AMCG00005976


Basic Information

Item Value
gene id AMCG00005976
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 13530876 ~ 13533884 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005976
ATGGCTTCTGGGAAGGCAGAGGACGGGGATAAGGCTAGTGCTGATTCGTGGAGGCTAATAGGCCCGGCCACCGAGCTTTCCAAGAAACAGTGCCGGTTGATGTACTCCTCTCTGGGCTGCGCTTCGGACCTGTGTCTCTTCCACATCAGAGGCGAGTTCTACGCTATGGAGGCCCGCTGCGCCCATTCGGGTGGCCCGCTGTGTGAGGGTGATATAGAGGAGGCGGATGGTGTTCTGCAGCAACAAGTGTATGAAGTGAAGGTGCAGGATGGGTCAGTGTATGTAAAGCACACAGCCCAGCTATCTTTAACACCATTTCCTTTGACCTCGAGGCAGTGA

Function

GO:

id name namespace
GO:0051536 iron-sulfur cluster binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005976 True 339 mRNA 0.55 3 13530876 13533884

Neighbor

gene id symbol gene type direction distance location
AMCG00005953 NA coding downstream 68316 13462216 ~ 13462560 (-)
AMCG00005952 NA coding downstream 134192 13393658 ~ 13396684 (-)
AMCG00005924 slc25a42,LOC108239543 coding downstream 143482 13385183 ~ 13387394 (-)
AMCG00005945 tmem161a coding downstream 246148 13279303 ~ 13284728 (-)
AMCG00005944 NA coding downstream 280188 13247754 ~ 13250688 (-)
AMCG00005978 LOC106573600,LOC105011525,LOC106613740 coding upstream 27188 13561072 ~ 13567481 (-)
AMCG00005970 atp5d,LOC107554819,LOC106613744,LOC107719603 coding upstream 181100 13714984 ~ 13718428 (-)
AMCG00005969 NA coding upstream 218104 13751988 ~ 13761430 (-)
AMCG00005972 stk11 coding upstream 238598 13772482 ~ 13785885 (-)
AMCG00006003 sugp1,LOC107729615,LOC107563402 coding upstream 259478 13793362 ~ 13800830 (-)
G155503 NA non-coding downstream 46857 13466970 ~ 13484019 (-)
G155502 NA non-coding downstream 65288 13464455 ~ 13465588 (-)
G155431 NA non-coding downstream 256183 13273640 ~ 13274693 (-)
G155429 NA non-coding downstream 263714 13266963 ~ 13267162 (-)
G155426 NA non-coding downstream 278387 13252122 ~ 13252489 (-)
G155521 NA non-coding upstream 141325 13675209 ~ 13677337 (-)
G155550 NA non-coding upstream 252122 13786006 ~ 13787634 (-)
G155591 NA non-coding upstream 342839 13876723 ~ 13881170 (-)
G155593 NA non-coding upstream 349707 13883591 ~ 13884628 (-)
G155652 NA non-coding upstream 555452 14089336 ~ 14092457 (-)
AMCG00005946 ncan,ncanb,LOC107687726,LOC107554802,LOC107599474,LOC107719650,LOC106613725 other downstream 374558 13123557 ~ 13156318 (-)
AMCG00005966 sbno2,LOC106573581 other downstream 479157 13036424 ~ 13051719 (-)
AMCG00005936 march2 other downstream 559470 12896554 ~ 12971406 (-)
AMCG00005939 LOC100697221 other downstream 580909 12920123 ~ 12949967 (-)
AMCG00006063 ctxn1,LOC108441290,LOC106573568 other downstream 676073 12843765 ~ 12854803 (-)
AMCG00005977 LOC106573600,LOC106613740,LOC105011525 other upstream 34583 13568467 ~ 13583351 (-)
AMCG00005971 midn,LOC106573601,LOC105011665,LOC106613743 other upstream 130180 13664064 ~ 13698534 (-)
AMCG00005997 rad23ab,LOC107704496,LOC107717165 other upstream 625247 14159131 ~ 14171607 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other upstream 803007 14336891 ~ 14341603 (-)
G155770 LOC103376870 other upstream 975349 14509233 ~ 14509614 (-)

Expression


Co-expression Network