LOC107687726,LOC107554802,LOC107599474,LOC107719650,LOC106613725 other downstream 595670 13123557 ~ 13156318 (-)
AMCG00005966 sbno2,LOC106573581 other downstream 700269 13036424 ~ 13051719 (-)
AMCG00005939 LOC100697221 other downstream 802021 12920123 ~ 12949967 (-)
AMCG00005997 rad23ab,LOC107704496,LOC107717165 other upstream 397701 14159131 ~ 14171607 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other upstream 575461 14336891 ~ 14341603 (-)
G155770 LOC103376870 other upstream 747803 14509233 ~ 14509614 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other upstream 918367 14679797 ~ 14682980 (-)
AMCG00006043 NA other upstream 1021076 14782506 ~ 14784280 (-)

Expression


Co-expression Network