AMCG00006145


Basic Information

Item Value
gene id AMCG00006145
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 16722210 ~ 16749395 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006145
ATGCTGACCCGCAGCCCTCCATCGGCCCTGGCTGAGCTGCTGCTGACGGTGCTGCAGACCAGTGGCTGGCAGGAGGGGACTGCTGTACTGTGCCGGGGCTGGGAGGAGGCAGGGGTGCTGGAACTGATGGAGCTACAGAGCCAGCCTGGAGCGCGCTGGCACCTCCGGGCAACACTCAACCTCACGGGGGCagctggggaggaggaggaggtgggccAGGTGGCACGTTTCCTCTCCCAGCACTTTCGCCAAACCAAGCCCCCCCCAGCCTCAGTGCTCCTGTTTGGGGCTGATCCCCAGTGTGCAGCCACTGTCCTCCGCAGCGCCCAGGAGTTGGGCCTCACCCTGCCCACAGTGCACTGGCTTCTAGGATACCCACTGAGTCCCGATGCCCTCCACACAATCGGCCTGCCCCTAGGTTTGCTGGCCTATGGGGAGGTGGAACGCAAACCTCTGGATTACTACATTCAAGATGCTTTGGAGCTTATCAGCAGAGCACTGTCTGCTGCCACCGCCGTGCGCCCAGACCTAGCCCTCATCCAGAACATGGTCAACTGCTACGACAAAACAGATCGAGGGTCGACGCCCTCCTCAGGGCAGTACCTCTCCAGGTTCCTGAGTAACACTTCCTTCACTGGGCTGACGGGTCCTGTTAAGGTGTTCCACAACTCCTCGCTGGTCGTCCCCTCTCAACGCTTCCATGTGTGGAGCCTGCGGCGAGACGCCCTCGGACAGCCCACCTGGGTGACGGTGGGGAGCTGGCATTTGGGGCGTCTAGAGGTAGAGGAGCAGGGTCTTTGGCAGGCACAGGCTCCACGCCGCCGATCAGAGGGTCAGGGAGGGCGGAGAGGCGGGCGTTGGGATGGGGGCCTTCTGAGCGAGGGGAGCCGACTGCGGGTGGTGACCCTGGTAGAGCACCCCTTTGTTTTCACCCGGGAGGTGGACGAAGACGGGAGCTGCCCGGCTGGCCAATTCTGCTTGGATCCCCGCATCAATGACTCTGACACCCTAGACCATCTCTTCCGGGAACTCGACCATGGAAACAGCACATTCCTGCCGCCCGATTTCCGCAAGTGCTGCTATGGCTACTGCATCGACCTGCTTGAGAAGCTGGCCGAGGACCTACGCTTTGAGTTCGACCTCTACATCGTGGGCGATGGCAAGTATGGGGCCTGTAAGAACAACCGTTGGACGGGGTTGGTGGGCGACCTCTTGAGTGGCGCAGCGGACATGGCGGTCACCAGCTTCAGCATCAACTCAGCCCGCAGCAAGGTCATGGACTTCACCAGCCCCTTCTTTTCCACCAGCCTGGGAATCCTGGTGAGGAGCAAGGACACAGCTGCCCCCATTGGGGCCTTCATGTGGCCTCTCCACTGGTCCATGTGGGTGGGCATCTTTGTCTCGCTACACATCACAGCACTTTTCCTCACCCTCTACGAGTGGAAGAGCCCCTTTGGGATGACCCCTCATGGCCGAAACCGCATGAAAGTCTTTTCATACTCATCGGCTCTTAACCTCTGCTATGCCATCCTCTTTGGACGCACCGTCTCCAGCAAGACACCCAAGTGCTGGACAGGCCGCTTCCTCATGAACCTTTGGGCCATCTTCTGCCTGCTGGTGCTCTCCAGCTACACCGCCAATCTGGCTGCTGTCATGGTGGGCGAAAAGACTTTTGAGGAGCTCTCGGGCATCCATGACACCAAGCTCCACCACCCCTCCCATGGCTTCCGCTTTGGCACAGTTCGGGAGAGCAGTGCAGAAGACTACATGAAAAAGAGTTTCCCGGAGATGCATGAGTACATGAGACGCTATAATGAACCCACCACTCCTGAAGGTGTAGCCACACTCAAGACAGATCCTCCTCAGCTAGATGCTTTCATCATGGACAAGGCCCTGCTGGACTATGAGGTGTCCATCGACGCAGACTGCAAGCTTCTGACTGTGGGGAAGCCCTTTGCCATTGAAGGCTATGGGATCGGGCTGCCCCAGAACTCGCCGCTCACCTCCAATGTGTCAGAATTCATCAGCCGCTACAAGTCGGATGGCTTTATGGACATGCTGCATGACAAGTGGTACAAGACTCTGCAGATGGGGATTCGTCATTTCTCcgggctgtttgtgttgctcAGCGTGGGGGTGGCAGGGGCCCTGCTCACGCTGGTCGGGGAGCATGCCTTCTACCGCCTCATCCTGCCCCACATCCGCCGGAGACAGAAGTTCAAGTACTGGCTGCACACCAGCCAGAAAATCCACCGGGCCCTGAATATGACCTATGAGGACTGGAACAACGAGCGAGGCGAGGGCACCAAGGAGACCAAGGACAACAAGCGGGTCCATTTCAACCTGGAGACACTCAACACCAGGCGGCTTCTGGCACGAGCCACACCTGAAGGtgggggtggtggaggaggagcaggaggtggaggagtAGGGGTGggaggggcaggaggaggaTTGGCAAGGGTCTTGGCACTGCGGGTTTGTGAGAATGGGGGTCCTACCACGCCCACTCCActccccacctcctcctccaccacgTCTTCCCCTTCCTCTTTAACCCCAGCTGCCAGAGACAGCGAGCTTCAGGAGCTGCAGGAGCGCATCGAGGAGATTCGTGACCAGCTAAGGGCCGCCCTGGCCAGGAGAGCCGAGCTTCAGACCTGTCTGGCCCGAGAGAAGGCATGCCAGGATTCTGCAGCCATCAAGCCCACAGACacaaccacccccacccccaccgcTGCTAAAGACGTCGCGGAGAACAGACATGGTATTGAAGATGTAAAGAGAGaaagccagaaaaaaaaacaaaaaaaaaacataataaagaacGATAATTTAGCTGGAGAAAAGTGCGGCCAAGCTCAGGAAGGGGTGGGCTGGGGGTCAGGAGGGGTGGCTGTGCAGTCGCCTTCTGTCTTAACGTCCCATTCCATTTGGGTGGTCTGCATGGGCTCCACGAGGGAGGGCGGCCTCCCTCCCACAGGGCTCCTACAGTCTACCAAGGAGTCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006145 True 3012 mRNA 0.59 9 16722210 16749395

Neighbor

gene id symbol gene type direction distance location
AMCG00006144 med16,LOC106613614 coding downstream 18285 16694712 ~ 16703925 (-)
AMCG00006147 NA coding downstream 40742 16660952 ~ 16681468 (-)
AMCG00006146 NA coding downstream 61294 16648022 ~ 16660916 (-)
AMCG00006117 NA coding downstream 84244 16627973 ~ 16637966 (-)
AMCG00006120 NA coding downstream 156053 16528222 ~ 16566157 (-)
AMCG00006129 NA coding upstream 86484 16835879 ~ 16844932 (-)
AMCG00006126 wdr18,LOC106613619 coding upstream 154198 16903593 ~ 16905803 (-)
AMCG00006128 NA coding upstream 173500 16922895 ~ 16941137 (-)
AMCG00006132 NA coding upstream 231150 16980545 ~ 17008274 (-)
AMCG00006131 NA coding upstream 272874 17022269 ~ 17022594 (-)
G156344 NA non-coding downstream 46163 16674798 ~ 16676047 (-)
G156228 NA non-coding downstream 650682 16066669 ~ 16071528 (-)
G156225 NA non-coding downstream 659138 16062733 ~ 16063072 (-)
G156207 NA non-coding downstream 722171 15994787 ~ 16000039 (-)
G156203 NA non-coding downstream 774683 15947208 ~ 15947527 (-)
G156378 NA non-coding upstream 115703 16865098 ~ 16922863 (-)
G156668 NA non-coding upstream 1382934 18132329 ~ 18137505 (-)
G156670 NA non-coding upstream 1389124 18138519 ~ 18144775 (-)
G156696 NA non-coding upstream 1684211 18433606 ~ 18434245 (-)
G156716 NA non-coding upstream 1782667 18532062 ~ 18532447 (-)
G156341 NA other downstream 41438 16651540 ~ 16680772 (-)
AMCG00006118 NA other downstream 200521 16505364 ~ 16521689 (-)
AMCG00006083 NA other downstream 260045 16454284 ~ 16462165 (-)
G156206 klhl26,LOC107680559,LOC107597147 other downstream 765120 15954076 ~ 15957090 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other downstream 1230568 15433432 ~ 15491642 (-)
AMCG00006127 NA other upstream 198602 16947997 ~ 16963650 (-)
G156907 NA other upstream 2525805 19275200 ~ 19293820 (-)
AMCG00006201 LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 other upstream 2699536 19448931 ~ 19463205 (-)
G157059 NA other upstream 3960404 20709799 ~ 20712216 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location