Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00006115 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 16073363 ~ 16075726 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007165 | signal transduction | biological_process |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00006115 | True | 1248 | mRNA | 0.58 | 2 | 16073363 | 16075726 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00006114 | LOC107578059 | coding | downstream | 42186 | 16024475 ~ 16031177 (-) |
| AMCG00006116 | comp | coding | downstream | 61019 | 16001553 ~ 16012344 (-) |
| AMCG00006087 | NA | coding | downstream | 195939 | 15840912 ~ 15877424 (-) |
| AMCG00006086 | NA | coding | downstream | 254507 | 15789347 ~ 15818856 (-) |
| AMCG00006085 | NA | coding | downstream | 289362 | 15778207 ~ 15784001 (-) |
| AMCG00006108 | NA | coding | upstream | 79580 | 16155306 ~ 16180536 (-) |
| AMCG00006109 | LOC104962492 | coding | upstream | 114904 | 16190630 ~ 16208678 (-) |
| AMCG00006110 | LOC106574064,LOC106613575,LOC105011408 | coding | upstream | 201360 | 16277086 ~ 16287328 (-) |
| AMCG00006084 | ptbp1,LOC106613576 | coding | upstream | 388286 | 16464012 ~ 16487227 (-) |
| AMCG00006119 | NA | coding | upstream | 422926 | 16498652 ~ 16500578 (-) |
| G156228 | NA | non-coding | downstream | 1835 | 16066669 ~ 16071528 (-) |
| G156225 | NA | non-coding | downstream | 10291 | 16062733 ~ 16063072 (-) |
| G156207 | NA | non-coding | downstream | 73324 | 15994787 ~ 16000039 (-) |
| G156203 | NA | non-coding | downstream | 125836 | 15947208 ~ 15947527 (-) |
| G156113 | NA | non-coding | downstream | 457576 | 15615562 ~ 15615787 (-) |
| G156344 | NA | non-coding | upstream | 599072 | 16674798 ~ 16676047 (-) |
| G156378 | NA | non-coding | upstream | 789372 | 16865098 ~ 16922863 (-) |
| G156668 | NA | non-coding | upstream | 2056603 | 18132329 ~ 18137505 (-) |
| G156670 | NA | non-coding | upstream | 2062793 | 18138519 ~ 18144775 (-) |
| G156696 | NA | non-coding | upstream | 2357880 | 18433606 ~ 18434245 (-) |
| G156206 | klhl26,LOC107680559,LOC107597147 | other | downstream | 116273 | 15954076 ~ 15957090 (-) |
| G156088 | rps15,LOC107680474,LOC107685215,LOC107578086 | other | downstream | 581721 | 15433432 ~ 15491642 (-) |
| AMCG00006102 | slc5a5 | other | downstream | 1065384 | 14998500 ~ 15007979 (-) |
| AMCG00006043 | NA | other | downstream | 1289083 | 14782506 ~ 14784280 (-) |
| AMCG00006037 | rpl36,LOC106560598,LOC107678109,LOC107741803,LOC107744644,LOC107577535 | other | downstream | 1390383 | 14679797 ~ 14682980 (-) |
| AMCG00006083 | NA | other | upstream | 378558 | 16454284 ~ 16462165 (-) |
| AMCG00006118 | NA | other | upstream | 429638 | 16505364 ~ 16521689 (-) |
| G156341 | NA | other | upstream | 575814 | 16651540 ~ 16680772 (-) |
| AMCG00006127 | NA | other | upstream | 872271 | 16947997 ~ 16963650 (-) |
| G156907 | NA | other | upstream | 3199474 | 19275200 ~ 19293820 (-) |
