AMCG00006139


Basic Information

Item Value
gene id AMCG00006139
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 18372934 ~ 18379731 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006139
TTGGAGACAGCCAAGAACTGCATGTCGAGTTGCTTCATTCACGGTCAGTTGACAGTGGAGACTTTTCCCAGGAAAATTAGCCTCAAGATCCCAGCAAGCAAACGAGTGGGAAAATGCCCGCAGCCTCTTCAGGCTTACTATGCAGTCGATCTGTTCCGCCTTGATTCTGCTGCTGCAACAGGTGCGGAGGTGGGCTTGATGCGCCTGGGAAACAGGGAGCTGCTGACACTGCAGTGCCGACAGACCCATCTGTCTGTGGTCTCCTGGGGACGCAACACAAACGAGCAGCTCTTTCCCATGTTTGAAAGACCCAGGAATCAGGCTCAGTTATTTCAACCCCTCAGCCCAAGCGCCCCCCACTTCTTCTTATCCACCCCCATTCCCACCTCAGCCCCTGTCAGCAATGTTCCCAGACACACAGAAGAGGGAAAGGTGGGTGTTATCACCGAAACTCAGGAAATGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006139 True 465 mRNA 0.53 3 18372934 18379731

Neighbor

gene id symbol gene type direction distance location
AMCG00006169 diras1,LOC106573976,LOC105906138,LOC106613605 coding upstream 242438 18116638 ~ 18130496 (+)
AMCG00006164 NA coding upstream 364563 18004577 ~ 18008371 (+)
AMCG00006162 LOC106613602 coding upstream 412724 17948523 ~ 17960210 (+)
AMCG00006187 NA coding upstream 467310 17879983 ~ 17905624 (+)
AMCG00006189 thop1,mepd coding upstream 495875 17852039 ~ 17877059 (+)
AMCG00006177 NA coding downstream 74167 18453898 ~ 18455420 (+)
AMCG00006176 NA coding downstream 76983 18456714 ~ 18467995 (+)
AMCG00006173 LOC106573927,LOC106613609 coding downstream 138651 18518382 ~ 18534722 (+)
AMCG00006175 fcho1,LOC107751067,LOC101065258,LOC102200842,LOC103367496 coding downstream 212896 18592627 ~ 18636029 (+)
AMCG00006170 NA coding downstream 339942 18719673 ~ 18741090 (+)
G156671 NA non-coding upstream 149786 18158840 ~ 18223148 (+)
G156598 NA non-coding upstream 528958 17842139 ~ 17843976 (+)
G156567 NA non-coding upstream 595064 17774665 ~ 17777870 (+)
G156564 LOC100846954,LOC107575789 non-coding upstream 664213 17707670 ~ 17708721 (+)
G156521 NA non-coding upstream 801402 17567559 ~ 17571532 (+)
G156769 NA non-coding downstream 362871 18742602 ~ 18749749 (+)
G156771 NA non-coding downstream 377195 18756926 ~ 18757205 (+)
G156772 NA non-coding downstream 377535 18757266 ~ 18757542 (+)
G156777 NA non-coding downstream 397461 18777192 ~ 18777554 (+)
G156807 NA non-coding downstream 461072 18840803 ~ 18843866 (+)
AMCG00006138 NA other upstream 16345 18190224 ~ 18356589 (+)
G156640 NA other upstream 392297 17973741 ~ 17980637 (+)
AMCG00006190 LOC107695212,LOC107676806 other upstream 608706 17746133 ~ 17764228 (+)
AMCG00006188 adamts10,LOC106584371,LOC108439663 other upstream 637850 17662190 ~ 17735084 (+)
AMCG00006149 NA other upstream 1245301 17123205 ~ 17127633 (+)
AMCG00006174 NA other downstream 98397 18478128 ~ 18480087 (+)

Expression


Co-expression Network