AMCG00006046


Basic Information

Item Value
gene id AMCG00006046
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14852157 ~ 14860735 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006046
ATGTACGACAGACAGCGTTATGACAGCCCTCCCATGTACAGCCCTCCCTACACCCACTCTCCCAATGGCTTCCCCCCGCCAGGTAGCTTCATGCCTCCAAAGAGTGATTTTGACCCCTACCCTCCACCACCGGGCTCCTATTACCTCGAAGAGAAGCCTCAGTACTTCTATAAGTGGCGCTCTCCTCCTGGAATCATTAAAATCCTGGAGGGCTTGATCATCGTGTTGTGCATTGCAATCTTTGCCTGCGTGGCCTCCACGTTGGTCTGGGACATGCAGTACGGCTATGGGATGGGCATGGGGGTGGGCATGGGGGcagggatggggatggggatgggcATGGGAGGGTACGGGATGGGAAGCTATGGCGTAGGGGGTTACGGTTCAGGAGGGTATGGCATGGGCTACTACAACACCTACCCCACCCCCTACTCGGCCAAGACCAGCATGATCGCCATGGCGGCCATCAACTTCATCGCCTCCCTGGCGGTCTTCGTGGCCAGCTTCTCCAAGACCAGCACCACCAGGAGCCGCAAGTTTTACCTGGTGGTGCTGGTGATCAGCGTCATCCTGGCCTTCCTGCAGGGCATCATCAACATCGTCTACATTGTGGGGGTCAACCCCATGGCGCAGAGCATGCGTGCCAGCTACTACGACCCCATGCTCATGATGTGTAACTCCATGTACGGCTCTGGTGTGGGAGGGTACCCGTCTGTGGGTGGCATGTACAACCAGTACCTGTACCACTACTGCTACGTGGACGCTCAAGAGGCAGTGGCTATGGTCTGTGGATTCCTGGTTGTCATTTCCCAGTGTATCATCGTTTACTTTGCCCAAAAAACCCGCAGCAAAATCTGGAGGTACGGCAAGCCAAACATCTACTGGGAGCAACCTCTCACTGGAGCACCTGGAGGCCACGATGTGGAGGACTGGGTCAACAACGTGGAAGGTGGAGAAAGCATCCACGATGCTCCCACATTGGTGATGTCTGAGAAACCAACCTCCCCTCTCAATGCTGTGAAAACCCCCAGCCCATACCCGATCAAATCTGACAGCTGCTTTAGCTCCGAGCCCTACAAGGACCCTGAtttcacGGACACCACCACCAGCCGGCCCTCAGACGAGCCATCTCGGGGGCTGAGCTCCAGTCCGTCAGAGGAGGTGGGTGGGACACGGCGGCCCTCAGCCTGGCGGGGCAGGCGGCGGCGCAGAAACCCCGAGCTGGACGATTCGCAGTATGAAACAGACTACACCACGGGTGGAGAGACCTGCGGGGAGCTGGACGAGGATCAATGGCACAAGTAA

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006046 True 1305 mRNA 0.58 4 14852157 14860735

Neighbor

gene id symbol gene type direction distance location
AMCG00006047 NA coding downstream 278 14850781 ~ 14851879 (-)
AMCG00006045 LOC107575641 coding downstream 38506 14804745 ~ 14813651 (-)
AMCG00006058 dda1 coding downstream 74072 14765995 ~ 14778085 (-)
AMCG00006057 NA coding downstream 133587 14705551 ~ 14718570 (-)
AMCG00006038 NA coding downstream 181802 14663558 ~ 14670355 (-)
AMCG00006044 NA coding upstream 5974 14866709 ~ 14875721 (-)
AMCG00006032 NA coding upstream 28405 14889140 ~ 14907158 (-)
AMCG00006033 LOC107589798,LOC107718068,LOC107722564,LOC107585128 coding upstream 59668 14920403 ~ 14931385 (-)
AMCG00006096 NA coding upstream 121066 14981801 ~ 14992261 (-)
AMCG00006103 NA coding upstream 170252 15030987 ~ 15031803 (-)
G155783 NA non-coding downstream 282321 14569562 ~ 14569836 (-)
G155768 NA non-coding downstream 360228 14489290 ~ 14491929 (-)
G155754 NA non-coding downstream 427411 14422504 ~ 14424746 (-)
G155717 NA non-coding downstream 481975 14369761 ~ 14370182 (-)
G155703 tpm4,LOC107653617,LOC107757474 non-coding downstream 529043 14318979 ~ 14323114 (-)
G155899 NA non-coding upstream 119649 14980384 ~ 14981621 (-)
G155957 NA non-coding upstream 239574 15100309 ~ 15105533 (-)
G155989 LOC105900582,LOC107680261,LOC107709904,LOC107550622,LOC107688471,LOC107585101 non-coding upstream 318316 15179051 ~ 15217634 (-)
G156002 NA non-coding upstream 344134 15204869 ~ 15212286 (-)
G156003 NA non-coding upstream 346785 15207520 ~ 15318177 (-)
AMCG00006043 NA other downstream 67877 14782506 ~ 14784280 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other downstream 169177 14679797 ~ 14682980 (-)
G155770 LOC103376870 other downstream 342543 14509233 ~ 14509614 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other downstream 510554 14336891 ~ 14341603 (-)
AMCG00005997 rad23ab,LOC107704496,LOC107717165 other downstream 680550 14159131 ~ 14171607 (-)
AMCG00006102 slc5a5 other upstream 137765 14998500 ~ 15007979 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other upstream 572697 15433432 ~ 15491642 (-)
G156206 klhl26,LOC107680559,LOC107597147 other upstream 1093341 15954076 ~ 15957090 (-)
AMCG00006083 NA other upstream 1593549 16454284 ~ 16462165 (-)
AMCG00006118 NA other upstream 1644629 16505364 ~ 16521689 (-)

Expression


Co-expression Network