AMCG00006082



Basic Information


Item Value
gene id AMCG00006082
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 15483162 ~ 15488681 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00006082
ATGGACATGGTGAAAATACCCACCCGGTCGCCACACGAACCAGACGGAAAAGAGGCTCTCAAAGGCGGAACCATGGTGTCGGTAGCTCCTCACGCCTTGATCCCAGCTCCTCTGATTGGCAGGGAGTCGCTCAAGTCCTCACACATCCACTTCAGCTCTGGACACAAGGCCGGTGGGACGCCTGTGAAGACCATCTTCCAGAGTGACTTTGGCGCCGTCGCCGAGCTCCCCAAGAGGCACCAGGTCCAGATGCCCAAGCCAGCTGAggtggagcacaaggacctgcGCCATATCAGGGAATACCTCACAGAAACCAGAAGCTCATTCACCCCTCACTCTCTGGAGCCGTTAAGCCACACCCTGGCTCAGTCCAAACTGACCACCAACTTCAAGATGCATGGGGACGGAAAGCACGTCACCTTCCTCACCATGGCGTCTGAAGGCTTCCCGCACCACGCCCCCGCACCCATCGCTGACAGAGCCCAGCTGGTTAATAATGCCAGGAAGAGTCACaACGGCCCGTCTTCACTGCCGATGGGAGATGAACAGAAAATCCACGAAACCCTAACCACCTACGTCTCCTCCTTCCACAAGAAAGAAATCCCCAGGTTTGAGGCACCTAAAGGAATTCTGAAGATGAATCTGGGGGACTATCGAGGGGACAGCCTATCTACCACCACGTCTGACTCCTACTGTCTGATCAAACCAAGTGTCGTCTCCCGTgttcaaataaacagaaacatcaGCTCTGTCCCAATGGGAGACACCCAACCTGAGCGAAATCGGGAGAGTGTCTCAGTCACCTCAAACAGGCTGGACTTCCCTCAGGGGTCCAGAGAGGTCCCGGCTCATGTGGTTGGCCCAGGCCAGAGGACAAGGAGCAACGTAGAGATCGGGAAGCCCAGGATGGGGGGGCTGTTCTACAGCACCACTGCGAGGGATGCCTACCAGGCCCACACCTCTGCCAGGGCCCGACCAGACAAACACCCACCCAGCCATTTGTTCCCATCTGGAAGCAACCAGGATACGGGCATGACAACGATGCAGAGAGACTATCAGCCGCCGCAGCTGGGCAGACAAGTCTTAAACCCATCTCGCCTGCATGAGATTTCAGCTTGCCACATCACTGCCCCCTGCAGGCAGCAGTACTTCACTACAACCCAGAAAGAAGCCTTCTGCCCCAAATCAGCCCCTCGCCTTGCAGTGCATCATGGGAGAGATCAGAGTAGCCACATGCCTTTTTAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00006082 True 1245 mRNA 0.56 8 15483162 15488681

Neighbor


gene id symbol gene type direction distance location
AMCG00006079 arrdc2,LOC106573914 coding downstream 2844 15469241 ~ 15480318 (-)
AMCG00006081 gamt,LOC107747770,LOC107597217,LOC107685360,LOC107553529,LOC107757934 coding downstream 82198 15397252 ~ 15400964 (-)
AMCG00006080 NA coding downstream 92581 15378222 ~ 15390581 (-)
AMCG00006101 LOC106573875 coding downstream 301845 15161321 ~ 15181317 (-)
AMCG00006099 kank3 coding downstream 359834 15104332 ~ 15123328 (-)
AMCG00006068 NA coding upstream 8072 15496753 ~ 15529324 (-)
AMCG00006067 upf1,LOC105907049 coding upstream 56157 15544838 ~ 15559349 (-)
AMCG00006069 pgpep1,LOC103360783,LOC104958139 coding upstream 76781 15565462 ~ 15574687 (-)
AMCG00006075 NA coding upstream 284997 15773678 ~ 15776508 (-)
AMCG00006085 NA coding upstream 289526 15778207 ~ 15784001 (-)
G156049 NA non-coding downstream 51232 15427308 ~ 15431930 (-)
G156048 NA non-coding downstream 59312 15417978 ~ 15423850 (-)
G156028 NA non-coding downstream 115521 15366104 ~ 15367641 (-)
G156014 NA non-coding downstream 152616 15272813 ~ 15330546 (-)
G156003 NA non-coding downstream 164985 15207520 ~ 15318177 (-)
G156104 NA non-coding upstream 93176 15581857 ~ 15584766 (-)
G156113 NA non-coding upstream 126881 15615562 ~ 15615787 (-)
G156203 NA non-coding upstream 458527 15947208 ~ 15947527 (-)
G156207 NA non-coding upstream 506106 15994787 ~ 16000039 (-)
G156225 NA non-coding upstream 574052 16062733 ~ 16063072 (-)
AMCG00006102 slc5a5 other downstream 475183 14998500 ~ 15007979 (-)
AMCG00006043 NA other downstream 698882 14782506 ~ 14784280 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other downstream 800182 14679797 ~ 14682980 (-)
G155770 LOC103376870 other downstream 973548 14509233 ~ 14509614 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other downstream 1141559 14336891 ~ 14341603 (-)
G156206 klhl26,LOC107680559,LOC107597147 other upstream 465395 15954076 ~ 15957090 (-)
AMCG00006083 NA other upstream 965603 16454284 ~ 16462165 (-)
AMCG00006118 NA other upstream 1016683 16505364 ~ 16521689 (-)
G156341 NA other upstream 1162859 16651540 ~ 16680772 (-)
AMCG00006127 NA other upstream 1459316 16947997 ~ 16963650 (-)

Expression



Co-expression Network