AMCG00006101 (LOC106573875)


Basic Information

Item Value
gene id AMCG00006101
gene name LOC106573875
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 15161321 ~ 15181317 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006101
TGGTCGGGCTCTCCCTGCCTGTTTCCGTGATCGCTTTATTGACTCCTCCTGCCTCTATATTCCGGGCCATGGACGCAGCCGTAACCGTTcaaaattattacttttaaatatcGCTAGATCGGGGATCAGAGTCTGGTGGGAGAGGGAAGCGGAGGCTGGATCTgttgCCAAATCTGGTTGAGGCTTGTTGGCCGGTTAATGCATAGAGTAAAGAAGGTCAAACTTGAAGACGAAACCGAAGGCAGTTggaaaagTTGTGCAGCAGTCAGAATGACGGCGGTGGATGAACTCTCGGATAGCACAGAGGTGGTGGAGATGGAGGACGTTCCTTCTCAGTTTTTCGTGGAGAAGCACTCGTGGGACGGCCTGCGGGACATCATCCACAGCAGCCGGAAGTACTCGGGCATGATCGTCAACAAGGCCCCGCACGACTTccagtttgtgcagaaacaaGACGAATCTGGGCCCCACTCCCACCGGCTCTACTACCTCGGAATGCCCTATGGAAGCAGGGAAAATTCGCTGCTTTACTCCGAAATTCCCAAGAAGATTCGAAAAGAGGCCCTACTAGTACTCTCCTGGAAGCAGATGCTGGATCATTTTCAGGCAACGCCTCACCATGGTGTGTACTCTCGGGAGGAGGAGCTCCTACGTGAGAGGAAGAGGTTGGGTGTCTTCGGCATCACTTCCTATGACTATCACGCCCAGAGTGGACTCTTCCTGTTCCAGGCCAGCAACAGCCTCTTCTACTGCCGTGACGGGGGCCACAATGGCTTCATCGTCTCCCCCATGAAGCCAGTGGAGATCAAGACGCAGTGCTCAGGGACTCGGATGGACCCCAAGATCTCTCCAGGTGACCCCAGCTTCATCGCCTTCATTAACAACAACGACTTGTGGGTGGCCAACATCGAGACGGGAGAGGAGAAACGGCTGACCTTCTGTCACAAAGGCTTGAACAATGTGAAGGACGACCCTAAGTCTGCAGGCGTGGCCACCTTTGTGATCCAGGAAGAGTTTGATCGCTTTACGGGGTACTGGTGGTCCCCGGCTGCTCCAGAAGTGGACGAGTCTGAGGTGGAAATCATTCATGTCCCCTCTCCTGCACTGGAGGAACGCAAGGCCGATGCATACAGATACCCCCGGACAGGGAGCAAAAACCCCAAAATCACCCTCAAGCTTGCCGAGATCAAGACTGACCATCTGGACAGGATCGTGAGCACGCAGGACAAGGAGCTGGTCCTGCCCTTCACCACCCTCTTTCCTGGGGTAGAGTACATTGCCCGCGCTGGCTGGACCAAAGACGGCAAATACGCCTGGGCGGTGTTCCTGGACCGCACTCAGCAGAGACTGCAGCTGGTGCTCCTGCCCACGGCCCTGTTCATCCCCGTGGTGGAGGACGAGGCCCAGCGGCAGGAGAGCGCGGAGGCCGTGCCCGAGAACGTCCACCCCTTCATCATCTACGAGGAGAACACTGACATCTGGATCAATGTCCATGATATCTTCTACCCCTTCCTCCAAACGAAGGATGACGAGATCAGTTTCATCTGGGTTAACGAATCCAAAACCGGATTCTGTCACCTATACAAAATCACATCAGTATTGCAACCAGGGTGCTACCAGTGGTCCCGGGACTACAGCCATACTGAAGGTGATTTTAAATGTCCAATTAAGGAGGAAGTAACGCTAACCAGTGGGGAGTGGGAGGTGTTGGCCAGACATGGGTCAAAGGGCACGAAGGATACCCCCCTGGAGCACCACCTGTACGTAGTCAGCTATGACTCTCCGGGGGACATCATCCGACTCACCAAGCCCGGCTTCTCCCACAGCTGCTCTATGAGTCAGAATTTCGACATGTTCGTCAGCCACTACAGTAATGTCAGCACCCCGCCGTGTGTACACGTGTACAAGCTGGTGGGCCCGGAGAGCGACCCCCTGCACAAGGACCCCGAGTTCTGGGCCAGTATGATGGAGGCCACAGGTTGTCCGTCAGATTACATCCCTCCTGAGATTTTCGACTTCCCTGGAAAATCTGGGTTCCAGCTGTACGGCATGGTGTACAAACCCCACAACCTACTGCCTGGAAGAAAGCACCCCACTATACTCTTCGTTTACGGGGGTCCCCAGGTCCAGCTGGTGAACAACTCCTTCAAAGGCGTGAAGTACCTGCGGCTCAACACTCTCGCCTCCCTGGGCTACGCGGTGGTGGTCATCGACGGGAGGGGCTCCTGTCAAAGGGGACTCAAATTCGAAGGCgcactcaaaaacaaaatgGGTCAAGTGGAGATCGAGGACCAGGTGGAAGGGCTCCAGTTTGTGGCCGAGAAATATAACTTTGTGGACTTGAGTCGTGTGGCCATCCATGGTTGGTCCTACGGTGGCTTCCTGTCGCTCATGGGCCTCATTCACAGACCTAACATCTTCAAGGTGGCCATTGCGGGCGCCCCCGTCACTGTCTGGATGGCGTACGACACGGGTTACACAGAGCGCTACATGGATGTACCTGAAAACAACCAGCAGGGATATGAGGCGGGGTCAGTGGCACTTCATGTGGACAAACTCCCCAATGAGCCCAACCGACTACTAATCTTACACGGATTCCTGGACGAGAATGTGCACTTTTTCCACACCAACTTCCTGGTGTCACAGCTAATCCGTGCTGGGAAGCCATATCAACTACAGATCTACCCCAACGAGCGACACAGCATCCGTTGCCCAGAGTCCGGAGAGCACTACGAGATTATGCTGCTGCACTTTCTACAGCAATACCTCTGAGAGCAGGCCTCTGTCAAGGTGcctcccccccagcccctcTTCCCGTGTTCCACTGACACGGCACACCACCGCCCCTACCCGCCCCGGCTGCCCATTCCCCACCCCCTGTGGTGAAGATAGTCtccacccccccagccccctcgCCTTCTTCTCTGTGTGGGGAAGCCGGCGAGAGTTTTTAACAATCTCCATGTGAGCAGAAGGCTCTGACCTCCTCtgagaaaagaaaggaagaacgaaaaagaaagcaagaaagagagagaaaagtctGCGAACTTCTCATTTAAATCAAGAACAAATACAGCAACCACAAGAAAACGCTGAATCCCGAACAGAAGCTATACCTTACTagtaacttatttttattttcttatttgttctTGTCGTGCCACATCCAATTccaaaatttagtttttatcattattcttattttttatgaaataaatCTTAACCCAGATGTTATGTtgccaaatgtttttattttaatttttccctctctcctatCAGTGGCTTAATGTAAGTACCCGTAATGTAATGAATCACAAGACCCCTCTTCCCTTACGtgcacgcacacaaacacacacccacgcaACCACGCAaactgacatttgttttgttttgaatgtttttgttaattcttttattttcccccccaTTGTTGTTctccagcatttattttatttttggttgttttttattttgaaaccttGCAGTAAAGGCATCAAGGACAACGTGGTTTCACCCCGCCAGGTCCGCTTTTAGGCCTTGAAAGTGCGCTGAGGGGGGCACGAAGCCATCCACTACTACCTGCACCCAGTATTTTAAGTGtgtattattaaaagaaaatatttttatgaattCTTATTCTTTTATAATGAGTGTAAAGTGTAGTAACTCATTAAAATATTGCAATCTC

Function

NR:

description
PREDICTED: dipeptidyl peptidase 9-like isoform X2

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0016020 membrane cellular_component
GO:0008236 serine-type peptidase activity molecular_function

KEGG:

id description
K08656 DPP9; dipeptidyl-peptidase 9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006101 True 3688 mRNA 0.51 21 15161321 15181317

Neighbor

gene id symbol gene type direction distance location
AMCG00006099 kank3 coding downstream 37993 15104332 ~ 15123328 (-)
AMCG00006094 NA coding downstream 57789 15098331 ~ 15103532 (-)
AMCG00006100 NA coding downstream 72413 15080401 ~ 15088908 (-)
AMCG00006098 NA coding downstream 83553 15074200 ~ 15077768 (-)
AMCG00006097 NA coding downstream 100560 15050921 ~ 15060761 (-)
AMCG00006080 NA coding upstream 196905 15378222 ~ 15390581 (-)
AMCG00006081 gamt,LOC107747770,LOC107597217,LOC107685360,LOC107553529,LOC107757934 coding upstream 215935 15397252 ~ 15400964 (-)
AMCG00006079 arrdc2,LOC106573914 coding upstream 287924 15469241 ~ 15480318 (-)
AMCG00006082 NA coding upstream 301845 15483162 ~ 15488681 (-)
AMCG00006068 NA coding upstream 315436 15496753 ~ 15529324 (-)
G155957 NA non-coding downstream 55788 15100309 ~ 15105533 (-)
G155899 NA non-coding downstream 179700 14980384 ~ 14981621 (-)
G155783 NA non-coding downstream 591485 14569562 ~ 14569836 (-)
G155768 NA non-coding downstream 669392 14489290 ~ 14491929 (-)
G155754 NA non-coding downstream 736575 14422504 ~ 14424746 (-)
G156002 NA non-coding upstream 23552 15204869 ~ 15212286 (-)
G156003 NA non-coding upstream 26203 15207520 ~ 15318177 (-)
G156014 NA non-coding upstream 91496 15272813 ~ 15330546 (-)
G156028 NA non-coding upstream 184787 15366104 ~ 15367641 (-)
G156048 NA non-coding upstream 236661 15417978 ~ 15423850 (-)
AMCG00006102 slc5a5 other downstream 153342 14998500 ~ 15007979 (-)
AMCG00006043 NA other downstream 377041 14782506 ~ 14784280 (-)
AMCG00006037 rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 other downstream 478341 14679797 ~ 14682980 (-)
G155770 LOC103376870 other downstream 651707 14509233 ~ 14509614 (-)
AMCG00006013 LOC105011475,LOC106613699,LOC106573549 other downstream 819718 14336891 ~ 14341603 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other upstream 252115 15433432 ~ 15491642 (-)
G156206 klhl26,LOC107680559,LOC107597147 other upstream 772759 15954076 ~ 15957090 (-)
AMCG00006083 NA other upstream 1272967 16454284 ~ 16462165 (-)
AMCG00006118 NA other upstream 1324047 16505364 ~ 16521689 (-)
G156341 NA other upstream 1470223 16651540 ~ 16680772 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_035982 dpp9 coding NC_007119.7 CM002892.2 47677208 ~ 47723544 (+)