AMCG00006035


Basic Information

Item Value
gene id AMCG00006035
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14589371 ~ 14593370 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006035
ATGAAGTTATGGAAGTGTGCAGCCATCGCCTTGATGCTCTGTGGGGCCACGCTGTCAGTCTTCCTCAGTAGAAACATGATTCCTGGAGGAGCAGAGCTGCGGACCTGGCCttcgtcttcctcctcctcctccgtgtcCGGGGTGCGACGCAGGGTTGCTCGAGCCGTGGACAAGTCTGGCTCTCTCTTCAGGGACTTTTCATATTTGTTCCAAAGCTACACAGAGGGGGAGATCAAACAGCTGATCAGCGCCCTGGTGGACAGATCCGGGATGGAGAGGGACAGCCTGGAGGCCAGCCTGAGCAAGAGGACTAAGCGGGCCAAGAAAGGCCTGAAGCCGTGCTCGCTGAAGGAGGTGGAGGTGAGCGTGAGTGAGCTGGGGCTGGGCTTCGATGGCGACGAGACGCTCATGTTCCGGTACTGCAGCGGCAAGTGCACGGCGGCGCGACGCAACTACGACCTCACGCTAGAGCACATGAAGAAGCAGGGCCGAGTGAAGAAGGGCAAGGCCAGGCACAAGCCCTGCTGCCGCCCCACCAGCTACGATGAGGACTTCTCTTTtctggacaacaacaacaagtacCACACCATCAGGGAGGTGTCGGCCCGGAAGTGCGGCTGTGTGTGA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006035 True 627 mRNA 0.59 2 14589371 14593370

Neighbor

gene id symbol gene type direction distance location
AMCG00006019 NA coding downstream 39684 14546944 ~ 14549687 (-)
AMCG00006020 NA coding downstream 42878 14546180 ~ 14546493 (-)
AMCG00006018 slc1a6,LOC108437295,LOC105011479,LOC108230844,LOC107747749,LOC106613701,LOC107757933 coding downstream 81983 14492005 ~ 14507388 (-)
AMCG00006026 NA coding downstream 131030 14453018 ~ 14458341 (-)
AMCG00006027 NA coding downstream 143878 14441910 ~ 14445493 (-)
AMCG00006039 nduab,ndufa11,LOC106613708 coding upstream 54219 14647589 ~ 14651753 (-)
AMCG00006036 NA coding upstream 67215 14660585 ~ 14662509 (-)
AMCG00006038 NA coding upstream 70188 14663558 ~ 14670355 (-)
AMCG00006057 NA coding upstream 112181 14705551 ~ 14718570 (-)
AMCG00006058 dda1 coding upstream 172625 14765995 ~ 14778085 (-)
G155783 NA non-coding downstream 19535 14569562 ~ 14569836 (-)
G155768 NA non-coding downstream 97442 14489290 ~ 14491929 (-)
G155754 NA non-coding downstream 164625 14422504 ~ 14424746 (-)
G155717 NA non-coding downstream 219189 14369761 ~ 14370182 (-)
G155703 tpm4,LOC107653617,LOC107757474 non-coding downstream 266257 14318979 ~ 14323114 (-)
G155899 NA non-coding upstream 387014 14980384 ~ 14981621 (-)
G155957 NA non-coding upstream 506939 15100309 ~ 15105533 (-)
G155989 LOC105900582,LOC107680261,LOC107709904,LOC107550622,LOC107688471,LOC107585101 non-coding upstream 585681 15179051 ~ 15217634 (-)
G156002 NA non-coding upstream 611499 15204869 ~ 15212286 (-)
G156003 NA non-coding upstream 614150 15207520 ~ 15318177 (-)
G155770 LOC103376870 other downstream 79757 14509233 ~ 14509614 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other downstream 247768 14336891 ~ 14341603 (-)
AMCG00005997 rad23ab,LOC107704496,LOC107717165 other downstream 417764 14159131 ~ 14171607 (-)
AMCG00005971 midn,LOC106573601,LOC105011665,LOC106613743 other downstream 890837 13664064 ~ 13698534 (-)
AMCG00005977 LOC106573600,LOC106613740,LOC105011525 other downstream 1006020 13568467 ~ 13583351 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other upstream 86427 14679797 ~ 14682980 (-)
AMCG00006043 NA other upstream 189136 14782506 ~ 14784280 (-)
AMCG00006102 slc5a5 other upstream 405130 14998500 ~ 15007979 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other upstream 840062 15433432 ~ 15491642 (-)
G156206 klhl26,LOC107680559,LOC107597147 other upstream 1360706 15954076 ~ 15957090 (-)

Expression


Co-expression Network