AMCG00006029


Basic Information

Item Value
gene id AMCG00006029
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14393454 ~ 14401173 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006029
GTGTCAGTTGTGTGTCAGTGGTGACACAGATGCCTCCTGTTCTGTCTGTGAGTGCAGGACAAACTGCCACCTTGGACTGTAACATTGGGACAGtggataattatatttattggtACAAACAGATTCTGGATGGTGCTCCTCGATTTGTATTGACTtacaaacacattcacacaacttCTACCTATGGAACTGGGTTCTCATCCAGTCGCTTCAATTCCAGAGCCCAGACAAAACATGATTATCAGTTAATCCTGAGCCCTGTTGAGGCAGGAGACTCAGCAGTGGGGAGTTTTTGCATGAGTCTGTATCTGATCTTTACCACAGTGGTATTCGGCCAAGGGACAAAGCTCATTGTCACAGATCAAACTCTCCCGGCGCCCTCTCTGACACTGCACCGCCCGTCCACACAGGAGCTGGACAAGGGCGAGGCCACTCTGGTGTGCCTGGCCAGTAAGATGTCTGTGGGCTACGCCGACGTCAGCTGGACGGCCAACGGGAGTCCAGTGACCACCGGCGTGGTGACCAGTCCGGCCTCGGTGCAGGACGACGGCACCTTCAGCCTGAGCAGCTTCCTCAGCGTGTCCGCGGCGGACTGGGACAGCGACCGCAGCTACTCCTGCACCGTCTCTCAAGGAGGGTCTGCCTCCGCCTCCCGGCAGGTTAAGAAGTCGCAGTGCCTCCTG

Function

GO: NA

KEGG:

id description
ko04672 Intestinal immune network for IgA production

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006029 True 683 mRNA 0.55 3 14393454 14401173

Neighbor

gene id symbol gene type direction distance location
AMCG00006028 NA coding downstream 2346 14383670 ~ 14391108 (-)
AMCG00006015 cib3,LOC107687907 coding downstream 18511 14370409 ~ 14374943 (-)
AMCG00006014 NA coding downstream 121445 14264388 ~ 14272009 (-)
AMCG00006012 NA coding downstream 136716 14249791 ~ 14256738 (-)
AMCG00005996 LOC106613681 coding downstream 194540 14187248 ~ 14198914 (-)
AMCG00006027 NA coding upstream 40737 14441910 ~ 14445493 (-)
AMCG00006026 NA coding upstream 51845 14453018 ~ 14458341 (-)
AMCG00006018 slc1a6,LOC108437295,LOC105011479,LOC108230844,LOC107747749,LOC106613701,LOC107757933 coding upstream 90832 14492005 ~ 14507388 (-)
AMCG00006020 NA coding upstream 145007 14546180 ~ 14546493 (-)
AMCG00006019 NA coding upstream 145771 14546944 ~ 14549687 (-)
G155717 NA non-coding downstream 23272 14369761 ~ 14370182 (-)
G155703 tpm4,LOC107653617,LOC107757474 non-coding downstream 70340 14318979 ~ 14323114 (-)
G155701 NA non-coding downstream 87757 14300475 ~ 14305697 (-)
G155655 NA non-coding downstream 227050 14166179 ~ 14166404 (-)
G155652 NA non-coding downstream 300997 14089336 ~ 14092457 (-)
G155754 NA non-coding upstream 21331 14422504 ~ 14424746 (-)
G155768 NA non-coding upstream 88117 14489290 ~ 14491929 (-)
G155783 NA non-coding upstream 168389 14569562 ~ 14569836 (-)
G155899 NA non-coding upstream 579211 14980384 ~ 14981621 (-)
G155957 NA non-coding upstream 699136 15100309 ~ 15105533 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other downstream 51851 14336891 ~ 14341603 (-)
AMCG00005997 rad23ab,LOC107704496,LOC107717165 other downstream 221847 14159131 ~ 14171607 (-)
AMCG00005971 midn,LOC106573601,LOC105011665,LOC106613743 other downstream 694920 13664064 ~ 13698534 (-)
AMCG00005977 LOC106573600,LOC106613740,LOC105011525 other downstream 810103 13568467 ~ 13583351 (-)
AMCG00005946 ncan,ncanb,LOC107687726,LOC107554802,LOC107599474,LOC107719650,LOC106613725 other downstream 1237136 13123557 ~ 13156318 (-)
G155770 LOC103376870 other upstream 108060 14509233 ~ 14509614 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other upstream 278624 14679797 ~ 14682980 (-)
AMCG00006043 NA other upstream 381333 14782506 ~ 14784280 (-)
AMCG00006102 slc5a5 other upstream 597327 14998500 ~ 15007979 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other upstream 1032259 15433432 ~ 15491642 (-)

Expression


Co-expression Network