AMCG00006094


Basic Information

Item Value
gene id AMCG00006094
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 15098331 ~ 15103532 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006094
TACTCAAAATCTAACGcggtcttttttatttttaattattttattgtgtgttataTGCGGGAAATACTTCCACAGGCAACGGTTCTGCCCAAATATcagcaatatattaaataactgtgtagtgtgtgtgtctaatccCATCGTGCATTGCATCCACTTCCGCATCCCTGTGGGAaagactttaatttaaattaaattataacttTTCGGGTTAAGATAATTAAGAATTGGTGATCACATACATTGTGTAAGCAGAAGTCTGAAGAGAAAacgttaaataaaataaataaataaaagtgccAGGTTTTCTCATGGTACCCGGAGGGTCTGCCCTTGACAACAACAATGGCGTCCGCAACCAAGATTATACGAAGAATTAGGAACTTCTTTTCGGGGCACGATCTCCAAGCTAAGCTTCAACTTCGTTACACTGAGATCGCTAAAAGGACTCAGCCCCCACCTAATCTCCCAGTAGGGCCCAGCCACaagtttgcttttaattattactgCCTACGAGATGGGCGACGGGAAGCGGCCCCTCCAACGATTGTGATGTCGTCCCAGAAAGCACTGGCACCTGGCAGTGAAGTTCCAGCTGTACCTGCCAAGCTTCCAGTGGTGCCCGGACCTCCAGCGAGGGACCTGCAGCTGTCTACAGACCAGCCATACctctgagagagagggtgaggggggGTGTAATAGTCCTGCTGGTTTATGACAGTAAACCACTGCCGTTCACATCTCCACCTGCACTAGGTGCTCACTGctgctgtaattaaaaagaGCCACAGCCTAAACTTTAGGGCCCAGTCCCTTGTCTGTATTGTTCTGtataaagtaaaacatgaatccagtaaattaataaaaagtattatatatGTCATGGAATATgtggttatttttaaatctctgtcTTTTAGTAATTGAAAATCAGTATTTTCTTCAGTGGTGATTTGATTATTGtacagcagtggttcccaataCTGCTTCTGGAGGACCCCCgaccctgctgttttttcttccaaccaagctcttaattacttgTTGTATGTGTAATGTCTCATTTAACTATATTGTAAGTATATTATAcagtttggtgtgtgtgtgtgtgtgtgtattgctgCGAATCCTAACACATGTGCTATTTTATTACATGCAAGTATCAGACTAAATTTAGACTGATGAAAAATGGCTAAAAGAAGCACCTGTGTTTCAGTTCTGCACACCCCCATAAAACCCTCCAACTGGGTTTTATTGCAGTGAGCACCGGGGCTGGAGGAGAAGTTTGTCTGGGAGTGGTGAACTAGGAGgattgtttaaaataagaaatcattGATCTTCCAGGACCTGTCTGTTGCTACAGACTGTCCCTTAAACACAATTCAAAAGAGTGAATGATTGTATTACCACAACAGTATAGAATCGGggatttaaaaatttaaaaaggcatgaaaaaaatgtttcagaagaACTAATACATCAAAAGAAATTGCTGGTGTGTTCAACACttgcatacaaaaacaaacaaaaaatgtttgtgcagTTTCACATGTTCTCCACATGGTGTCATGCTTAAATCACCCTAAAAAGAGGTCTTGTAAAATCTGTGCACAAAGCAATGGTTTATATATGTTCTGTATGAAATGCTTGTAAAGAtaattttgcattacatttagaaaaacaaatatatttgaaacattGCTCATGTGCAGATCTGtattacacatattttacagatccaaattataattatacagagACAAAACCTGTTTTATACTGAACACATCACCGGTTTATGTATTAGCTTGCTTATTCCATTCCTCGTAACTGGTTCAAATCCACTCGATGTGTTTGTCGACTTCAGGTTTAAAGTATAAAGCTGACTTTGTGGAAGTTATTTCTGAGATCACGAAACAACCTTGTAGAGAATTTACCGGTACAATAATGACAAAGAACTGGAGCTGTGAAGGGGAGTCTTCTGTTGAAACCAGGCTTTTTCAGACAACAgccttttttggttgttgttctgAACTCCCCCACCGAAGACAAAAACTGAACTATGTTGGAGGCTAAATGTGTGAAGGGAAGAACATTGTTCTGGACTGTGCTGGAAGAGCTCACAGCACTCACACTATGATTCGTACATGGTCAGATTCACACAACCAGTGTATATTTACTTGGTGGGGGAGAGTTGCTTCtcaacaattcaaaatatgcCTCTGGACCTTGCTGTATCTCTAAACTGCTCTGGGGGATCAGCGTGAAAGGGCTCTGTCCACCCACTGTATTGCTGAACTTCATCCAAGTGTGGAAATGTGCTCCTGGAAATTGAGTGCTTGTATGCTTCTTAGTAGGTGCTGATTAGATATACAGTACAGGGGTGTAACTTTCCTTTCAAAAGTCATTTCAgtcaagggggtggggggaagctGGGTAATTTATAAGCACTTTTCAACAATCCATTGGCCGACCTGGGCCACATAGTAGAGTTGCACTCTTTTTGTTCAACTGATGGTTTTCAATACTGTCTTGCTAAACCAGGGGTGTGAAAGTCAGTGCTTTGGGGGGGGCTTCAGTCTCGTCTGGTTTTCTTTCCAATTGCAGTACTCAGTTGCTATATAGTGTGATTTCTGCTTAggcaatttttttaattgtcacaatatcaacatttctttattcatgtcttgattttgttttccccctaCAATATCTGCGATACGATATTTAAATTAGTTCACAATGGTACAAACATGTAATCCTATTGGACAATGAATCAACATTTTTGTATACAAATACAGGTCTATAATAGGGCATAATGTGCATAAAGTTACtataaagtaatattaaaataactttaataaacCTG

Function

GO:

id name namespace
GO:0042773 ATP synthesis coupled electron transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0008137 NADH dehydrogenase (ubiquinone) activity molecular_function

KEGG:

id description
K03951 NDUFA7; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006094 True 2866 mRNA 0.39 4 15098331 15103532

Neighbor

gene id symbol gene type direction distance location
AMCG00006100 NA coding downstream 9423 15080401 ~ 15088908 (-)
AMCG00006098 NA coding downstream 20563 15074200 ~ 15077768 (-)
AMCG00006097 NA coding downstream 37570 15050921 ~ 15060761 (-)
AMCG00006095 NA coding downstream 53840 15042183 ~ 15044491 (-)
AMCG00006103 NA coding downstream 66528 15030987 ~ 15031803 (-)
AMCG00006099 kank3 coding upstream 800 15104332 ~ 15123328 (-)
AMCG00006101 LOC106573875 coding upstream 57789 15161321 ~ 15181317 (-)
AMCG00006080 NA coding upstream 274690 15378222 ~ 15390581 (-)
AMCG00006081 gamt,LOC107747770,LOC107597217,LOC107685360,LOC107553529,LOC107757934 coding upstream 293720 15397252 ~ 15400964 (-)
AMCG00006079 arrdc2,LOC106573914 coding upstream 365709 15469241 ~ 15480318 (-)
G155899 NA non-coding downstream 116710 14980384 ~ 14981621 (-)
G155783 NA non-coding downstream 528495 14569562 ~ 14569836 (-)
G155768 NA non-coding downstream 606402 14489290 ~ 14491929 (-)
G155754 NA non-coding downstream 673585 14422504 ~ 14424746 (-)
G155717 NA non-coding downstream 728149 14369761 ~ 14370182 (-)
G155989 LOC105900582,LOC107680261,LOC107709904,LOC107550622,LOC107688471,LOC107585101 non-coding upstream 75519 15179051 ~ 15217634 (-)
G156002 NA non-coding upstream 101337 15204869 ~ 15212286 (-)
G156003 NA non-coding upstream 103988 15207520 ~ 15318177 (-)
G156014 NA non-coding upstream 169281 15272813 ~ 15330546 (-)
G156028 NA non-coding upstream 262572 15366104 ~ 15367641 (-)
AMCG00006102 slc5a5 other downstream 90352 14998500 ~ 15007979 (-)
AMCG00006043 NA other downstream 314051 14782506 ~ 14784280 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other downstream 415351 14679797 ~ 14682980 (-)
G155770 LOC103376870 other downstream 588717 14509233 ~ 14509614 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other downstream 756728 14336891 ~ 14341603 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other upstream 329900 15433432 ~ 15491642 (-)
G156206 klhl26,LOC107680559,LOC107597147 other upstream 850544 15954076 ~ 15957090 (-)
AMCG00006083 NA other upstream 1350752 16454284 ~ 16462165 (-)
AMCG00006118 NA other upstream 1401832 16505364 ~ 16521689 (-)
G156341 NA other upstream 1548008 16651540 ~ 16680772 (-)

Expression


Co-expression Network