AMCG00006129


Basic Information

Item Value
gene id AMCG00006129
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 16835879 ~ 16844932 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006129
atgctgtcagGGCCAGTGACCAATGCTTTCATCATGGCCGCCCCTGCCAACATGTTTGTGCCGGACAGCCGCCCCGCCGTCCCCCTGCCCTCTTTCAGCCGCCACCTGAACCCCACCGACCATGGAGAAGGCCCTGAGCTTGGGGCCGTCTGTCTGCGCTTGGGACTCAACTCTCAGGGCTCTGAAGAATCCTACTTGGAAAAGGCTGGGAAGCTTTATTCCCTCATGTGCTCCGTTACAGACAAGAGCGTGTTTGGAGATGGCGAGAACAGCAAGGTGCGTGTGtctgagctggaggaggaggtcAAGACCCTGAAGAAGATCAACAAGGACCTGTACGAGTTCTCTTCACAGCTGCTTACCAAGCCCAATTGA

Function

GO:

id name namespace
GO:0070121 Kupffer's vesicle development biological_process
GO:0007368 determination of left/right symmetry biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006129 True 375 mRNA 0.57 4 16835879 16844932

Neighbor

gene id symbol gene type direction distance location
AMCG00006145 NA coding downstream 86484 16722210 ~ 16749395 (-)
AMCG00006144 med16,LOC106613614 coding downstream 131954 16694712 ~ 16703925 (-)
AMCG00006147 NA coding downstream 154411 16660952 ~ 16681468 (-)
AMCG00006146 NA coding downstream 174963 16648022 ~ 16660916 (-)
AMCG00006117 NA coding downstream 197913 16627973 ~ 16637966 (-)
AMCG00006126 wdr18,LOC106613619 coding upstream 58661 16903593 ~ 16905803 (-)
AMCG00006128 NA coding upstream 77963 16922895 ~ 16941137 (-)
AMCG00006132 NA coding upstream 135613 16980545 ~ 17008274 (-)
AMCG00006131 NA coding upstream 177337 17022269 ~ 17022594 (-)
AMCG00006133 NA coding upstream 178096 17023028 ~ 17028378 (-)
G156344 NA non-coding downstream 159832 16674798 ~ 16676047 (-)
G156228 NA non-coding downstream 764351 16066669 ~ 16071528 (-)
G156225 NA non-coding downstream 772807 16062733 ~ 16063072 (-)
G156207 NA non-coding downstream 835840 15994787 ~ 16000039 (-)
G156203 NA non-coding downstream 888352 15947208 ~ 15947527 (-)
G156378 NA non-coding upstream 20166 16865098 ~ 16922863 (-)
G156668 NA non-coding upstream 1287397 18132329 ~ 18137505 (-)
G156670 NA non-coding upstream 1293587 18138519 ~ 18144775 (-)
G156696 NA non-coding upstream 1588674 18433606 ~ 18434245 (-)
G156716 NA non-coding upstream 1687130 18532062 ~ 18532447 (-)
G156341 NA other downstream 155107 16651540 ~ 16680772 (-)
AMCG00006118 NA other downstream 314190 16505364 ~ 16521689 (-)
AMCG00006083 NA other downstream 373714 16454284 ~ 16462165 (-)
G156206 klhl26,LOC107680559,LOC107597147 other downstream 878789 15954076 ~ 15957090 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other downstream 1344237 15433432 ~ 15491642 (-)
AMCG00006127 NA other upstream 103065 16947997 ~ 16963650 (-)
G156907 NA other upstream 2430268 19275200 ~ 19293820 (-)
AMCG00006201 LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 other upstream 2603999 19448931 ~ 19463205 (-)
G157059 NA other upstream 3864867 20709799 ~ 20712216 (-)

Expression


Co-expression Network