AMCG00006093


Basic Information

Item Value
gene id AMCG00006093
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 15092017 ~ 15096837 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006093
ATGCCCTGTGTGCAATATAAATTGTATTCCAAACTGACCTATGACAAGGTCACATTTGATGGCCTGCACATCACAGTGAGCGATTTAAAGCGCCAGATCATTAGTCGTGAGAATCTCATGTCAAAGCCTTCTGACCTGCAGATCACAAATGCTGAAACTGAAGAGGGGATCATTCCAAACCTTCAAGTGGACCTTCAGAAACATTACGTGAAGAATCCCTATGGAATACCCCCACCCAACTACACGTGCTTCCACTGCGGGAAGAAGGGACACtacattaaaaactgcacaaCCAAAGGGGCGCATGCCACTGGGAAGAGGGAGAAGTGTCCATCATCTAAGGAGGGGGACCCAGTGCCGGCTGAGCTGCTGTGTCAGCTCTGCAAGAACCTGATGGTGGATGCCGTGGTCATCCCGTGCTGCGGGAACATGTACTGCGACGCCTGTATTAGAAAACATCTCCTGTTCTCGGACCAGCACGTGTGTCCTACGCTCCACCCACCTGCATACAGGCAGCAGGTCCCCCTGATGGCCAGCAGTGCCGCCTCTCAGGTCAACCAAGCCAGCAGTGGGGCCGTCCCAGTGGCCCTTGGGAACTCCATTCCCACAACAGGTGAGATCTTGTGCCGTGACTGGAATGTTCTGGACCATTGCAGTCGGGAAGCTGGCTCATCCTACAGGGGAAGGTCCTTCACTAAATCCCAGTCCAGATCGTGCTCCCCGACCCGCTGTCCGGCCCAGGGATGCAACCTCAACAACCGGTCCAGATCGCGCTCCCATGGCCGCCACAACAACCAGTCCAGACCATGCTCCCATGGCCGCCGCAGGGACCGGTCCAGATCACGCTCCCATGGCCGCCGCAGGGACCGGTCCAGATCACGCTCCCATGGCCGCCGCAGGGACCGGGCCAGTTTGCGCTCCGATGGCCGCCACAGGGACCGGTCCAGATCGCGCTCCCATGGCCTCCGCAGGGACCGGTCCAGACTGTGCTCGGATGGCGACCACCAGTCTCGCACTGGATGTCCCACTTACAGGGAGGAGAAAAGTGGCGGAGGATACCGGTCCCGCTCCAGATCCCCTGGGGGTTACAGGAGTCACACCACCAGCAAGAAGCCAGCTTCAATCTCCAAGTCTGAAGAAGGCCGAAAATACATGGGTCAATACAGAGAACCTCCTGCCTCTGATGCCAAGACTTTTTACGGCCGTCCTGTGGACCAGAGAGGCGCTTTCAGGAGGGATCGGTACAAGCAGGGGGAGAGGGAGTACCACGAGCGCAATGACAAAAACTGTAAGAATCAGAACAACCCTCCAGGCAACCTACCCAGAGTGCGTGCCCCCAGACACAACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006093 True 1350 mRNA 0.57 6 15092017 15096837

Neighbor

gene id symbol gene type direction distance location
AMCG00006030 NA coding upstream 50090 15018786 ~ 15041927 (+)
AMCG00006031 NA coding upstream 100659 14990894 ~ 14991358 (+)
AMCG00006040 nr2f6,LOC108238456,LOC103359430,LOC101171737 coding upstream 243879 14838689 ~ 14848138 (+)
AMCG00006041 NA coding upstream 264490 14819668 ~ 14827527 (+)
AMCG00006042 NA coding upstream 293162 14796612 ~ 14798855 (+)
AMCG00006091 NA coding downstream 52101 15148938 ~ 15156505 (+)
AMCG00006090 NA coding downstream 85127 15181964 ~ 15185213 (+)
AMCG00006070 LOC107661085,LOC108271288 coding downstream 91387 15188224 ~ 15196741 (+)
AMCG00006071 cnn2,LOC107688471,LOC107585101,LOC107550622,LOC107709904,LOC107680261 coding downstream 108017 15204854 ~ 15215919 (+)
AMCG00006072 NA coding downstream 133128 15229965 ~ 15271081 (+)
G155913 NA non-coding upstream 36060 15050855 ~ 15055957 (+)
G155898 NA non-coding upstream 110397 14981101 ~ 14981620 (+)
G155897 NA non-coding upstream 111527 14979305 ~ 14980490 (+)
G155856 NA non-coding upstream 225538 14865914 ~ 14866479 (+)
G155832 NA non-coding upstream 330289 14760397 ~ 14761728 (+)
G155929 NA non-coding downstream 3483 15100320 ~ 15103379 (+)
G155931 NA non-coding downstream 8758 15105595 ~ 15106403 (+)
G155933 NA non-coding downstream 11157 15107994 ~ 15109196 (+)
G155934 NA non-coding downstream 12756 15109593 ~ 15111175 (+)
G155974 NA non-coding downstream 89037 15185874 ~ 15187225 (+)
AMCG00006034 vmac,LOC106573562 other upstream 432520 14652199 ~ 14659497 (+)
AMCG00006022 NA other upstream 667271 14420382 ~ 14424746 (+)
AMCG00006009 tax1bp3,LOC106573550,LOC107685157,LOC106613700 other upstream 708437 14375995 ~ 14383580 (+)
G155638 NA other upstream 982147 14108173 ~ 14109870 (+)
G155637 eps15l1,LOC107592720 other upstream 993321 14097804 ~ 14098696 (+)
AMCG00006092 rps28 other downstream 6619 15103456 ~ 15105567 (+)
G155932 NA other downstream 10372 15107209 ~ 15107734 (+)
AMCG00006065 lsm4,LOC106613629 other downstream 481247 15578084 ~ 15584761 (+)
AMCG00006107 LOC107709901,LOC107680255 other downstream 867596 15964433 ~ 15988775 (+)
AMCG00006111 smim7,LOC106573893 other downstream 936055 16032892 ~ 16035969 (+)

Expression


Co-expression Network