AMCG00006026


Basic Information

Item Value
gene id AMCG00006026
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14453018 ~ 14458341 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006026
CATGATGGAAGACCATTCTTCATTGGCTGTAGATCACCTGAACAGGAGACGTTCAGCTGCTGGTGGGACCCTGGCCTCTATGGTAATGTGTCTGGAACTCCAGCCTTTAAAGTGCTCTATTCCCAATCAGGGTGTCAGGAGCTCAAAGAATGCCCGGACTATGTCACATCTGGGGAGAACAGCTGCTACTTTAACCAATTGTACACATCTGTCTGGACGGGCTACTGCCTTCTGATTGAGGTCAAAACCGAGTGGGGATCTGTCACCTCAGAGCCATACTCCATCGACATCCTCAATATCCtgcagccGGATCCTCCGGTTCTCTTAAACTGGGCCCGTCTCAATGCCACTGACTCCACCCACTATGCGGATGTCATAATAAAATGGGCTCCGCCCCCCTCTGCTGATGTGAGCTCTGGTTGGATATCCCTGCAGTACCAGCTCCGTTTCAGATCGACGTCAAACCAGAAGTGGAAAATGGGCCCTGTGATTTTGCAACGTTCCTCTGCACTGTACGCCCTGGAAATAGGACAGGAGTACGAGGTACAGGTACGCTGCAAACCCCAATCTGAGGGCAACTTCAGCACCTTCAGTGACTCGCTGTGCTTCTCTCTCAGCCCTCAGAGGAGACCACTGTCCGTACTTCCAGGGTTTATTTCCTTGgcctccacagtgctgcctccTCTGGCTGTTTTcttgtctctgtttgtgttgtaCGTGCTATGCAGTGGGACTCGAATTAAACACGTGCTCCTGCCCCCAATCCCTGTGCCGAAAATTACTGGGATTAACATGGAACTGTTGTGGGGTGGCCAGCCCAGTGACTTGGGCATCACCTACAACAGCATAAAATGCTCTCCAGAGATGAGCGAGGAGAACTGGGAGGAGTTCCCAGAGACAGACTTCCAAGATGACACAACTTCCCATATGCTGGAGAGCGGGAAGGGGCCTCAAGCCGGCAACTGCGCAGACGGGAGCGACTCCGGCTGCGAGAGCATGGACAGCAGTGACATAGACTATTCACGAGACAGCCTCCCTGTCAGCTACAACTCCCTGGAGACCATTTCCAGCGAGATGGCGCCCTCCCCTGGCCTTGATGAAGATGGCAATATAAGGAGCTTTGCAAAACCCCAACGTGACCCCTTAAAACTCCTGGCTGCCTTTTGTACCTTTGCAGAAGGCCAGGAAGACGACCGCATGCCACAGTACAGAAAAGCCCAGGTGGGTCAAGTCCTCTTCAAGTATAATGATAGTGGGGGCTTTTATAGCCACGTGAAACCTTTGGCGTCAGAAAGCGGTGTCATCGCTCAGGCTGATGGTGGAATCGTGCCGCCCACTGCCACCACAGTCAATCAGGGTCATTGGCAAATGCTCAGCAAGCATCTGAGAGGCACCGCTCCTGAAAGTGCATCATCACCTGAGCACACAGACGCCAACTACTATGTTATTCTGTAGCCCCAAATTAACAACTGCTTTGACTGTGGGTTTGGTACATTGCTTTTTCTCCTGCCACTCACAGAAAAATGGGTTTGCAATGCTTTGGTTGTTGCCAAGTTGTGTGGATGTGCACTGAATAAAAGCCTCTAGTCATAGATGTGAAATAAGCTTAAAAGAGTAAAGACTGATTCTTAAATGTAGGCCATGTTTCAATCTAGACAATTATTTtctgacattatggacattttctgtgttgaccAGTGGCataaactcctgattaaatccattctgatttcatgttgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006026 True 1740 mRNA 0.50 7 14453018 14458341

Neighbor

gene id symbol gene type direction distance location
AMCG00006027 NA coding downstream 7525 14441910 ~ 14445493 (-)
AMCG00006029 NA coding downstream 51845 14393454 ~ 14401173 (-)
AMCG00006028 NA coding downstream 61910 14383670 ~ 14391108 (-)
AMCG00006015 cib3,LOC107687907 coding downstream 78075 14370409 ~ 14374943 (-)
AMCG00006014 NA coding downstream 181009 14264388 ~ 14272009 (-)
AMCG00006018 slc1a6,LOC108437295,LOC105011479,LOC108230844,LOC107747749,LOC106613701,LOC107757933 coding upstream 33664 14492005 ~ 14507388 (-)
AMCG00006020 NA coding upstream 87839 14546180 ~ 14546493 (-)
AMCG00006019 NA coding upstream 88603 14546944 ~ 14549687 (-)
AMCG00006035 NA coding upstream 131030 14589371 ~ 14593370 (-)
AMCG00006039 nduab,ndufa11,LOC106613708 coding upstream 189248 14647589 ~ 14651753 (-)
G155754 NA non-coding downstream 28272 14422504 ~ 14424746 (-)
G155717 NA non-coding downstream 82836 14369761 ~ 14370182 (-)
G155703 tpm4,LOC107653617,LOC107757474 non-coding downstream 129904 14318979 ~ 14323114 (-)
G155701 NA non-coding downstream 147321 14300475 ~ 14305697 (-)
G155655 NA non-coding downstream 286614 14166179 ~ 14166404 (-)
G155768 NA non-coding upstream 30949 14489290 ~ 14491929 (-)
G155783 NA non-coding upstream 111221 14569562 ~ 14569836 (-)
G155899 NA non-coding upstream 522043 14980384 ~ 14981621 (-)
G155957 NA non-coding upstream 641968 15100309 ~ 15105533 (-)
G155989 LOC105900582,LOC107680261,LOC107709904,LOC107550622,LOC107688471,LOC107585101 non-coding upstream 720710 15179051 ~ 15217634 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other downstream 111415 14336891 ~ 14341603 (-)
AMCG00005997 rad23ab,LOC107704496,LOC107717165 other downstream 281411 14159131 ~ 14171607 (-)
AMCG00005971 midn,LOC106573601,LOC105011665,LOC106613743 other downstream 754484 13664064 ~ 13698534 (-)
AMCG00005977 LOC106573600,LOC106613740,LOC105011525 other downstream 869667 13568467 ~ 13583351 (-)
AMCG00005946 ncan,ncanb,LOC107687726,LOC107554802,LOC107599474,LOC107719650,LOC106613725 other downstream 1296700 13123557 ~ 13156318 (-)
G155770 LOC103376870 other upstream 50892 14509233 ~ 14509614 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other upstream 221456 14679797 ~ 14682980 (-)
AMCG00006043 NA other upstream 324165 14782506 ~ 14784280 (-)
AMCG00006102 slc5a5 other upstream 540159 14998500 ~ 15007979 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other upstream 975091 15433432 ~ 15491642 (-)

Expression


Co-expression Network