AMCG00006087


Basic Information

Item Value
gene id AMCG00006087
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 15840912 ~ 15877424 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006087
CCGTAGTAACAACAGCCCCTGGAGTCGCGGTGCGGAGAAGATGCTGCGTTAGTGCGGCGGAGGAGTCCCAGATGTGTGCGTTTCATGGATGTCAGCCGGACGTTGAGTGCGGGAGGAAACACGAGAGGGTGGCATCTTGTTAGGATGGACGCGTGTGCCGCAGTGTGAGGGCGAGACCCTGGCACACGCTGTGTACACAGCTACACAATAGAGCCGCGGCGATGGAGTCGGCGCCCGGGGTTTGTGCACGGCGTGGACGGACAACCTGTTCGTCCAAACGCGCTCCCGGCACGATCTAAATACGGGGGGGAGGCCTctggatttacattttttggagGATTTTCCCGGTGCCGCATTTCTGTTCAGCTCCCATTATGTCTGACCCGAGTTACTGGACCGCCCTGCCGAGTTACAAATCGCATTTTGTGACGGGGGCGATGCTCAAGCGCTCCAAAAGttgCCGTAGCAGCAACAGGAAGAGCCTCGTTGTCGGGACCCCCTCGCCCACGCTGTCCcgtcctctctcccccctctctgtccccaCAGCTGGCAGTAGTCCTTTAGACAGCCCAAGAAATGTGTCCACCAGTGCCTCGCTCAACTTCCCCTTTGCTCGCAGagctgatGGTCGAAGATGGTCTCTGGCATCTCTCCCATCTTCTGGCTATGGAACCAACACCCCCAGCTCCACTGTTTCTtcttCATCCTCTTCCCAGGAACGCTTGCACCAGCTCCCCTACCAGCCCACGCAGGATGAGCTGCACTTCCTATTCAAACACTTCCGCAGCTCGGAGAGCGTGGCGGACGAGGATGGGCGGCCCTCGTCCTCGGGGCGACCCAGATCCCGCAGCCTAAGCCCTGGCCGGACAAGTGGTTCCTTCGATAATGAGATTGTTATGATGAATCATGTTTACAAGGAGCGGTTTCCCAAGGCCACAGCTCAGATGGAGGATCGTCTATTGGAGATCATCACCCAGTGTTCCCCGGACAGCAGTCTTCCCCTGGCCGATGGCGTCTTGGGCTTCATCCAACACCAGCTGGTGGAGCTAGCCCGCGACTGCCTGGACAAGTCCCAGAACGGCCTGGTCACCTCACGCTACTTCATGGAGCTGCAGGAGAAACTGGAGAAGCTTCTACATGAGGCCTTTGAGCGCTCTGAGAGTGAGGAGGTCCCCCTCATCACCCAGCTGGTGAAGAAGATTCTCATTATCATCTCCCGGCCTGCGCGACTACTGGAGTGCCTGGAGTTTGACCCCGAGGAGTTTTACCACCTGCTGGAGGCAGCAGAGGGTCACGCCAAGGTGGGCCAGGGCATCAAGACGGACATCCCTCAAATGGTGCAGCTTGAACACTACGACTCAGGACACACGATCACACCGGAGACGGACGATGCCACAGAACACAATCGGACCACCTCAACCCCTTCTCGAAGGAAGCCCCACGAGAGTGACTTTGAAACCATCAAGCTCATCAGTAATGGGGCATACGGTTTGTTGATTACATCCATGGGACACATCAAGCTGACTGATTTTGGGCTCTCCAAGATCGGTCTGATGAACATGACGACTAACCTGTATGAGGGCCACATTGAGAAGGACACCAGGGAGTTTGTGGACAAACAGGTGTGTGGGACGCCCGAGTACATCGCCCCAGAGGTGATTCTGCGCCAGGGCTACGGCAAGCCGGTGGACTGGTGGGCAATGGGGGTGATCCTTTACGAGTTCCTGATCGGCTGTGTGCCCTTTTTTGGAGACACACCAGAGGAGCTCTTTGGACAGGTTGTCAGCGACGAGATCATCTGGCCAGAGGGAGACGACGCCCTGCCTGCCGACGCCCAGGATCTGATCACGCGACTACTGAGACAGAGCGCCCTGGAACGACTGGGCACAGGCGGAACCAATGAGGTGAAGCAGCACCCTTTCTTCCACGGCCTAGACTGGAATGGCCTTTTGAGGCAGAAGGCAGAGTTCATCCCTCAGCTAGAGGCTGAGGACGATACCAGCTACTTCGACACTCGCTCAGAACGGTACCACCACCTCGCCTCAGACGACGATGACGATGAGACCAACGATGACGAGTCTTCTCTGGAGATCCGCCAGTTCTCTTCCTGGTCCCATCGCTTCAGCAAGGTCTACAGCAGCACTGAGCATCTGGCCACCCCCTCCAACCTCAGCTTCTCCTCCTCAGAGCGCAGCCACAgcgaggagaaggaggagcgcTGGGAGGGCCGGGCTGCCCCCTTTCCAAGTGAGGGACGCAGGGGGGCATGCGGTAGTGACCGGAAACCAGCTGGACACAGGGGAAGCCTGAGGCCCAGGGCTTCGTCCAGTTCCTCCCAGCCTGAGCGCAGTGCCAGCCCCCTGGTGATGAGCAGCACCCACAGCCTGGAGACCATGCCCCGCTTTGCCATCTCCACAGAGGATGAGGCAGAGGTGGTGGTCTCCAATCTCCACCGCATCCGTCTGCGCAGTAACAGCACGGGCACCAAGCACTCCACCCCAAGGGACACCGGCATGCCCCGCCGCTTCGGGCACCAGCTGGAGACACCTGAAAAGCCCCGAGTGCCGCCGGGCAAGGTCCCCAAATCCGCCTCTGTGTCAGCCCTGTCTCTCATCATCACCACAGATGATGGAGTGGGCGGCCCTCTGGCGAGCCCCATCTCTCCCCGCTCGCTCTCCTCCAACCCTTCCTCCCGAGACTCCTCCCCCAGCCGAGACCTCTCCCTCAGCATCAGTAGTCTGCGACCGCCCATCATCATCCACAGCTCGGGGAAGAAGTACGGCTTCACCCTGCGCGCTATCCGGGTCTATATGGGCGACAGCGATGTCTACACAGTGCATCACGTTGTCTGGAACGTGGAGGAGAGCAGTCCGGCCCACGAAGCAGGCCTGAGGGCTGGAGACCTCATCACCCATGTGAATGGCGAGTCTGTCCAAGGGCTGGTCCACACAGAGGTGGTTGAACTTCTGCTGAAGAGTGGGAATAAGGTGGCTCTGCAGACCACGGCACTGGAGAACACATCAATAAAGATTGGGCCGGCCAGGAAAACGAGCTACAAGGGCAAGATGGCGCGGCGCAGCAAGAAGAGTAGGAAGAGGGAGGGCCAAGACAGTCGGCGCCGCACCATCTTGAAGAAACTGTCCAAGCAGTCGACCGTGATGCACGCCAGCCGCAGCTTCTCCTCGGGCCTGCACCACTCGGTCTCTTCCAGCGAGAGCATGCCGGGGTCACCCACCCACAGTCTCTCCCCCGGCCCCTCCACGCCCTGCCGCAGCCCGGCCCCCGACCTGCCCTCTGATGCCAACTCTCCCCAGAGCACTTCACCTTGTTCCAGCTCGCCCAGCTCCCCTGCCACACACATCCGGCCCAGCTCCCTGCACGGTCTGGCCCCCAAGCTGAGCAGCCAGCGCTACACCAAGGTGGGACGCCGCAAGTCCACCAGCAGCATCCCCCCGTCCCCGCTGGCCTGCAACCCTTTGCCGCAGCCCCCTTCGCCCCAGCGCTCACCCTCACCCCTGCCTGGCATCGCCAAGACCCTACACTCCTTCCACGGCAAGACCCTCTCGCCGCCCACCATTGTGCGGCACACGGTGAGGCCCCGCAGCGCCGAGCCACCCCGCTCCCCTCTGCTGAAGAGGGTCCAGTCGGCGGAGAAGCTGTCGGGGGGGTACCACGGGGACAAGAAGTGCAGCTACACCCCTCGGAGGCACACCCTGGAGGTGCCCCACAGCGAGGGTGAGCCCCTGGGGGACTCGGAGAGCGAGGGCAACTTCGTCTACCTGGGTGAGCATGGGCGGCTGGGGTACTCGGGCGGCCAGCGCCTGCGGGACTGGGTAGGCGAGCGGCCGGAGGAGGTGGTGGTGATGAGGAAACTGAACCTGTCAGAGCGCCGGGACTCCTTCAAGAAGCAGGAGGCGGTACAGGAGGTCAGCTTCGACGAACCCGATACGGGGCCCTCCGAAGCCAAGGAGAAACCAGGCCCAGGCCCCTCTTTGGCAGTGTGTAGCCGCCCCCAGTTCAAGGCCTCATGGATTGAGGAGCCGGAGCGGAGCGAAGATCTGCCGGGGAGGAGGTCTAACCTCGTGCCCCAAATCGCCGTGCTGGGCTCCGAGAGCGAGGAGCAGGACGAGCGCTCGGACGACTGGGAGGGCCAgtcagaagaggaggaggaggaggaggagcaggaagaGGAGGCAGGCGGCCGACTGGGCAGAGGGGCAGGGGCACGGAAGCTACTGGCAGAGAGCTCTGACGACGCGGTTGAAAGCCAAATGGAGAAGCCACCGACCAGCGGGGGCATCCAGTGGGTGACTACGAGCAAGACGGAGGACAAAGACGAGAGCACACTGGTCTCGGCGCGGCGGAGAGGCAAAATGAAGGATTAAAGCCATTTCGGTCCTTCAGAATATCAGCCATATCTCCCAGGATGCTTTGCTGCAATTCCTGAATAACAGAAGAAGGATCAACCCCCCAAGGAAGCAGAGAAAATCCTTCACCAAAAGAACGTTTTGTACTGAACAGAAAGTGTTccttaagttttgtttttgcttttgttggttttatttaaaacatttttagtcCCCTAAAGGAATACTTTGTAGCCTTagccttttattttgtaaatacttaacaagacaaaaagaagagaagaacaagaagaagatAAAGACTGGTGAAGCGAAGActgtttttccaaatgtatttattatttttgtaagctACAAGGATTTGTAACCGGGCCAAAACCAATGTTAGTCACGTGGCGTTTTAACCAAACACGTGTTTTATTAAGCAACactgtcttttcttttaagcAGTATTTTATATCcaacaaggaaagaaaaataaacctccTCCGATTTGCTTTTCTATACAGATATTTTTTAACCCGGAGTAAATCGAATAGTTGACGTGTCACGGTACTAAAAATACTAAAGCTGCCATTGCTGTTTGTACTTTTCTATGGACTGTTAAGTAGCATACAGGAAACTATTTTTGAGCGGAATACCTTGACAGTATAACTTTCTGGAAAGCTTAGTTTTTATCATGGGATACTTCGTACTGGGGGAAGGGGAGATATGTTTTAGTCTAATGTGTAAAGCCTGTGCTATATGCCCACTCGCacttaaaaaggaaatgtataatttataggAGGTAGAATCCTTTTGTGGAAGGTGTAACGAGGCAATACactttctctctttattttcccCATGTTATAATCACATGGGAAAGTTAACGAAGCCTCCTACAACATTCTGTCATAGGTCAATTAGAGACGAGGTGACGAGAATTGTGGGGCATCATTTTGAGATGAGATCACACCCTCCCGGCTACCTAACACAGTTTTTCTACTTTTGTACTCTACGACATGCTTGGCTTGAGATATTACTGGAATAGGACTGGGCACAGCACAAGTGTCCAGCACTCTTGGGCATCTCAGAGTTGGATGTGACCATACACCACTTAGCACGCCTGTGGAGTATTTCTCAATAGCTAGCTAGCAACCGAAACCAGGAAATTGTTACTCAGGCCAAAAATGAACCTTTTGATCGCATAGTttccttgtgtttgttttagaataGATCTTAAACCCATGTATAGATCTATAGATTCCCCGCTTAAACGTTCTGGGCATGGCTCACAAGGCACGGGGTGAAATTCCATCGAATTGGTAGTTTAAATCCCATCTCTCGGACCTCACGCAGCCATCAGTAGTATATTTTTAACTAGCTCTCATCAGAAACATTACACCTAATCTGAATCGGAATCCATGTCATTAAAAAGAATACGCCAAACTTGCTCCATGATCAAGCCACATGAATTGGAGCTGGAGGCCTTGTATTGGATTACTTtgtctgatttttcttttaactcaAGGTTCGTGAATCTTACACCACTGACTTAATCCAGAACCTCTGAATCTGTCTGGACCTGTAGTGACAATGATGTGCCTCGTATTCTGCACAAGTGGGATTCGATTATTTCTTTCTCCCGTAAACTGCTTGCTGACGGGGTTTGAAGCAGACTGTATGTGTCGGCACCCAAAAGGGCTCCTATTTTACTGATggccttgttttctttttaatttttttaaaacatttcggGGGGGAAACTGCACTAAATTCTCCTTTCTTGCCACATGACTTGGTGTAGGAGACGTTTAGCAAAATCCACACAGATGTTACTTCAATTTTGCTTTGAATCACAATCCCCAGTTTGCACTGTTCCTGGTGGGCAGCAGGGGTATGCATTGTAATGGGAACGGCCCATTCTTGTACATTGAAAATGCTTCAATTGAATCCTTTTGCTAACCGCAGCTGTAAAATTATACGAACGCATGCAAATATAAGCTTGCACTGGAATCTCAAGCTGAAGCATGATGTTATACTAGCCAATAAGAGTCTGGTATTGCTGTTGAGGGGGGTGGAGTTGAGGTATATCTGCCAAGATTGACAGATGAGGTTTCATATACCAAGTTTGTGCAAAAGACTGTTGCCTTATAATATacaaagtttagttttttcatagTATTACTTTGTTTCATGAATACAAACGCCAGAATACAGGGAATACTTTGCTTTTACTCCCaaattaattgaactaatttaatCCTGTGCATAGACCACCACATTGTCAAAGTTGCCCCAAATGCAACCACTTGGCAAGCATGtttttcacttcctgtttgtgtaGCTGACTGGCCTTTGTGATTGGTTCCTTTTGCCGACATCCTGTCCTTGGTAACCATCTAGCGCCTTTTCCATGTGATATGAGTTTTCCGAGGTCCTCATATCCCTTTCCTCTGTTTTTCTATcattccccccctttttttgtACTACTACTTCTATGATATGGATTGATGTTTACATTTGAGAAATGCACACACTTACATGGGACGTTAACgttgctaaaaaaaacaaaaacaaaaaaatgagttacaaaaaaaaaaaaaaaaagtaaaaaaaaaaaa

Function

GO: NA

KEGG:

id description
K08789 MAST; microtubule-associated serine/threonine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006087 True 6973 mRNA 0.53 24 15840912 15877424

Neighbor

gene id symbol gene type direction distance location
AMCG00006086 NA coding downstream 22056 15789347 ~ 15818856 (-)
AMCG00006085 NA coding downstream 56911 15778207 ~ 15784001 (-)
AMCG00006075 NA coding downstream 64404 15773678 ~ 15776508 (-)
AMCG00006069 pgpep1,LOC103360783,LOC104958139 coding downstream 266225 15565462 ~ 15574687 (-)
AMCG00006067 upf1,LOC105907049 coding downstream 281563 15544838 ~ 15559349 (-)
AMCG00006116 comp coding upstream 124129 16001553 ~ 16012344 (-)
AMCG00006114 LOC107578059 coding upstream 147051 16024475 ~ 16031177 (-)
AMCG00006115 NA coding upstream 195939 16073363 ~ 16075726 (-)
AMCG00006108 NA coding upstream 277882 16155306 ~ 16180536 (-)
AMCG00006109 LOC104962492 coding upstream 313206 16190630 ~ 16208678 (-)
G156113 NA non-coding downstream 225125 15615562 ~ 15615787 (-)
G156104 NA non-coding downstream 256146 15581857 ~ 15584766 (-)
G156049 NA non-coding downstream 408982 15427308 ~ 15431930 (-)
G156048 NA non-coding downstream 417062 15417978 ~ 15423850 (-)
G156028 NA non-coding downstream 473271 15366104 ~ 15367641 (-)
G156203 NA non-coding upstream 69784 15947208 ~ 15947527 (-)
G156207 NA non-coding upstream 117363 15994787 ~ 16000039 (-)
G156225 NA non-coding upstream 185309 16062733 ~ 16063072 (-)
G156228 NA non-coding upstream 189245 16066669 ~ 16071528 (-)
G156344 NA non-coding upstream 797374 16674798 ~ 16676047 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other downstream 349270 15433432 ~ 15491642 (-)
AMCG00006102 slc5a5 other downstream 832933 14998500 ~ 15007979 (-)
AMCG00006043 NA other downstream 1056632 14782506 ~ 14784280 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other downstream 1157932 14679797 ~ 14682980 (-)
G155770 LOC103376870 other downstream 1331298 14509233 ~ 14509614 (-)
G156206 klhl26,LOC107680559,LOC107597147 other upstream 76652 15954076 ~ 15957090 (-)
AMCG00006083 NA other upstream 576860 16454284 ~ 16462165 (-)
AMCG00006118 NA other upstream 627940 16505364 ~ 16521689 (-)
G156341 NA other upstream 774116 16651540 ~ 16680772 (-)
AMCG00006127 NA other upstream 1070573 16947997 ~ 16963650 (-)

Expression


Co-expression Network