AMCG00006099 (kank3)


Basic Information

Item Value
gene id AMCG00006099
gene name kank3
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 15104332 ~ 15123328 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006099
CCCAGATTCTCTCTGACGTGTGGCTCGAGGGGAGAACAGGGCTGGCACCAAAATAGAACTAAACTTATCATCTCGGAGAGTTGATTGCACTCGCGCTACGTGGAGACTCGCAGGGGACGAAAGCTGCCGGGAAAGGGGGAAGGCAGAGCCGAGGGAAAGGTTAGGGGATGTTGTGACCTGCCGTTCCGAGCCAGAAGAGCAGGAGCAAGACCAGTCAAGAGAAGAGCCTCGAACAGCATTTTGTGCAGCTGGGCGGCAGGGGAAGAAGGCTGTAGGGTCCCTCGTTAAGGTGTGTGAGGGAGATCTGGGGGCTCCTTTCCTCTACGGCACCCAGGAGCAGACGGAGCAGGGGGGCTCCTATTCCGTCCAGACACCCTATGGGTTCCAGCTGGATCTGGACTTTCTCAAGTATGTGGAAGAAATCGAGAGTGGCCACAACTTTCGTCGGGTGCCCGTTAACCCTCGGCGGGGTACACGGAGCACCAagtcctcctctctctctcagaggagCCCGGGGGCCGGTGGGCATACCAGCGGCTGGACCTCCACAGAGTCCCTGTCCTCCTCAGCCAGCGAGGAGGGCCGGGCACCTCCCTTGCCACCGCCCAGAATCCGCACCACCTCGGCCCCCTCAGAagcactccctctctctcctgtcccaTTTACCAGCCCCCCACTCTCTGCCGGTCCTAGAGTACCACCCCCCCCTCCAGTCCGTAACCACAGAGTGGAGAGGACCTTACTGGAGACCAGTCGCCGGCTACAACAGGAACAGACGCAGCTGCATAATGTCTCTGGCTTCAAACTTGCAGACCCTCCCAGACCTGGTGCCAAAGAATTAGGGAGGCCAGCTGCTACCCCAACCATTCCTTCTCAATTGTCCATTCTTACAGGCACTTCTGGTGACCTCCATGCACCCCCTTCATCCTCTGCTTCCCTCAGCCCGTCCCAGGGCAACTGGACCAGAGCGAGTCCACTCAATTCTGGCAGAAGCACCCCAGCTTCAGGAGGCCTCTCTGCCACTGGCCTAGCACAGATCCCACCCACCCAGCTCCAGACGGTGCGTGAGCAGATGGCGGCCGCTCTGAAGCAACTCAAGGAGATGGAGGAACAGGTCAAGGGTGTGCCAGCGCTGGAGAGAGAAGTGACCAAGCTGCGCGCCGAGAAGGATAGGCTGCTGATGGCTCTGCGAGAGAAGACTGGAGGGGGACCAGGAGTCCAGCAGAGGTCCTTGAGCACAGGGAATGGTGctgaggaggagggggaaggggaggcCCAGGCTAGGCCTCCGCCATCGCCCAGCCACATCAGGCCCAGCAAGCTGGCAGAGCTGAGGAAGTTGACGGAGAAGCTGGGAGGCAAAGAGGAGAAGGAAGGTGAGCAGGCAGAGAGAACAAAAGTGAGGGATAAAACGGATGTGGAGAGAAGGTCTGTGGCAGTAGGGGAAGATAGGTTGCTTGAGGAGGGCGTGTTTTACTACCGGGGGGGAACGAAGGAGGCCTCGGTGAGCACTGAGGCTGTGGCAGCTTCAGAGAAAGGAGTGGGAACAGATACAAAGGAAATGCGTGAAGCTGGGGTGGAGGCCAAAATGGAGACTGAAGATGCCTCAGTGTGGGTGATGGAGTCCTTGCTTGGGCTGAGGAGCGAGGCTGAGAAGGAGATTGAAACCTTGCAAGATACCATAAAATTCCAGCAGGAAGCCATACAGGTGCTGGAGGGCCGTCTCTCCCAAGCAGATCAGGAACTGAAAGTGCTGAGAGACCAGGAGGAtcagaggaagaagaggagcaCAGCAGAGAAGGGCGTCCATGTTAGACCAGACACTGCCAGCGTCCAGGTGGAAGCCGTGGTCTCTCAAACCAGCACCGCCGTGGGGGCCAAACTGGAAGAGTCAAAGGAAGTGTGCAGTGTTGCGGTGCAATGTCAGTGCGAGGTGGAGGATGCAGGCGTTGGGCAGGAGTTGGCGCCACAGAAAGACCAGAACACTCAAACTGAGCCGAGAAGCAGACCAGTCACCAGCACTGGGAGCCAATGGGAGAATCCAGAAAGAGAAGCACAGAAAGTTGCTGACCACAAATCTCCTGTGCCCGTTCTGAAGAGGAGGCAGGTGACCATCACAGAGCACACTGTCACTTCTAGCCTAGGTGCGGTCAGTGTGATGACGGAGAGAAGGAAGGCCAAGGAAGAGGAGACTATTCCCTTCAGCCCAGCTACAGGTGTGCTGAAGTCCATTATGAAGAGGAAGGATGGGAGTGCCCAGGGACaagccagcagcagcagcaagaagaGCCTGCAGTTTGTGGGGATTCTCAATGGGGGGTATGAGTCGACGTcgagtgaggaggaggaagaggagggagacgGAGAGGAGGGGAGCTCGTCGGGGGGCAGCGGGGTGGGCGGCAGCTCCGACAGCAgcgagggagaggagggggcgCTGGTTGACACCTCGGAGGACGAGAGGAATGTCAACCTGGATGACAGCGACAGTGATGTGGAGGGGACGGGggcagagaacaaacaaaagcagcagaGTGCGGTGAAAGAAAAGTTTGAGCTGAGTATGAAAATGCGGGAGGCGTGCCTCATTCTGAAGAACCACCTTAACGATGATGTCAATGCTCTGAAGAGCAAAGAAGTGCTCTCGAGCACTCACACGGTCCAGCAGGAGTGGTTCCGTGTGTCCAGCGCCAAGACGGCCGTCCCGTCCCGCGTGGCTGACTACCTTATGGCATTCTCGGAGGTGTCCCCGGCCCTGCCGCGCCACGTGGTGAACATGACGGATGGAAACGGCAACACCGCCCTGCACTACAGCGTCTCACACTCCAACTTCGCTGTGGTGGGACTCCTGCTGGACACGGGCGTGTGCAGTGTTGACCACCAGAACAAGGCAGGGTACACGGCCATCATGCTAGCTGCTCTGGCTGCAgtgaagagagaggaggacatGAGGGTGGTGAGGAAGCTCTTCAGTCTGGGCAACGTCAATGCTAAGGCCAGCCAGGCGGGGCAGACGGCCCTGATGTTGGCAGTCAGTCACGGACGGCAGGACATGGTTCAAGCCCTGCTGGACTGCGGCGCCAGCGTCAACATCCAGGACGACGAGGGCTCCACCGCGCTGATGTGCGCCAGTGAACACGGGCGCGCCGAGATCGTCAAACTGCTTCTGGAGCAGCCTGGCTGTGACATCTCCATTGTGGACAACGATGGCAGCAATGCTCTCTCTATAGCCCTTGAGGCCTCTCATAATGACATTGCTGTACTCCTCTACGCCCACATGAACTACTCGAAGTCTGCAGCAGCTGGAACACCCAAGATAACCACAAGAAGCCCCTCGTCCCCATCTAAATCCTGGCCAGCTGAATAACTACTGACTCTCTCAAGACCGCCCCCGCCCCACCCTGCACCCTCACAGGAGCAGACACAACTGGACACTGGGTGCTGCAGCACTGAGCACCTCCCTGCATCCTACTGACAGACAGCCTACATACTcttgtattaaatatgtatttataaaatggtATTAGTAATACATGTATCCATGTTAAATATCTGATACATTACGCTTTTCCATCAATATTCAAGAATAATTGTTTACCCAATGTTAATCTTCCCatcctttttatttgtgtgtccCAGAAATCTTAAACACCACACAGACCAAGCATAGTTTTAGATTGAGCAAGAATGGTTCCTAGTTTACAACTGATTTTCAAATGTGTGAAAGGCAGTAAAGAACAGCTCCTTTGCATGCCTTTACCAAAGTTCAGACCAAGTGCTTATTTCTATACAATATTTCCAGTAttagtggaaaaacaaataccccCCTCCTTCCagaaacaattatatttctGCACTAATACCTGTTTATGCACTGTATAttggtttcatttgttttatgattaaaatactttatttacttaGGGATGTTTATTTCCTTCAGAATTTGAGGTGTGAAACCCAGCAACATGCCTATTTTTGGTATATACAATACgtgcagatgcccttatccagggcaacggagaacaaactttacattttactcattaatacagctgggttttttactggagtaatctaggtaCAGTAACTTTCTCAGAAGTACAACAGTGCCCCCCCTCCCTGCACTTGAACACACAACCATCTGCTCCCTCTCTATAATTGACTGAACATATATAAAGCTTCATGGAAATCcaaatacatattcagaaataaacaatgacaATTAATTGCCAATCCAACCTTTATTGTCAAACTGTACACATCGTGCTTTTAACACTGCTTTACAAAAATCAGTGTCCATACTCCACAACAGTGGTCTTCAATGTGGGCGTGTCTTCCATCTTCACAAGGGACTGTAACCAGCGCAGCCTCCTTGCTTCTCTTTCGGACTCCAGCAGGGTGAGCACATCGCCCTCTCTGACTGGGCCCTTCACGTTGCGGATGATGGATCGGTTGCTGTCGTCCATGAACTCGACACGCACCTGCGTACACTGTCCCTGGGAACCGGTC

Function

symbol description
kank3 Predicted to be involved in negative regulation of actin filament polymerization. Predicted to be active in cytoplasm and cytoskeleton. Is expressed in several structures, including dorsal fin fold; fin bud; gut; neural tube; and vasculature. Orthologous to human KANK3 (KN motif and ankyrin repeat domains 3).

NR:

description
PREDICTED: KN motif and ankyrin repeat domain-containing protein 3

GO: NA

KEGG:

id description
K22808 KANK; KN motif and ankyrin repeat domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006099 True 4512 mRNA 0.54 13 15104332 15123328

Neighbor

gene id symbol gene type direction distance location
AMCG00006094 NA coding downstream 800 15098331 ~ 15103532 (-)
AMCG00006100 NA coding downstream 15424 15080401 ~ 15088908 (-)
AMCG00006098 NA coding downstream 26564 15074200 ~ 15077768 (-)
AMCG00006097 NA coding downstream 43571 15050921 ~ 15060761 (-)
AMCG00006095 NA coding downstream 59841 15042183 ~ 15044491 (-)
AMCG00006101 LOC106573875 coding upstream 37993 15161321 ~ 15181317 (-)
AMCG00006080 NA coding upstream 254894 15378222 ~ 15390581 (-)
AMCG00006081 gamt,LOC107747770,LOC107597217,LOC107685360,LOC107553529,LOC107757934 coding upstream 273924 15397252 ~ 15400964 (-)
AMCG00006079 arrdc2,LOC106573914 coding upstream 345913 15469241 ~ 15480318 (-)
AMCG00006082 NA coding upstream 359834 15483162 ~ 15488681 (-)
G155899 NA non-coding downstream 122711 14980384 ~ 14981621 (-)
G155783 NA non-coding downstream 534496 14569562 ~ 14569836 (-)
G155768 NA non-coding downstream 612403 14489290 ~ 14491929 (-)
G155754 NA non-coding downstream 679586 14422504 ~ 14424746 (-)
G155717 NA non-coding downstream 734150 14369761 ~ 14370182 (-)
G155989 LOC105900582,LOC107680261,LOC107709904,LOC107550622,LOC107688471,LOC107585101 non-coding upstream 55723 15179051 ~ 15217634 (-)
G156002 NA non-coding upstream 81541 15204869 ~ 15212286 (-)
G156003 NA non-coding upstream 84192 15207520 ~ 15318177 (-)
G156014 NA non-coding upstream 149485 15272813 ~ 15330546 (-)
G156028 NA non-coding upstream 242776 15366104 ~ 15367641 (-)
AMCG00006102 slc5a5 other downstream 96353 14998500 ~ 15007979 (-)
AMCG00006043 NA other downstream 320052 14782506 ~ 14784280 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other downstream 421352 14679797 ~ 14682980 (-)
G155770 LOC103376870 other downstream 594718 14509233 ~ 14509614 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other downstream 762729 14336891 ~ 14341603 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other upstream 310104 15433432 ~ 15491642 (-)
G156206 klhl26,LOC107680559,LOC107597147 other upstream 830748 15954076 ~ 15957090 (-)
AMCG00006083 NA other upstream 1330956 16454284 ~ 16462165 (-)
AMCG00006118 NA other upstream 1382036 16505364 ~ 16521689 (-)
G156341 NA other upstream 1528212 16651540 ~ 16680772 (-)

Expression


Co-expression Network