AMCG00006039 (nduab,ndufa11,LOC106613708)


Basic Information

Item Value
gene id AMCG00006039
gene name nduab,ndufa11,LOC106613708
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14647589 ~ 14651753 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006039
GCGCAATCTCGCGATAGTTGGCGTTCCGGGGTGTCCTTGTCGGATCCGAAATGGGTTACTGGGATCTGCAGGAAGGCAAGGACTGTGTCCAAAAGACATGGATCACTACCAAGCTGGGTACTGCTTTGGGCCTGGTTGGCTCTGCTTATCACATCGTGGCATTCCAGCCTGATTCTGCCATCCAGGCGGTCCAGAGGGCCACATCGGGCACCATGACCATGGCGACTCTTGGGGCCATCTTCGGCATGGCCACCTGTCTGAGTGCCCAGGCCAGGGATGAGCCAGACGACCCGCTCAACTACTTCATCGGTGGCTGTGCATCTGGGATCTTTCTTGGAGTGCGAACTCACAGCTACATGACGGGAACTACAGGCTGCCTGGGGCTGGGGGTGTTGGCTGCGTTAACCAAGATTGGGAAGAAGGAAGGCTGGAGGATAGCGGGATCACCCAAGCTGTAAATGTCTAAAGCAGACCTTATATTGACTTGTAAATTGATTGCtatttctgttaaataaaactatttaaaagagactttgcattacaaaatgattaaataaatgaattagtGCCTTTATCACCACTGGACCCACAATTGGAATGACACAAATGGAATACCTGTATTATTAAGACCTTGtgataatatattgtttgtgtcattttaattgtgGGTTCAGTATTGATCTAGATACACATTGTCTACACCCAGTAATTTGAGTACAATGCAGTGGCTAAAATAAGGGgatttg

Function

symbol description
ndufa11 Predicted to act upstream of or within mitochondrial respiratory chain complex I assembly. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 14. Orthologous to human NDUFA11 (NADH:ubiquinone oxidoreductase subunit A11).

NR:

description
PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K03956 NDUFA11; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 11

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006039 True 746 mRNA 0.47 4 14647589 14651753

Neighbor

gene id symbol gene type direction distance location
AMCG00006035 NA coding downstream 54219 14589371 ~ 14593370 (-)
AMCG00006019 NA coding downstream 97902 14546944 ~ 14549687 (-)
AMCG00006020 NA coding downstream 101096 14546180 ~ 14546493 (-)
AMCG00006018 slc1a6,LOC108437295,LOC105011479,LOC108230844,LOC107747749,LOC106613701,LOC107757933 coding downstream 140201 14492005 ~ 14507388 (-)
AMCG00006026 NA coding downstream 189248 14453018 ~ 14458341 (-)
AMCG00006036 NA coding upstream 8832 14660585 ~ 14662509 (-)
AMCG00006038 NA coding upstream 11805 14663558 ~ 14670355 (-)
AMCG00006057 NA coding upstream 53798 14705551 ~ 14718570 (-)
AMCG00006058 dda1 coding upstream 114242 14765995 ~ 14778085 (-)
AMCG00006045 LOC107575641 coding upstream 152992 14804745 ~ 14813651 (-)
G155783 NA non-coding downstream 77753 14569562 ~ 14569836 (-)
G155768 NA non-coding downstream 155660 14489290 ~ 14491929 (-)
G155754 NA non-coding downstream 222843 14422504 ~ 14424746 (-)
G155717 NA non-coding downstream 277407 14369761 ~ 14370182 (-)
G155703 tpm4,LOC107653617,LOC107757474 non-coding downstream 324475 14318979 ~ 14323114 (-)
G155899 NA non-coding upstream 328631 14980384 ~ 14981621 (-)
G155957 NA non-coding upstream 448556 15100309 ~ 15105533 (-)
G155989 LOC105900582,LOC107680261,LOC107709904,LOC107550622,LOC107688471,LOC107585101 non-coding upstream 527298 15179051 ~ 15217634 (-)
G156002 NA non-coding upstream 553116 15204869 ~ 15212286 (-)
G156003 NA non-coding upstream 555767 15207520 ~ 15318177 (-)
G155770 LOC103376870 other downstream 137975 14509233 ~ 14509614 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other downstream 305986 14336891 ~ 14341603 (-)
AMCG00005997 rad23ab,LOC107704496,LOC107717165 other downstream 475982 14159131 ~ 14171607 (-)
AMCG00005971 midn,LOC106573601,LOC105011665,LOC106613743 other downstream 949055 13664064 ~ 13698534 (-)
AMCG00005977 LOC106573600,LOC106613740,LOC105011525 other downstream 1064238 13568467 ~ 13583351 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other upstream 28044 14679797 ~ 14682980 (-)
AMCG00006043 NA other upstream 130753 14782506 ~ 14784280 (-)
AMCG00006102 slc5a5 other upstream 346747 14998500 ~ 15007979 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other upstream 781679 15433432 ~ 15491642 (-)
G156206 klhl26,LOC107680559,LOC107597147 other upstream 1302323 15954076 ~ 15957090 (-)

Expression


Co-expression Network