AMCG00006086


Basic Information

Item Value
gene id AMCG00006086
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 15789347 ~ 15818856 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006086
ATGGCCACGGAGGGTTTTCAGTACCGGGCGCTCTACGTTTACAACAAAGACTGGGAGGAGGACATTGACCTCCAGCCCGGGGACCTTCTGATCGTCAACAAGGCCTCTCTGTTGTCCCTGGGCTTCAAGGAAGGTGACGAAGAACATCCCGAACGGCTGGGCTGGATGGTGGGGGTGAATGAGCGCACAAAGCAGAGGGGCGACTTTCCCGGGACCTATGTGCAGTACATTGGGCCTATCAAGATGTCACTGCCACCCAATCAGCCTCGCTTCCAGAGACCCCTGCCCGCCGCCCCCAGGCCTGAGCCTCCGCCTGTGCATCAAGCCATCTCTATCCTGGATTTGACGGAGCAGTTTGCACCACCCGAAAGTGCTCCCCCAATTATGGTCAAGTTGGTGGAAGCCATCGAGAAGAAAGGTCTGGACAGTGAGACCCTGTACCGGACGTCTGTCTCCTCAGCTGGCTTTGATCACAGACTGAGTCTCGAGCTGTCTACTGGGAACGTGGGACAATTTGACATCCAGGTGCTGACTGAGGCTCTCAAAGGGTACCTGCAGGCTCTGCCCACCCCGGTCATCCCAGCGTCCGTCTATCCAGACCTCCAGACCACACTGCAGCAAGGAACAGAAGCTGTGAGGTTGGAGAACTGTAAACCGCTGATGTCAGTGCTGGAGTCCCCGGCCGTGCCCCTGCAGAACCTCCTCACGCTGCAGTACCTGCTCCGCCACCTGGGCAAAGTGTGCCAGAACTCAGAGAGAAACGGCCTGGACGGCCCCACCCTCGGCCAGATCTTCGGCCCACTGCTGCTCCGGCTTGCTGGCACTGGATTGGAAGTGAGTCAGGACCTCCCGGTTCTGGTGCTGGAGATATTGTTGGCAGAGAGGACCTGGGAGCAGGAACAGAGCCCACCAGCTCTGCCTCCGAAACCTCCCAAGACCAAGGCCTTGACCAGCTCGCTCACCAATGGCAACAGTAGCCTCCTGGCCGATGCAGAATGGTACTGGGGTGAAATTTCCAGAGAGGAAGTGAATGAGAAAATGCGAGATACACCTGACGGCACTTTTCTGGTTCGGGATGCTTCGAGCAAAGTTCAAGGAGAGTACACCCTCACCCTCAGGAAAGGAGGGAACAACAAGCTGATCAAAATTTTCCATCGAGGGGGGAAGTATGGATTCTCTGAGCCTCTGACGTTCCTCTCTGTGGTAGAGCTGATCAATCACTATCGCCACGAGTCACTGGCACAGTACAACGCCAAACTGGACACCCGGCTTTTGTACCCCATCTCCAAGTACCAACAGGACCAGGTGGTGAAGGAGGACAGTATCGAGGCAGTAGGGGAACAACTACGGGTTTATCATGAGCAGTACCAGGAGAAGAGTCGCGAATACGATATCCTGTACGAGGAATACACCCGCACCTCCCAGGAGCTACAGATGAAGAGAACCGCCATCGAGGCCTTCAACGAGACCATTAAGATCTTCGAGGAGCAATGCGAGACACAGGAGCGCTACAGCAAGGAGTATATTGAGAGGTTCCGCCGAGAAGGCAATGACAAAGAGATCCAGAGGATCCAGAGCAACTCAGAGAAGCTGAAGTCTCGGGTGACCGAAATCCACGACAGCAAGAGGAAGCTGGAGCAGGACCTGAAGAACCAGGCGGCGGACAACCGGGAGATCGACAAGCGCATGAACAGCCTGAAGCCCGACCTCATGCAGCTGAGGAAGATTCGTGACCAGTACCTGGTGTGGTTGACACAGAAGGGCACCAGGCAGAGGAAGATCAACGAGTGGCTAGGGATCAAGAACGAAGCTGAGGATCTGTACTCCATGATGGACGATGAGGAGGACCTACCCCACCATGACGAACGCACCTGGTATGTGGGCGACATCAAGCGTGCACAGGCCGAGGAGCTGCTGAGGGGCAAGCGGGACGGCACCTTCCTCATTCGCGACAGCCAGTCACAGAAGGGCTCCTTCGCCTGCTCAGTGGTCGTGGATGGCGATATCAAGCACTGCGTGATCTACAAGACCGTCACGGGATATGGATTTGCAGAGCCGTACAACCTCTACGCTTCCCTGAAAGAGCTGGTCCTCCACTATAAGCACACCTCCCTGGTCCAGCACAATGACTCTCTGAATGTAACGCTggcctgtcctgtcctgtcccagCAGCCCAGGTGAACGGCTGAGTGCCAACCAACATCCTCCGCATCCAAGATGaaactggggaaaaaagaaacaaaaaggaaaacaaaaatatgccaacttttatatataaaagatgAACCCACACCAACAACAAACGACcttcatacaaaaacaaaagaagcacaCAAATTTAAGGCCGATCATGTCTTGTGTAGAGGTAGGGTTAGCGTGAACTCTTAAAACTCTAGTCCCCTGCAGTAAAGCCCAAGGAAGTGACTCCCGTCTTCATCCTAGCATAAAACCCTTTCTATATCAAAGGAAGTGGATCAGACCTTGTCCGGAGGTTGCACTGTCGTGGATACGGGCATCCACTAACAAAGGAGGGCCCccgtttgttttcttgtttgtttttaatccctGGATTTGTTAAGGATTTTGCAAAGcttcatttttccttttaaacgGCTCAAGAACAGCACGGCCCACCTGCTCTACGCTTCAGTGGACCAGGAAACCTGCAAGATAAAAGCTTTCttcatacttgttttttttttttttttcttgttgaacAGCTGCTGTGGATTTccttacattttacattcttcATTTTACGAAGGAAAACAATTTTGTATGCCCAAATCTTTCTTGAACTCCCTCCCCCCCCGTATGAGGACGTGAAAAGGAATCCAGTGGCAATCTCTCCAGTGAGCAGATTCTAGTTGTTGTTAGCAtccttctttaaaataaaatcacaaaagaaGCAGAACAACCCTGACTTTTTGGAGAAAGAACTTTCAAGCTTTTGTAAGATGGCGGTGCTGTTGTGAGAGCCTtgtggacaaaaacaaataaattaaaagaacacTGCTGTCTGCTCTTtttatctgatttttttttttggttttcccAAGTCTTGGAATATTTGGGCATGTACTCGGAGTTCAGATGTCGCACATTTCAGTTTAACTGAATAACTGACAGACTCCAGCTTTGGACCGGAAATGGCTGTGAGTGTTGACGGCCTGACTTTACTCTCGCAGAGCGACACAGTCCGTGGGTGGAGCTGTGTAATCCTTTACACATAATCTCAGCCCTCAGTGTGACTTCGTGAGCAGTTGTTGCCCAGTTTTACTATTTCAATTTGCTTAACCGTTTCCAgactgtaatataatatttttgtttgtttttagacaCAAGCTAATCTATAGAGCTGTAgattgcatttctttaaaaagaaaaaaaaaagaaaagaaaaaaataactgagaTACTGTAGGCAATTTCTGCAATATGCAACCATAAGTGATTTTGGCATTGATTGGCTGATCAGTATATAGATGTAGTCAGCTAAATgctttcttctgttttcattgtGGATTCTGCTGGAGGGAACAAGGTGACAAGTTAACACAAGCCAAATGAAGGACTTCTTTCATGTAGCAAAAGAACTGATCCTTTATTATAAGCTTGAATGTTTTGgtgcaacaaaaaaacatgcatatataatgtatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatggaaaCTTTTCTACCAAGAGATTATCTAAGCACTTGGTAATACCAGtactattacatttaatataaatatatatatgtatatatctatatctataatatagatatatagatatatctatatagattTAGATGGATATATTTACAAGAAACAGAACAACTATATCTCTCAGCTCCATATAAGTGCTTGAGGAGGTATAATATCTGTTTGCATGGTAGACTTTCTTGTAGTTGCTGCCAATACTCTTCTTGAGTTAACCTGCTATCGAACCGCAGTACAGGAACGGAGGAGTGCAGCCGTTGGGTGCGCTGTTGTGTTGTTCCTGATGCAGGTGTGACAAAGGGTGGAGGGTAGAGGACAGCTCAGTTGGACACTGGTACTTTGTTTTGATTCATGTTTAGTCATCCCACCATGCTGTTTAAACCCATTCTGACAGGCCCATATGCTCAGACAGTGTCTTTAGCTTCTCTGGAGTCAAGCGACCCCCTCTCGGTGTCATTACGGAGGTCTTGCGAGGAGTTCCCAAAACAACCAGCATGAATAACGTTTGAAAAACCTTTTAGGCGAATCCaagatttgtgttgttttttcttttccttttgcgTTGCTCATAAAGACATTAAGTTGCACAGATTAATAATCGTGGTGGGGTTTAGGTCCTTTGCAAAAGATCCTTCAGTCAAAGCGGGGCCAGGATGCTTGGGCTGGGAGAGCCAATGGGAGGGTTGTCAGAAGTGCCTTTTGCCCTTACACATTGACTGCCATCATTTGagattttcttgtttatttgagcGAAGAGAGCCATCGTTCTTTACCCACCCACAAACTAAAAGCAGTGCTAATCACATTTGTATCTTCCTCATGTTTGCTTTAGATGTTATGGTCTTctgcaatgtattttgaactaCAAGTGATTTGAAAACGGCATACACGGAATCAAGGGTGTAGGTTTAGATTTGACAGGAACAGAGGGGTGGCAGCAGTTTTGAAACCAGAATGTGTTATGAAATTAGAACCCTCTTTTTTTGTCATAGTATTATTTCTGGGCTGTTTAATTTGCTAAATCCTGCCGTGAGGAAATCCAACCACTTCTCATTGTCTACAGGATCCTTGTTGAGTCACCTTGACTGCCCACTTCACTTTTTTCAGGCTTTCCCTGCTCATTAAACAGGTGACACTTTGCACAAAGGAGGACTTTGAATTGTATCACTTTAGTTGCCaagaattgttttgaaaagcgACATTTCAAAAGGAATAAGACATTGAACAGAATGGAGAAATAAAGTACTTttagtattaattatttttatctcAATTTCTGTAAGGATCACACAGCTGTTCCTGTTCCTAAAACTGTTCCACAGGGATTTAAGCCTCTCTTTTAAATTGTGGGCAggatatatataaatgcaaaaataaataactacccCCTATGTCCAATTAAATAAAGGCCAGGAGAATTTGATTAATAAACTTGATGAGctcagtttaaatatatatatatataaataatttcattttatacagtgtcttgatttgtttttttcttccaccaATTATTGTATGAATCGCTTCATAAAGCAATCTGTATCGGTAGCAAACTGTATTGCCaaagaaactatttaaaaactgCTTGAATTATTTCAGGAAGGTAGCCATTcgtaggattttttttttttttttttttttttgcttcaacATTAGCCTTTGGACATACACCTACCAATTGTgaattataaaaacatgatgCAATCAAGGATTTGTTTTGCAGAGGCTTCTCAATTCTACCTAAGGAAGATCTGTTGGTGAATAGTTTTGATTGAATAGTTTGATTTTACAGTCACGAACTGGGATTACCGTGAACAATAACACAATCTTTACAGCAGCTCCTTCAGTTCTAGCTGACTTCTCTGGTAGTGTCGTTAATCTGAGCTGAGTTTACCAGCCCACCCAAGCCTGTTAGTTCTGGACAGGGCTGAGGGATTTAAAGAGGTTTTCAGATGGTGATCTTTTTCCTTCCAAATTCACACTGGAGGCTTGGGAGTGTGCGTCTgctcttgtattttgttttcgaTGGACTGAAGTTGTACTTAAACGTTCTTCgctgtatacaaaaataattggtttggtatgtttttttttgtttatttagattttttcccaACAAAGGACTGCGCATGGGCTAAACTTGCCAGGAAGGTGGTGTGGTAATCGGACACCAGAATACTGGGGAAAACCGTGGTCAATGCACCAAGCCATCTCAAGCTAAAGTGTTCAGTACCGACATGTTGTAAACTCAGTGGaagtatttgtctttttaattttgggCATAGAATCGGAACAAACTTTTGGAACAAACTGTGAAATTCTTAATGTTTTAGTTAAGAAACCAAGCTGGATAAAATCTAAAAGGAAAAAGGGGGCGGCCAGAGAGTTGGGGGGGATTTGTATCCCACAACTTCATACTCATTTTGCTTGGTTTAAAATGGGCACCAACGTCTTCAGTGGTAAACACAAATCCATTATTTCAGTTAAGGCATCAGCTTATGCAGTCCAGGACAGAGAGAAaagtggaaatgttttaaatctttacCCTAATTTACATACTTACatctacacacatacatgcatatatatgtagAGAGAGATGGATCAGTTTGAACAGCTTCGGAATGTGTTGATTTACCTTGAAAGTATTAACACACAAGacatacagaaatgtatattctaTATATGACAATTCTCCTTGGTACCTATAGTATAGTTACATGATTAAACTATTGTGTTCAGTGTCCACTTTATAGATTAGACTTGTGAATATTGTGAGACactgaacttaaaaaaataaaacttctaCAGATTCAGAAATAAAGGAGAAGCATTTGAAcaaatccttttattttattagaagtttaaatagttttattgtcATTTCCATCATCATTGtcaaatttaacacattttacgCATCCTTCTAAGGATGTTGAGAAGGCTATTATGCCCCTACATTTCACAAACGAATGTTAgtgtcaattaaatatttttacattggaAAGAAAGTAAGGTGTGCAAACTGTTATCCAGCACTCTACATATGTATTCAGTTGTCTGTGTCCAAGTATGTGCTTCAGTTTATCTTTGTCTTCCATCTCGGCCACTTTAGGAATCGGATCGCCAAATTACACTCTTTAAAGTTACGCTGATGCTGATATTTCTGTCCAATTTGTAGATGCTGAACGTTAACCAGACAAATGTAATCATAGTAGCCGTACAGATTTTCACGACAAAGCATCAAGTTGTGTacactttttcattattattattataataaatgaaaggGAGCAGCCAAAAGACATGAGGTTTTATCAAGCTAAGATCATGCTCCTTTGTCAATGACCCTGATTGTTAAAGCTGTCCCTCACTGCCTCGTTTTGATTGGCACAGGCCTAGTTTTGTATGGTTTGACGACGACTCATAATATAAGTTGATGggatttcttctttttttgtccTTATTGGAGCAGGAAAGCACCCAtcaaatgtttgtgtgtttatgcgTGCATGTGCGTGCCTGAGAGTGTGCACATTGGGGGTTGAGGGGTGGGGGAGGCATTTATATTGCCAATAGTTTAAATCTGCTGAATGCACTACAGAGACACGTTAATTGGGGTTAGTTTTGGGTGGGAGGGGAATTGGGGGGAAATTAGGTTTTATTTGAAAGATAGGGTTGTTTTCCTCCCACCCTACCGTTTCTGGTGACTAGGTACTGACTTCAAATAGAAGAGAAGGCTTAGAAACACTCCTGAtagtgaatgaaaacaaagcgGAAACAGACTCTTGCCTGTGAAACACTGAAGGCACCTGGAAGAGGAGAGGAAACAATCGAGGGACTTGACGTATTCTGAGTTCTGACTGGGGTCTCTTAATGGatttggcttttttttaaaagccgtgtatgttttcttgtttttctttttcattctttgtcGTTTATAACCTGACAGATTCTACGAAATAAGCTAGCTTGAACTTTActttttgtttagtgtttttttttttccatacttTTAGATACCTTTTGTTTATGATCTCTAATTAACCAAATAGAAATTTTAAGTGTTTGAAAATGAATCTGTCGGTCTGTTCATTAGAGTTTGTAGAAAGAATCTCTGGCTGTAGTTTGTGTTTccctcttatttttttaaacttgaagtttaaaaccatttggttttagttttttatttgtgaaacagTGCTCCCTTAAGATTAAAGAAGTACAGTGGGTAAAATAGTATACTACTTTTGAAATGGAgggcaaaagaaaacaaaacaaaaaaaactttccaaatCAGCCAAACAGTGACTACATCTGCTATGGATTTCCCAAGGAGCAAAAGGTCATGACTAATTGGGACTGTTTtgggatgcattttaaatgctatTACAGTATTACTTTCATAATATGGTGCTGATTTGAATATCCAGGTAATTAAAAGCAAGCTGGAGAACGTCttgagtgatttattttattttttcttattttctcttaaggttcaatttgaatatttaaatgtaaaatttggGAGTATCCATCCATTAAAGTGCATTGGGAAAGCCAGGCTCTTCCCCTgagttttacaaaaacaaaaatgaataatcatAAAGCCGTGCACTATGACCTTATGTTGTGTTGCTGTCACACAGCCAAAAATCTTGCCATAAACAGGCCTGTTGAGAACCATTTAACAACACCGGTATATTGCCTccagtgtattcaggattttgcACTAAAAGTTCATGTggacccttttttttttttttttctttccttttttaatctgATTGGTCTacttaatattaaacaaatggcAAGTTTCAGTATTCATCCATTTATTCGGATAACGGATGGCTGGCATCAAACAGTCACATGAAATCTAGCAATATTAAACTCCCTAGCAGTGTAATGAAGTGTAAGCCCTTggttatatctatatataatattttagatttattttagaaaaagcCTCTCTGAAGGAATGGTTATTTGGTTCCCAAGGTAACTTGACAGTCTCAAGTCGATCTTCAGTTTATGTAGCCCCTGACTGTGGCGATTCATTGATCAGTGCTTcagatatacatttgtttagtttaaagcACAGGTTAAATGGTTACACAATTTGCACACTGCTCCAAACCCCTgctttaaaacttttaaaccacaccacatttgtttttgcttttttcccccattttcatttgtttataagATCAAATGCAAGTGTCGTTGTTGTTTTACTGCAAATGTATGGTGATTTCTGTTGTACTATTGGTGATATTGTTTCTTAGTCTCTCAGGCTACATAGAAACTCTTCTTTTCCCCTTCTGAGATAATAGGTTGGTGGGAAGTACGTTGAGTAGTTTAGCGAAGATCTGAACTTCTATAAAGTGCAATTAAACACTAGAGGGAGCACTGTTGGAATCCAGTATGAACTTGATGGATATGTGCACAATCCTTATGTACTTatgctgatttttattttttattttacattttttgttctgtttatcaGTCTGTCAGTTAGACACAGGATTTCTACGGTGTATACGGCTCGCAGGAATGATGTGTTTTGATTCAGACTGGTGCTCTAAGTTTTGTATggtactttaaaaataaaaatggaaaatctgGTTCGGAGatgaggtttttattttggtggttTTTCAATTTTCTATTTCTGTGGGAGAAAAGTGAAGTGGGCATTTGGACCTTTTCTATTCCACACACTTTTGGtttcatgtaaatgtaaagttcAAGAAACGTGATGCATAATACACAAAGATATATCAAAGTTTACCAGTTTGCTTTACAGAGTggtataactattattatttaaactttcaCAACAACAAGGATTAAAAGAGAACTGGTAGTTcaactgagatttttttttttgtttaatctgttaCCCAATTTATTGaagttttaatgaaaaataacatggTGGCTCCCTCTAGCGGTACAAATCGAATAGTGCTT

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0007165 signal transduction biological_process
GO:0005942 phosphatidylinositol 3-kinase complex cellular_component
GO:0035014 phosphatidylinositol 3-kinase regulator activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K02649 PIK3R1_2_3; phosphoinositide-3-kinase regulatory subunit alpha/beta/delta

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006086 True 9736 mRNA 0.41 15 15789347 15818856

Neighbor

gene id symbol gene type direction distance location
AMCG00006085 NA coding downstream 5346 15778207 ~ 15784001 (-)
AMCG00006075 NA coding downstream 12839 15773678 ~ 15776508 (-)
AMCG00006069 pgpep1,LOC103360783,LOC104958139 coding downstream 214660 15565462 ~ 15574687 (-)
AMCG00006067 upf1,LOC105907049 coding downstream 229998 15544838 ~ 15559349 (-)
AMCG00006068 NA coding downstream 260023 15496753 ~ 15529324 (-)
AMCG00006087 NA coding upstream 22056 15840912 ~ 15877424 (-)
AMCG00006116 comp coding upstream 182697 16001553 ~ 16012344 (-)
AMCG00006114 LOC107578059 coding upstream 205619 16024475 ~ 16031177 (-)
AMCG00006115 NA coding upstream 254507 16073363 ~ 16075726 (-)
AMCG00006108 NA coding upstream 336450 16155306 ~ 16180536 (-)
G156113 NA non-coding downstream 173560 15615562 ~ 15615787 (-)
G156104 NA non-coding downstream 204581 15581857 ~ 15584766 (-)
G156049 NA non-coding downstream 357417 15427308 ~ 15431930 (-)
G156048 NA non-coding downstream 365497 15417978 ~ 15423850 (-)
G156028 NA non-coding downstream 421706 15366104 ~ 15367641 (-)
G156203 NA non-coding upstream 128352 15947208 ~ 15947527 (-)
G156207 NA non-coding upstream 175931 15994787 ~ 16000039 (-)
G156225 NA non-coding upstream 243877 16062733 ~ 16063072 (-)
G156228 NA non-coding upstream 247813 16066669 ~ 16071528 (-)
G156344 NA non-coding upstream 855942 16674798 ~ 16676047 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other downstream 297705 15433432 ~ 15491642 (-)
AMCG00006102 slc5a5 other downstream 781368 14998500 ~ 15007979 (-)
AMCG00006043 NA other downstream 1005067 14782506 ~ 14784280 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other downstream 1106367 14679797 ~ 14682980 (-)
G155770 LOC103376870 other downstream 1279733 14509233 ~ 14509614 (-)
G156206 klhl26,LOC107680559,LOC107597147 other upstream 135220 15954076 ~ 15957090 (-)
AMCG00006083 NA other upstream 635428 16454284 ~ 16462165 (-)
AMCG00006118 NA other upstream 686508 16505364 ~ 16521689 (-)
G156341 NA other upstream 832684 16651540 ~ 16680772 (-)
AMCG00006127 NA other upstream 1129141 16947997 ~ 16963650 (-)

Expression


Co-expression Network