AMCG00006020


Basic Information

Item Value
gene id AMCG00006020
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14546180 ~ 14546493 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006020
ATGGTATCCAGCCTTAACAAACAGGAAATCAACAGAAGAGACACGTTTGTGCTGAATGGGTTCTTGGAGTGCCAGGAGTGGCAGACGCCCAACACTGCCACCTTCCTTTCAGAACCTCTCTGTGCAGGACATCAGTCTTCCCACTTCAGTTACTGCCGGGACACACAGTGGGACGGTACTCTTTACACAGTGTCAAAGGCGGAGTTCTTAAACTACTATGCCGGAGTCAGTGCTTCCATCAACAGTGATGCCTATTTTATGTTGTGTATGAAGTACAGCTGGGGACTATga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006020 True 291 mRNA 0.48 2 14546180 14546493

Neighbor

gene id symbol gene type direction distance location
AMCG00006018 slc1a6,LOC108437295,LOC105011479,LOC108230844,LOC107747749,LOC106613701,LOC107757933 coding downstream 38792 14492005 ~ 14507388 (-)
AMCG00006026 NA coding downstream 87839 14453018 ~ 14458341 (-)
AMCG00006027 NA coding downstream 100687 14441910 ~ 14445493 (-)
AMCG00006029 NA coding downstream 145007 14393454 ~ 14401173 (-)
AMCG00006028 NA coding downstream 155072 14383670 ~ 14391108 (-)
AMCG00006019 NA coding upstream 451 14546944 ~ 14549687 (-)
AMCG00006035 NA coding upstream 42878 14589371 ~ 14593370 (-)
AMCG00006039 nduab,ndufa11,LOC106613708 coding upstream 101096 14647589 ~ 14651753 (-)
AMCG00006036 NA coding upstream 114092 14660585 ~ 14662509 (-)
AMCG00006038 NA coding upstream 117065 14663558 ~ 14670355 (-)
G155768 NA non-coding downstream 54251 14489290 ~ 14491929 (-)
G155754 NA non-coding downstream 121434 14422504 ~ 14424746 (-)
G155717 NA non-coding downstream 175998 14369761 ~ 14370182 (-)
G155703 tpm4,LOC107653617,LOC107757474 non-coding downstream 223066 14318979 ~ 14323114 (-)
G155701 NA non-coding downstream 240483 14300475 ~ 14305697 (-)
G155783 NA non-coding upstream 23069 14569562 ~ 14569836 (-)
G155899 NA non-coding upstream 433891 14980384 ~ 14981621 (-)
G155957 NA non-coding upstream 553816 15100309 ~ 15105533 (-)
G155989 LOC105900582,LOC107680261,LOC107709904,LOC107550622,LOC107688471,LOC107585101 non-coding upstream 632558 15179051 ~ 15217634 (-)
G156002 NA non-coding upstream 658376 15204869 ~ 15212286 (-)
G155770 LOC103376870 other downstream 36566 14509233 ~ 14509614 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other downstream 204577 14336891 ~ 14341603 (-)
AMCG00005997 rad23ab,LOC107704496,LOC107717165 other downstream 374573 14159131 ~ 14171607 (-)
AMCG00005971 midn,LOC106573601,LOC105011665,LOC106613743 other downstream 847646 13664064 ~ 13698534 (-)
AMCG00005977 LOC106573600,LOC106613740,LOC105011525 other downstream 962829 13568467 ~ 13583351 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other upstream 133304 14679797 ~ 14682980 (-)
AMCG00006043 NA other upstream 236013 14782506 ~ 14784280 (-)
AMCG00006102 slc5a5 other upstream 452007 14998500 ~ 15007979 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other upstream 886939 15433432 ~ 15491642 (-)
G156206 klhl26,LOC107680559,LOC107597147 other upstream 1407583 15954076 ~ 15957090 (-)

Expression


Co-expression Network