AMCG00006095


Basic Information

Item Value
gene id AMCG00006095
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 15042183 ~ 15044491 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006095
GCTAAACCCTAGACAGTTCTCAAACAGGTTCACTTGTGGAGATCGCTCTCTGTCACTGCACGGAAACTGTAGGATGCCTCGGCTGTTTGCACCTCTTCTCTTTCTGCTCGTGGTTTGGCACAGCAGGGCTCATGCCCAGGACAATCGGGTGAAGCTGTGTGGTCGTGAGTTCATCCGAATGGTGGTGAGGTCTTGTGGGAGCTCAAGACTCAAGCGGCACACACAGGAACTTGAGCAGCCGCAGGTCAGCCATCACAGGGAGCTGCTGGAATGGTTGAAAAGTGACACATTCAACTACCAGGAAGGTCCAGACCCGAGCAGGGAGCCCCAGGATTGgagggaggaagaagagaggaATGACATGGGTTACACTCCTCCTGTACAGCTCGCCAGTACCCCATCACCCATTCCAGACCAGAGCAAGGCCGCCGAGGGATCCAGTGTCTCAGCATGGACCCTCCAGCCAGGCTCTTCTCGCCTCCGACGTGATTCAGGTCCAGCGGGGGGGTGCTGCAGGTCGGGGTGCACCATGAGTGAACTGGTGCAATACTGTTGAGCCCTATACCCCTCATTTCTCACCTCCACCTTCCCCGTCAAAACCCCCGAGCTGCACGTGCTTTAGAAATTGCCTGATTGCTGATTTTAGGGCcctacaacaaaaaacaaaccaaccaaaaaaataaaacaaacaattgtgcCAACGATCAGTTATTTTCTAATCTCAATGGATTCAAAGTGTTGTGCCTGACTAGGTCAATAAATACAGAGGCTTTTATGCTCAAAGAACTGCATATAAGTCAAAAGTGATCCAGTATCTAGTGATTTCTATTAACATTTCTGTTGGTGTTGCAGTAGCCTATGCCTGATGACAGTCTTCCAAAGGGATTTCTTTAATTGTGTGGTTGTGAAGTTGCACTAGTTAATCATGGTAGGAAGTAGGCTACTCTAGGCTAAACATGTCTGTATTTGCCCTTAACTTCTCAAAAGATTCTCTAATAGTAAGAAACAGCATAATACACATGGCACTTTTGACAGTGGCTTACTAGTCCATTCTATTCAGTCCCTGAGTTAGGTTGCTGTCGCATTTTACTTTCCAATCACAAGAATGGCAAGGTCTGGAATTAGATTCAAAAAGCCCGCTGATTTACACCCAACATAGCTTGaaacaaattgtattatatagaaaatgaacacaaatgtaAGCCTACACTTGAACATGTGACACAATTAAGTATGTTAAGCCTCCCCCTTGTATTTATCAAGTGCATACAGTTAAGACacctatttattagttttttatcCAGACCCTTTTTGTTATACTTACTACTTCCTTTTCACCTGTCTTTCACTCAATAGTCAATACACCTAAGTCATTGTACAAACAATTGCCTCAACCgatattgcattttttactCAATTTTACAGCAGGATACAGATATAAATCTTAGGGGTTAATTGTCTTTATGTAAGGTGTTGTTCCTTTGTTTGAAACGCATGCCTTTCGTGCAGTGTTCAAATGAAGACAATCTTAAAACGCAACAACATTGTTGTTGGCTGACTTTTgaaaagtgcaagaatacaaaaaataaatgttttctatgAAGTGAATAAAGATCTAGATCTATCCAAgtttcctttccctttttattctctctttctttctttctttctttctttctctctctctgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006095 True 1689 mRNA 0.43 2 15042183 15044491

Neighbor

gene id symbol gene type direction distance location
AMCG00006103 NA coding downstream 10380 15030987 ~ 15031803 (-)
AMCG00006096 NA coding downstream 49922 14981801 ~ 14992261 (-)
AMCG00006033 LOC107589798,LOC107718068,LOC107722564,LOC107585128 coding downstream 110798 14920403 ~ 14931385 (-)
AMCG00006032 NA coding downstream 135025 14889140 ~ 14907158 (-)
AMCG00006044 NA coding downstream 166462 14866709 ~ 14875721 (-)
AMCG00006097 NA coding upstream 6430 15050921 ~ 15060761 (-)
AMCG00006098 NA coding upstream 29709 15074200 ~ 15077768 (-)
AMCG00006100 NA coding upstream 35910 15080401 ~ 15088908 (-)
AMCG00006094 NA coding upstream 53840 15098331 ~ 15103532 (-)
AMCG00006099 kank3 coding upstream 59841 15104332 ~ 15123328 (-)
G155899 NA non-coding downstream 60562 14980384 ~ 14981621 (-)
G155783 NA non-coding downstream 472347 14569562 ~ 14569836 (-)
G155768 NA non-coding downstream 550254 14489290 ~ 14491929 (-)
G155754 NA non-coding downstream 617437 14422504 ~ 14424746 (-)
G155717 NA non-coding downstream 672001 14369761 ~ 14370182 (-)
G155957 NA non-coding upstream 55818 15100309 ~ 15105533 (-)
G155989 LOC105900582,LOC107680261,LOC107709904,LOC107550622,LOC107688471,LOC107585101 non-coding upstream 134560 15179051 ~ 15217634 (-)
G156002 NA non-coding upstream 160378 15204869 ~ 15212286 (-)
G156003 NA non-coding upstream 163029 15207520 ~ 15318177 (-)
G156014 NA non-coding upstream 228322 15272813 ~ 15330546 (-)
AMCG00006102 slc5a5 other downstream 34204 14998500 ~ 15007979 (-)
AMCG00006043 NA other downstream 257903 14782506 ~ 14784280 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other downstream 359203 14679797 ~ 14682980 (-)
G155770 LOC103376870 other downstream 532569 14509233 ~ 14509614 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other downstream 700580 14336891 ~ 14341603 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other upstream 388941 15433432 ~ 15491642 (-)
G156206 klhl26,LOC107680559,LOC107597147 other upstream 909585 15954076 ~ 15957090 (-)
AMCG00006083 NA other upstream 1409793 16454284 ~ 16462165 (-)
AMCG00006118 NA other upstream 1460873 16505364 ~ 16521689 (-)
G156341 NA other upstream 1607049 16651540 ~ 16680772 (-)

Expression


Co-expression Network