AMCG00006036


Basic Information

Item Value
gene id AMCG00006036
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14660585 ~ 14662509 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006036
ATGGAAACCGAGAGAACCGATGTTCGTCTCGTCTCCGTCCTTCGCAGTGAGGACACGATGTCCGCTTTCTCGCTGACGGATCTCGTCCGAGGAGGGCTGAGCATGTCTGGGAGCCCCCCGGACCAGCAGGCTCTCCTGTCCAACGAGGAGCACTGCGAAGGCGATGTGTTGGAGGAGGACAGAGGGTCCTGGAGCCCCCCGTGCTTGGAGCTGCGGAGGAAGATCGCCGCCCAGGTGGAGAGCTACCTGTCGGACAAGAACCTGGCTGAGGACGCCTTCCTGCTGAAACATGTGCAGAGGAACAAGATGGGCTTTGTCCGGGAGCTGACGAGAGACTGGCGCACCACGCTGTATGCCACCCACTGCTCCGAGGCCCTGGAGGTGAACGAGGAAGGGACCAAGGTGAGGCGCCGGCGGCCTGTGCCCAACGCGCTGCTTTGCACCCCCACCAGCAAGCTGCTCCTGGCTTGGAACCTGCTGGGCGAAAGTCAGGCGGAGGAGGCCGGGCGGGGGCAGCACTGCTTGATGGAGACGGCCATGAAGCTCTTTGGGAATCACGGCGCCATCAGCTCCCTCCGCATCCTGCGCCCAGGCAAGGAGTTGCCACCCGAGCTCAAGAAGTACGCCAAGAAGCACTCGGAGCTGGGCCGCAGGGTGTGTGCCGTGGTGGAGTTCGAGTACCTGGAAGGGGCTCGCAAAGCCTACGAGGCCTTCAGGGCGGAGCAGGGTCTGGGCTTCGTCAAGGGCGTGAAGGTGGCCCTCCTGGGCAGCCGAGGCACGCGGAAGAGCTGCTATAGCCAGGACCCTGAGGAGTCGGAGGACCCGGAGGAAAGCGTGGACAGGGTGGCCAGCAAGAAGCCCACCAGGAAAGTCAAGTACTTGCCATACCTGTCGGAAGATTCCTCGGTTTACAGCTCCTCCGAGTCGGACTTCGCCCCTGCCTCGCCCAAGCCCGTCCGCAGGGTGGCCCGTCCCCAGGCCCTCTATGGCAGCCCTCTGGCCGTCCAAAGACCCCAGCCCTCCTACTCCTCCCGCCCCGACCCATTCGGCAGCCCCCTGAGCAGCCCTCTCCTTCCACGGAAGCTGTTCGCTGGTGGGCACGTGCCCTCCCCTCTCGTTGCCCCCGATTTCGGCAGCAGTCCTGTGGCAGTCGGCTCTATCGGGGACGGGCCCAGGTGGTCTGTTGACGGCTCCCCAGACAGCGGGGTCTTGGTCAGCAGCCCCTGGGTGCAGCGGCGCAAGACTGCTGCCCAGATCTTCTTCCCAGAGAAGCCCGGTCCTCCCCTGCCAGGCCTGGGGAGAAGGTCTCAGGTGCTGGTTGTGGTGGTGCGCCAGCCACTCGGTCCTGATGGGACCAGGGGCTTCCACAACTGCATTGGGAGAGGGAATTTCCTGCTCAGACACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006036 True 1407 mRNA 0.65 4 14660585 14662509

Neighbor

gene id symbol gene type direction distance location
AMCG00006039 nduab,ndufa11,LOC106613708 coding downstream 8832 14647589 ~ 14651753 (-)
AMCG00006035 NA coding downstream 67215 14589371 ~ 14593370 (-)
AMCG00006019 NA coding downstream 110898 14546944 ~ 14549687 (-)
AMCG00006020 NA coding downstream 114092 14546180 ~ 14546493 (-)
AMCG00006018 slc1a6,LOC108437295,LOC105011479,LOC108230844,LOC107747749,LOC106613701,LOC107757933 coding downstream 153197 14492005 ~ 14507388 (-)
AMCG00006038 NA coding upstream 1049 14663558 ~ 14670355 (-)
AMCG00006057 NA coding upstream 43042 14705551 ~ 14718570 (-)
AMCG00006058 dda1 coding upstream 103486 14765995 ~ 14778085 (-)
AMCG00006045 LOC107575641 coding upstream 142236 14804745 ~ 14813651 (-)
AMCG00006047 NA coding upstream 188272 14850781 ~ 14851879 (-)
G155783 NA non-coding downstream 90749 14569562 ~ 14569836 (-)
G155768 NA non-coding downstream 168656 14489290 ~ 14491929 (-)
G155754 NA non-coding downstream 235839 14422504 ~ 14424746 (-)
G155717 NA non-coding downstream 290403 14369761 ~ 14370182 (-)
G155703 tpm4,LOC107653617,LOC107757474 non-coding downstream 337471 14318979 ~ 14323114 (-)
G155899 NA non-coding upstream 317875 14980384 ~ 14981621 (-)
G155957 NA non-coding upstream 437800 15100309 ~ 15105533 (-)
G155989 LOC105900582,LOC107680261,LOC107709904,LOC107550622,LOC107688471,LOC107585101 non-coding upstream 516542 15179051 ~ 15217634 (-)
G156002 NA non-coding upstream 542360 15204869 ~ 15212286 (-)
G156003 NA non-coding upstream 545011 15207520 ~ 15318177 (-)
G155770 LOC103376870 other downstream 150971 14509233 ~ 14509614 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other downstream 318982 14336891 ~ 14341603 (-)
AMCG00005997 rad23ab,LOC107704496,LOC107717165 other downstream 488978 14159131 ~ 14171607 (-)
AMCG00005971 midn,LOC106573601,LOC105011665,LOC106613743 other downstream 962051 13664064 ~ 13698534 (-)
AMCG00005977 LOC106573600,LOC106613740,LOC105011525 other downstream 1077234 13568467 ~ 13583351 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other upstream 17288 14679797 ~ 14682980 (-)
AMCG00006043 NA other upstream 119997 14782506 ~ 14784280 (-)
AMCG00006102 slc5a5 other upstream 335991 14998500 ~ 15007979 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other upstream 770923 15433432 ~ 15491642 (-)
G156206 klhl26,LOC107680559,LOC107597147 other upstream 1291567 15954076 ~ 15957090 (-)

Expression


Co-expression Network