AMCG00006098


Basic Information

Item Value
gene id AMCG00006098
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 15074200 ~ 15077768 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006098
GATCGACACCCTGGCTGCCACTAAGAGAAGCGCAATGAAGAAACTGAAGAAGAGGCGCTCTAGCCTCTTCCCCAACCTGAAGTTTGGTGACAGCTTCAACTACTCCCAGAGCACCGATGATGATGACAACAGCTTCCCCTTCTCCATGGACAGCTCCGTCAAGCAGTGGACGTCCATGCACAACCTGGATAGCCCTCTGGACTCGGGAGGGGAGGGCTGTGGGGAAAAGTGCAGGGGCCATGGGCCGTACTGGTCTTCCCCGGGGAAGATGCACATGATCAGCCTCAATGTCGGGGGCAAGGTGTTCCATATCGCGAAGCACGTGGCCATCCGTTTCCCCCACACCCGCATCGGGAAGCTGGCTCTCTGCACGGACCCGGTCAAGAAGATGGAGCTCTGCGATGACTATTCGGTTCTCACCAATGAGTACTTCTTCGACCGGGACCCCACCTTCTTCCACTACATCTTCCACTACTACCGCAGCAAGGTGGTGTGGGTGATGCAGGAGCTGTGCCCAATCAACTTTGAGGAGGAGATGGACTACTGGGGCCTGCGGATGAGGGACACGCAACGCTGCTGCCGCATCCTCTTTGAAGAGAAAGTGGACGAGCTGAAGGAGTACCTGAAGGTGCAGCGGGAGCTGATGGCCGAGATCGAGCCCGAGCACAAGGAGGAGCACTTTGAGGGCATGTTCTTCTGGAGGTTCCGCAAGGCCTTGTGGGATCTGATGGAGAACCCCTACTCCTCGGTGTCAGCCAAAACGTTTGCTGTCCTCTCCAGCATCTTCGTGGTGATCTCCATCGGGGCCATGACTCTCAACACAGTGGACGACCTGAAGTACTGCAAAATCAAGGGCAAGACCTACATGGAGTGCGTGGAGATGTTCAGTATTGTCTTTTTCACCTTGGAGTACTTCCTGCGCCTCCTGACTACCTGTAACATCAAGCGCTTCCTGCGCAGCGCCCTGAACTTCGTGGACCTGGTGGCCGTCATGCCCTATTTCATCCAGATTGTGTTCGAGGCGTTCGTTGACAACACCGACCTCAGCTACCAGGATGACCTGCAGGCCATGGAGCGGGTCAGCAAGATCAGCAAGGTGCTCAAGGTCATCCGCCTGATGCGCATCTTCCGCATCCTCAAGCTGGCCCGCCACTCCACGGGCCTCCGGGCGTTCGGCTTCACCATCCGCCAGTGCTACCAGCAGGTCTGCTGCCTCTTCCTCTTCATTGGCATGGGCATCTTCACCTTCTCCGCACTCATGCACTCGGTCGAGCACGATGTCCCAGGGACCCCCTTCAGCAGCATCCCCGGGGCTTGGTGGTGGGCTGCGGTGAGCATCTCCACAGTTGGCTACGGTGACACAGTGCCGGAATCCTTCCTGGGCCGGCTGGTGGCATTTGGCTGCATCTCTTTCGGCATCATCCTGAACGGCATGCCCATCTCCATCCTCTTCAACAAGTTCTCCGACTACTATGCCAAGCTGAAGGACCAGGAGTCCACCAACAACATGAAGCAGCGGGGACGCATCCAGCTCCACGTCCGTGTGCGCCGCAAACTGGAAGAGTGCATGAAACCCCAGACCCTGGACTCAGAGGAGGAGGACTCCCTCTACCGCCATGGTGCCCACTCTGAGGCCCACCCCCACCAGTGCCACCAC

Function

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0051260 protein homooligomerization biological_process
GO:0008076 voltage-gated potassium channel complex cellular_component
GO:0005251 delayed rectifier potassium channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006098 True 1657 mRNA 0.58 2 15074200 15077768

Neighbor

gene id symbol gene type direction distance location
AMCG00006097 NA coding downstream 13439 15050921 ~ 15060761 (-)
AMCG00006095 NA coding downstream 29709 15042183 ~ 15044491 (-)
AMCG00006103 NA coding downstream 42397 15030987 ~ 15031803 (-)
AMCG00006096 NA coding downstream 81939 14981801 ~ 14992261 (-)
AMCG00006033 LOC107589798,LOC107718068,LOC107722564,LOC107585128 coding downstream 142815 14920403 ~ 14931385 (-)
AMCG00006100 NA coding upstream 2633 15080401 ~ 15088908 (-)
AMCG00006094 NA coding upstream 20563 15098331 ~ 15103532 (-)
AMCG00006099 kank3 coding upstream 26564 15104332 ~ 15123328 (-)
AMCG00006101 LOC106573875 coding upstream 83553 15161321 ~ 15181317 (-)
AMCG00006080 NA coding upstream 300454 15378222 ~ 15390581 (-)
G155899 NA non-coding downstream 92579 14980384 ~ 14981621 (-)
G155783 NA non-coding downstream 504364 14569562 ~ 14569836 (-)
G155768 NA non-coding downstream 582271 14489290 ~ 14491929 (-)
G155754 NA non-coding downstream 649454 14422504 ~ 14424746 (-)
G155717 NA non-coding downstream 704018 14369761 ~ 14370182 (-)
G155957 NA non-coding upstream 22541 15100309 ~ 15105533 (-)
G155989 LOC105900582,LOC107680261,LOC107709904,LOC107550622,LOC107688471,LOC107585101 non-coding upstream 101283 15179051 ~ 15217634 (-)
G156002 NA non-coding upstream 127101 15204869 ~ 15212286 (-)
G156003 NA non-coding upstream 129752 15207520 ~ 15318177 (-)
G156014 NA non-coding upstream 195045 15272813 ~ 15330546 (-)
AMCG00006102 slc5a5 other downstream 66221 14998500 ~ 15007979 (-)
AMCG00006043 NA other downstream 289920 14782506 ~ 14784280 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other downstream 391220 14679797 ~ 14682980 (-)
G155770 LOC103376870 other downstream 564586 14509233 ~ 14509614 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other downstream 732597 14336891 ~ 14341603 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other upstream 355664 15433432 ~ 15491642 (-)
G156206 klhl26,LOC107680559,LOC107597147 other upstream 876308 15954076 ~ 15957090 (-)
AMCG00006083 NA other upstream 1376516 16454284 ~ 16462165 (-)
AMCG00006118 NA other upstream 1427596 16505364 ~ 16521689 (-)
G156341 NA other upstream 1573772 16651540 ~ 16680772 (-)

Expression


Co-expression Network