AMCG00006047


Basic Information

Item Value
gene id AMCG00006047
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 14850781 ~ 14851879 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006047
ATGTACCCAAGAATCACGTCAGACACCCAGCGACAGGAGTACAAGAGGGAGTTTGACTCGGACCTGAAACGCTACAAGCGACTCTGTGCTGAAATGGACGACATCAACGACCAGATGAACAAACTGAGCCGGGAGCTGGACACTCTGCAGGAGGGCAGTACAAAATACCAGGGGGTTGCCGAAGAGTTCAACCGACTGAAGGACGTGAAACGGACCCCGGACTACCAGACCAAGAAGCTGGAGTGCCGAGAGCTGAGACACAAGCTGTTCCACATCAAAAGCATGGTGAAGAACTATGACAAGGGGCACTCTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006047 True 315 mRNA 0.53 3 14850781 14851879

Neighbor

gene id symbol gene type direction distance location
AMCG00006045 LOC107575641 coding downstream 37130 14804745 ~ 14813651 (-)
AMCG00006058 dda1 coding downstream 72696 14765995 ~ 14778085 (-)
AMCG00006057 NA coding downstream 132211 14705551 ~ 14718570 (-)
AMCG00006038 NA coding downstream 180426 14663558 ~ 14670355 (-)
AMCG00006036 NA coding downstream 188272 14660585 ~ 14662509 (-)
AMCG00006046 NA coding upstream 278 14852157 ~ 14860735 (-)
AMCG00006044 NA coding upstream 14830 14866709 ~ 14875721 (-)
AMCG00006032 NA coding upstream 37261 14889140 ~ 14907158 (-)
AMCG00006033 LOC107589798,LOC107718068,LOC107722564,LOC107585128 coding upstream 68524 14920403 ~ 14931385 (-)
AMCG00006096 NA coding upstream 129922 14981801 ~ 14992261 (-)
G155783 NA non-coding downstream 280945 14569562 ~ 14569836 (-)
G155768 NA non-coding downstream 358852 14489290 ~ 14491929 (-)
G155754 NA non-coding downstream 426035 14422504 ~ 14424746 (-)
G155717 NA non-coding downstream 480599 14369761 ~ 14370182 (-)
G155703 tpm4,LOC107653617,LOC107757474 non-coding downstream 527667 14318979 ~ 14323114 (-)
G155899 NA non-coding upstream 128505 14980384 ~ 14981621 (-)
G155957 NA non-coding upstream 248430 15100309 ~ 15105533 (-)
G155989 LOC105900582,LOC107680261,LOC107709904,LOC107550622,LOC107688471,LOC107585101 non-coding upstream 327172 15179051 ~ 15217634 (-)
G156002 NA non-coding upstream 352990 15204869 ~ 15212286 (-)
G156003 NA non-coding upstream 355641 15207520 ~ 15318177 (-)
AMCG00006043 NA other downstream 66501 14782506 ~ 14784280 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other downstream 167801 14679797 ~ 14682980 (-)
G155770 LOC103376870 other downstream 341167 14509233 ~ 14509614 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other downstream 509178 14336891 ~ 14341603 (-)
AMCG00005997 rad23ab,LOC107704496,LOC107717165 other downstream 679174 14159131 ~ 14171607 (-)
AMCG00006102 slc5a5 other upstream 146621 14998500 ~ 15007979 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other upstream 581553 15433432 ~ 15491642 (-)
G156206 klhl26,LOC107680559,LOC107597147 other upstream 1102197 15954076 ~ 15957090 (-)
AMCG00006083 NA other upstream 1602405 16454284 ~ 16462165 (-)
AMCG00006118 NA other upstream 1653485 16505364 ~ 16521689 (-)

Expression


Co-expression Network