AMCG00006133


Basic Information

Item Value
gene id AMCG00006133
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 17023028 ~ 17028378 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006133
atgaaagagaTTGTGGAGCTGGAAGGATGCCTCAAGGCACAGCTGGAGACattcttcaaaatGGAcctatttcaattaaaaattgcCAAGGAGCACTATGAGCAGTTAAGTATCAAGAAGGCGGCGCTGCAGGAGCCCATTCAGGCCCCAACAAACCATCGCTACAAGGCCGAGAAGGGGCTCAGACGAGCTGCGCTTTCCTATGGCTATCAGctGGATCAGCTGTTTGATATCACAGCAAAGGACACTGAGGTCATTAACAATACATACCCCAGCACCCAGAAGATAATGAAGGAGAGCATCTCTGAGCCAAACCAGGCCCAGCTCGCTGCCCCCGCTTCTGAAAGCGAGGCGCTACAGAACCCCCCAGCCGAGGAGACTGAGAAGAAACTGGATGCTGAGAACATTGACCAGAAATTCCAGTCTAGAGAAGCTCCCGGGTCTGGACGGCCCTCTACCGGCACCCTGAACCGATGCTCCGTTCTGCAGCAGTCATCCTCTGCCGCACCTTCCTCCGTAGACAGTGATGCACGGAGAGTCCCGCAGAGGAGTAGCTCCCACCGGGGGCGCAGTGAGCGTCGTTGCCGCTTCGAATGTCTGGAGCGGCGTGAATGTGGCCAGCGTGATCGCTTTGATAGGAGAAAAGCTGGAGATAAGAGAGGCCTTGTCAGGAGTGACCAGAACAGGCCCTCAGTCACCAAGAGGGGCTATAGTAAAGAGACGGAAGACCGCAGCCATGAGAGGCGCCACTGCGGCCCAGCAGACCCCCTGCCCAGAGTCGCCAGCATGACTGACCACAGAGACCAGGGCACTCGGGGGAAAGCTGGGAGTGAAGAGACAGTGAAACGGGAGGCAGTGTCCACCCCTCCTCCTGCCCCTGCCAAAGCCACCCTGAGCGAGGATGGCATGGACAAGAAGTCTAAGGCCATCATTGAGGAGTTTCTCCACATCAATGACATGAAGGAAGCCCTGCATTGTGTCCAGGAGTTGAACTTGGAGCCGCTGCTCTTTGTGTTTGTGCGCAACGGTATAGAGTCGTCATTGGAGCGCAGCAGCATTGAACGGGAATGCATGGGCCTGCTGCTCTACCAGCTGCTCAAGGCTGGTACCTTGCCCTCTGAGCAGTACAACAAAGGTGTGCTGCTGCGGCAGTCAAGTGGTGGTGAAGCGCATTTCCTGAAGGTCTCTGCTGTCATTGTGTCCAGGCTGCAGGAAATCCTGGAGGTGGCAGAAGACATGGCCATTGACATCCCTTACATCTGGCAGTACCTGGCAGAGATCATCGCACCCATGCTGCACGAGGGGGGCATTGCCATGGGCGAACTCTTCAAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006133 True 1335 mRNA 0.56 9 17023028 17028378

Neighbor

gene id symbol gene type direction distance location
AMCG00006131 NA coding downstream 434 17022269 ~ 17022594 (-)
AMCG00006132 NA coding downstream 14754 16980545 ~ 17008274 (-)
AMCG00006128 NA coding downstream 81891 16922895 ~ 16941137 (-)
AMCG00006126 wdr18,LOC106613619 coding downstream 117225 16903593 ~ 16905803 (-)
AMCG00006129 NA coding downstream 178096 16835879 ~ 16844932 (-)
AMCG00006153 NA coding upstream 8449 17036827 ~ 17051752 (-)
AMCG00006152 fzr1,fzr1a coding upstream 55586 17083964 ~ 17094648 (-)
AMCG00006121 nfic,LOC106613851 coding upstream 158930 17187308 ~ 17225885 (-)
AMCG00006122 nfic,LOC107585880 coding upstream 245407 17273785 ~ 17281599 (-)
AMCG00006123 NA coding upstream 396460 17424838 ~ 17442831 (-)
G156378 NA non-coding downstream 100165 16865098 ~ 16922863 (-)
G156344 NA non-coding downstream 346981 16674798 ~ 16676047 (-)
G156228 NA non-coding downstream 951500 16066669 ~ 16071528 (-)
G156225 NA non-coding downstream 959956 16062733 ~ 16063072 (-)
G156207 NA non-coding downstream 1022989 15994787 ~ 16000039 (-)
G156668 NA non-coding upstream 1103951 18132329 ~ 18137505 (-)
G156670 NA non-coding upstream 1110141 18138519 ~ 18144775 (-)
G156696 NA non-coding upstream 1405228 18433606 ~ 18434245 (-)
G156716 NA non-coding upstream 1503684 18532062 ~ 18532447 (-)
G156717 NA non-coding upstream 1504805 18533183 ~ 18538243 (-)
AMCG00006127 NA other downstream 59378 16947997 ~ 16963650 (-)
G156341 NA other downstream 342256 16651540 ~ 16680772 (-)
AMCG00006118 NA other downstream 501339 16505364 ~ 16521689 (-)
AMCG00006083 NA other downstream 560863 16454284 ~ 16462165 (-)
G156206 klhl26,LOC107680559,LOC107597147 other downstream 1065938 15954076 ~ 15957090 (-)
G156907 NA other upstream 2246822 19275200 ~ 19293820 (-)
AMCG00006201 LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 other upstream 2420553 19448931 ~ 19463205 (-)
G157059 NA other upstream 3681421 20709799 ~ 20712216 (-)

Expression


Co-expression Network