AMCG00006146


Basic Information

Item Value
gene id AMCG00006146
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 16648022 ~ 16660916 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006146
atgaatacattaaaaccaAAGGAGGGATCCAGGCTGCAGCCACTCAGAGAACAAGTCTGTGCTGCTGACCAGAGCAAGTCTACCGCCACTGTCACGGACTGGAAGTACACCCCCATTGGTAATGAACAGGCTCTGGAAGACGCTTTGGTCACCATTGGGCCTGTCATTGATGCCACAACCCCCAATTTACAGTTCTACCTCAAAGCCGACACCTTAAACTCCAAGTGTACCATTTGGAAACAGAGTCACGCCATGGTCTTGGTACTGACAAGTACCTGCACCATCAAGGACAGCTGGGGCCTGTACTGGGGAGAGAATGGCTACCTTCGTCTGGCCAAGGACAAAGCTACCCACTGTGGCATTGGCCAGTATGGAGTCGTCCCATTCGTTGGGGAtgtgaagagaagagaaatCTGGGAAGCAAACTACAGAGCCATTGATGAGCACAATCAGAGATTCCAAGAGGGCAAGGAGACGTACATAATGGGCATGAACCAATTTGGAGACCTGACCCCAGAAGAGTTTGTGAACTTGACGCACGTGACCATGTCCAGTGTAAAAATAACGGACAACAATCAGTTGACGGCTGAAGAGCTCCGTGATGCGGCCAAAAAGCTGAATGTCACAAGTATTGATTACAGAACCCTGGGCTACATCACTCCTCTAGAGGATCAGGGCTTGTGTGGGTGCTGTTGGGCCTACAGTGCTGCAGGACCTCTGGAAGCCCAGTGGATGAAGAAGACTGGCAAATTGATACCTCTGAGCAAACAGCAGCTGGTGGACTGCACCTTGAACTCTGGAAATCGAGGCTGCTCTGGAGGATTACCTTGCATTGCGTATGAATACATTAAAGCCAATGGCGGGATCCAGGCTGCTGCCACCTACCCATACGCAATGAAGGAAAAAGTCTGTGCTGCTAACCAGAGCAAGTTTGTCACTACAGTCAAGGACTGGAAGTACCTCCCCTTCGGTGATGAACAGGCCCTGGAAGATGCTTTGGTAACAATTGGGCCAGTCGCAATCACCATGGACTCCACAACCATCAAATTCCAGTTCTACCTCAAAGGAGTCTTCTATGACCCCAAGTGTACAATCTGGAAACAGAATCATGCCATGGTCTTGGTTGGATTTGGTACTGTAGGTACTGAAAATTACTGGACCATCAAGAACAGCTGGGGCCCCTACTGGGGAGAAAACGGTTATCTTCGTCtgaccaaggacaaaggcaatCACTGTGGCATTGGGCAGTATGGAGTCGTCCCATTTGTAAGAGAGATCTGCGAAGCAAACTACAGAGCCATTGAGGAGCACAATCAGAGATTCCAAGAGGGCAAGGAGACATACACCACAGAAGAGTTTGTGAACCTGACTCAGGTGACCATGTCCAGGGCAAACACGAGAAACAACAATCAGCTGATGGCTGAAGAGCTTTGTGATGTGGCCAAAAATCTGAATGTCAAAAGCATTGATTACAGGACCCTGGGATACATCACTCCAGTTGAGGATCAGGACTTGTGTGGGTCCTGCTGGACCTTCAGTGCTGCAGGAGCTCTGGAAGCCCAGTGGATGAAGAAGACAAACAAACTGATCCCTCTAAGCAAACAGCAGCTGGTAGACTGCACCTTGAACTCTGGAAATAGAGACTGCTCTGGAGGATTGTCTTGCATTGCCCTGGAATACATTAAATCCAAAGGAGGGATCCAGGCTGCAGCCACCTACCCCTATGCCATGAAGGTGAGCCATCAGAGAGTCTTCTATGACCCCAAGTGTACCATCTGGAAACAGGCCATGGTCTTGTTTGGATTCGGTACTGAAGGTACTGACAAGTACTGGACTATCTAG

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006146 True 1842 mRNA 0.49 15 16648022 16660916

Neighbor

gene id symbol gene type direction distance location
AMCG00006117 NA coding downstream 10056 16627973 ~ 16637966 (-)
AMCG00006120 NA coding downstream 81865 16528222 ~ 16566157 (-)
AMCG00006119 NA coding downstream 147444 16498652 ~ 16500578 (-)
AMCG00006084 ptbp1,LOC106613576 coding downstream 160795 16464012 ~ 16487227 (-)
AMCG00006110 LOC106574064,LOC106613575,LOC105011408 coding downstream 360694 16277086 ~ 16287328 (-)
AMCG00006147 NA coding upstream 36 16660952 ~ 16681468 (-)
AMCG00006144 med16,LOC106613614 coding upstream 33796 16694712 ~ 16703925 (-)
AMCG00006145 NA coding upstream 61294 16722210 ~ 16749395 (-)
AMCG00006129 NA coding upstream 174963 16835879 ~ 16844932 (-)
AMCG00006126 wdr18,LOC106613619 coding upstream 242677 16903593 ~ 16905803 (-)
G156228 NA non-coding downstream 576494 16066669 ~ 16071528 (-)
G156225 NA non-coding downstream 584950 16062733 ~ 16063072 (-)
G156207 NA non-coding downstream 647983 15994787 ~ 16000039 (-)
G156203 NA non-coding downstream 700495 15947208 ~ 15947527 (-)
G156113 NA non-coding downstream 1032235 15615562 ~ 15615787 (-)
G156344 NA non-coding upstream 13882 16674798 ~ 16676047 (-)
G156378 NA non-coding upstream 204182 16865098 ~ 16922863 (-)
G156668 NA non-coding upstream 1471413 18132329 ~ 18137505 (-)
G156670 NA non-coding upstream 1477603 18138519 ~ 18144775 (-)
G156696 NA non-coding upstream 1772690 18433606 ~ 18434245 (-)
AMCG00006118 NA other downstream 126333 16505364 ~ 16521689 (-)
AMCG00006083 NA other downstream 185857 16454284 ~ 16462165 (-)
G156206 klhl26,LOC107680559,LOC107597147 other downstream 690932 15954076 ~ 15957090 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other downstream 1156380 15433432 ~ 15491642 (-)
AMCG00006102 slc5a5 other downstream 1640043 14998500 ~ 15007979 (-)
AMCG00006127 NA other upstream 287081 16947997 ~ 16963650 (-)
G156907 NA other upstream 2614284 19275200 ~ 19293820 (-)
AMCG00006201 LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 other upstream 2788015 19448931 ~ 19463205 (-)
G157059 NA other upstream 4048883 20709799 ~ 20712216 (-)

Expression


Co-expression Network