AMCG00006128


Basic Information

Item Value
gene id AMCG00006128
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 16922895 ~ 16941137 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006128
ATggggccgaggagcaggtgCAAAGGTAGTGGCGATACGGAAGTCAAGAAGGAGGGAAAGGTCAGGATTTCCGGAGGGCGGCCACAAGGCAAGGTCGGGAGGCCTGGGTGGTGGCTCCAGGAGGGGAGCGGGGTCCGGTACTGGTTCGCAGAGCATGAGAGGTATAAGTACTGGCTGGACGGCGGCTGGATCGGGACCGGGAttgggacctctggttcggcagcgtcggccgggatcgggaccgggacctctggttcaACAGCGGCGGCtgggatcgggacctctggttcggggGCGGCAACCGGGATCAGGACCTCTGGTTCAGCGGCGTcggccgggatcgggaccgggacctctggttcggcggcatcggccgggatcgggacctctgtTTCGGCGGCGGCCGCCGGGCATCAGGAttgggacctctggttcggcggcggaGGCCGGTATCGGGACCGGGAttgggacctctggttcggcggcggcggcggccgggatTGGGACCGGGAttgggacctctgCTCCTGCCATAGGGACAGTACGCAGATGGTCGCTGTACTGCTGACTCCTTCCCCTAGGGTGTCTGTCCGGGAAGGGCAGACAGTCACGCTGGACTGTGAACTGGAGCGAGAAGACAAGCAGACTTTAAGCTGGTACAAGCAGTTCCCGGCTGAGGGTCCACAGTTTATTCTCAATTTTCACCCCTGGAACAGCTCTGTAGCCTCCTACGGCGCTGGCTTCTTCTCCAGCAAATTCATTGTCACGCAGAAGGACTCCCTCCATCAGCAGTTAGTGATCAGGAATGTGTCCATGAGCGACACAGCACTGTTTCTGAATGGGCAGAAACCAACTGCGGGGAACATTATCTTCGGTGAAGGTATCCAGCTCATTGTGGAGGGGCCTTACCCCTCCAACCCATCAGTGGTCATCTTCCCTCCTTCCCCGGATGAGCTGCGTACATCAGGCACCGCCTCCCTGGTGTGCCTGGTCCGTGGCCTGTCCCTTAGCCTGGTGGACATCAGCTGGGGGGTTAATGGGAAGGCTGTGAACAGGGGGGTTAGCATCAGCCCGCCATCCAGAGACCAAGATGGCACCTTCAGCCAAGTCAGCCTGCTCAGCATCCCAATCACCAGCTGGAACAAGAATGACAACTACTCCTGTTCTGCCAAGCAAGGGAGCAGGATCTTCAAAGGCACCCTGCAAGCTTCCCGTTGTTGAAACCGACCTCCTGCAGTGTCAGACGGGAACCTCTCCTAACAAGAGGCAGCTTCACACTAAATTGAACCTGGCTGACTACATATTTTCTGAAGTGGTTACTCATTTAACAGATTCCCTGAGCTCACTGAAAAGTATCATCcattttataattacaaaaaaaatggtcAAATGATATCATCTGACCTACCAACAATTCATTATGAAACTTACATCAGTCTATTAAAATTGAGCTAATCAATATTTTCATAACAAGGGCCAGTGGTGAGTCCCGCACAACTGATTTTTCCTTTCAGCCGTTGTGGTTATGGCGTCAATCAAAATCATCCACTGTTAAATGGAATCACTTGTTTGTAATTAGAAAGTAGTGTTTGTCATTATTCTTCACATCACTTGTACTTGAGTGTCTTGATCAGAAATATAAGGTTTTGTACTGAAAAAAGCAGGCAATCTGAGTGAAAAGTGCTTGGCCTGGAGGTTAAGATGATGAAAGCAATGGATAACAGTTTAGAGTCTGATTTTCAGTGTGTGCTCTACAAGTGAGGTTAAATGGTATTTGTTCTAAGAGAATCTGTCACTATAAGATTTTTACCTGTTCTTCTAATATTCAACACTATTTTATGGCTGGCATAAGAGCAGTGCTGCCCTACAACACTACCCAGCTACATTTGTGGTTTAAGAACTAGTGACAAAATCACTGTTGTAAAATTATACATCTGTAGGTCATACTGCTATTTTTGCATTCCATAGATAACCTCCTAACAACTTGGGTTACAGTGAGCTTGAAGTCAATCTCACCCCAATATTAAGGTGTCTTTTCTCATTTCTCTCTTCTGTACCCTTTGACTGCTTAAAGATTGGGGCAACCTGTGCGGCAGTATCGTTTTCACAGACTCTCGATAAAACCAGCACCTTGTAAAGCAGAATCAGcgtgcaaaacattttttacaaataaagttGCTTGTTTTAAACAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006128 True 2194 mRNA 0.50 6 16922895 16941137

Neighbor

gene id symbol gene type direction distance location
AMCG00006126 wdr18,LOC106613619 coding downstream 17092 16903593 ~ 16905803 (-)
AMCG00006129 NA coding downstream 77963 16835879 ~ 16844932 (-)
AMCG00006145 NA coding downstream 173500 16722210 ~ 16749395 (-)
AMCG00006144 med16,LOC106613614 coding downstream 218970 16694712 ~ 16703925 (-)
AMCG00006147 NA coding downstream 241427 16660952 ~ 16681468 (-)
AMCG00006132 NA coding upstream 39408 16980545 ~ 17008274 (-)
AMCG00006131 NA coding upstream 81132 17022269 ~ 17022594 (-)
AMCG00006133 NA coding upstream 81891 17023028 ~ 17028378 (-)
AMCG00006153 NA coding upstream 95690 17036827 ~ 17051752 (-)
AMCG00006152 fzr1,fzr1a coding upstream 142827 17083964 ~ 17094648 (-)
G156378 NA non-coding downstream 32 16865098 ~ 16922863 (-)
G156344 NA non-coding downstream 246848 16674798 ~ 16676047 (-)
G156228 NA non-coding downstream 851367 16066669 ~ 16071528 (-)
G156225 NA non-coding downstream 859823 16062733 ~ 16063072 (-)
G156207 NA non-coding downstream 922856 15994787 ~ 16000039 (-)
G156668 NA non-coding upstream 1191192 18132329 ~ 18137505 (-)
G156670 NA non-coding upstream 1197382 18138519 ~ 18144775 (-)
G156696 NA non-coding upstream 1492469 18433606 ~ 18434245 (-)
G156716 NA non-coding upstream 1590925 18532062 ~ 18532447 (-)
G156717 NA non-coding upstream 1592046 18533183 ~ 18538243 (-)
G156341 NA other downstream 242123 16651540 ~ 16680772 (-)
AMCG00006118 NA other downstream 401206 16505364 ~ 16521689 (-)
AMCG00006083 NA other downstream 460730 16454284 ~ 16462165 (-)
G156206 klhl26,LOC107680559,LOC107597147 other downstream 965805 15954076 ~ 15957090 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other downstream 1431253 15433432 ~ 15491642 (-)
AMCG00006127 NA other upstream 6860 16947997 ~ 16963650 (-)
G156907 NA other upstream 2334063 19275200 ~ 19293820 (-)
AMCG00006201 LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 other upstream 2507794 19448931 ~ 19463205 (-)
G157059 NA other upstream 3768662 20709799 ~ 20712216 (-)

Expression


Co-expression Network