AMCG00006147


Basic Information

Item Value
gene id AMCG00006147
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 16660952 ~ 16681468 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006147
GTCTTCTATGACCCCAAGTGTACCAATTGGAAAAAGAATCATGCCGTGGTCTTGGTTGGATTTGCTGGGGCACCAGCTGGGGAGAAAACGGCTACCTTCGTCTGGCCAAGGACAAAGGCGACGAATAGCTCCTGCAACACTGAAGGCCCAGCAGCACCCACATTAGCCCTGGgagggaaagaaatgaaaacactaGTGGCCCGGTTCCTGTGCTCTGTTCCCCTCGCCTGGGCAGCTGCCCAGTCCTCCTCAGTGTACCCAAAAGAAGCCTGCAGCCTGAGGGAAGTTTTAGAGGAGCACTTCATATGGCAGGCTCTGGAAGATGCTCTGGTCACCATTGGGCCTTTCGCAATCACCATTGATGCAACAACCCGCAATTTCCAGTTTTACCAGAATGGAGTCTTCTATGACCCCCAGTGTACCACCTGGAAACAGAATCATGCCATGGTCTTGGTTGGATTTGGTACTGCAGGAACTGACAATTACTGGATCATCAAGAACAGCTGGGGCACCGGCTGGGGAGAAAACGGCTACCTTCGTCTGGCCAAGGACAAAGGCGACGAATGTGGCATTAGCCAGAATGGAGTCATCCCATTGAACATTAAAGCTGTCTATGTCGTGGTCTCCGTGGTTCTCTACATCAATGTGGTCACCTGCCTGGACCCTCAGCTGGATTCTGAGTGGGAGAACTGGAGTATCAAATTCCAGAAACCTAAGACGAGGGTGACCATGTCCAGGGCAAACACGAGAAGCAACAATCAGCTGACGGCTGAAGAGCTTCGTGACGCGGCCAGCAAACTGAACGTCACAAGTATTGATTACAGGACCCTGGGATACATCACTCCAATTGAGGATCAGCTAGGTCCTAACAGGTTGCTTTCCGGCTTGTGTGGGTCCTGCTGGCCCTATAGTGCTGCAGGACCTCTGGAAGTCCAGTGGATGAAGAAGACAAACAAACCGATACCTCTGAGCAAACAGCAGCTGATGGACTGCACTTTGACTGAACTCTGGAAA

Function

GO:

id name namespace
GO:0008233 peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006147 True 1014 mRNA 0.52 10 16660952 16681468

Neighbor

gene id symbol gene type direction distance location
AMCG00006146 NA coding downstream 36 16648022 ~ 16660916 (-)
AMCG00006117 NA coding downstream 22986 16627973 ~ 16637966 (-)
AMCG00006120 NA coding downstream 94795 16528222 ~ 16566157 (-)
AMCG00006119 NA coding downstream 160374 16498652 ~ 16500578 (-)
AMCG00006084 ptbp1,LOC106613576 coding downstream 173725 16464012 ~ 16487227 (-)
AMCG00006144 med16,LOC106613614 coding upstream 13244 16694712 ~ 16703925 (-)
AMCG00006145 NA coding upstream 40742 16722210 ~ 16749395 (-)
AMCG00006129 NA coding upstream 154411 16835879 ~ 16844932 (-)
AMCG00006126 wdr18,LOC106613619 coding upstream 222125 16903593 ~ 16905803 (-)
AMCG00006128 NA coding upstream 241427 16922895 ~ 16941137 (-)
G156228 NA non-coding downstream 589424 16066669 ~ 16071528 (-)
G156225 NA non-coding downstream 597880 16062733 ~ 16063072 (-)
G156207 NA non-coding downstream 660913 15994787 ~ 16000039 (-)
G156203 NA non-coding downstream 713425 15947208 ~ 15947527 (-)
G156113 NA non-coding downstream 1045165 15615562 ~ 15615787 (-)
G156378 NA non-coding upstream 183630 16865098 ~ 16922863 (-)
G156668 NA non-coding upstream 1450861 18132329 ~ 18137505 (-)
G156670 NA non-coding upstream 1457051 18138519 ~ 18144775 (-)
G156696 NA non-coding upstream 1752138 18433606 ~ 18434245 (-)
G156716 NA non-coding upstream 1850594 18532062 ~ 18532447 (-)
AMCG00006118 NA other downstream 139263 16505364 ~ 16521689 (-)
AMCG00006083 NA other downstream 198787 16454284 ~ 16462165 (-)
G156206 klhl26,LOC107680559,LOC107597147 other downstream 703862 15954076 ~ 15957090 (-)
G156088 rps15,LOC107680474,LOC107685215,LOC107578086 other downstream 1169310 15433432 ~ 15491642 (-)
AMCG00006102 slc5a5 other downstream 1652973 14998500 ~ 15007979 (-)
AMCG00006127 NA other upstream 266529 16947997 ~ 16963650 (-)
G156907 NA other upstream 2593732 19275200 ~ 19293820 (-)
AMCG00006201 LOC105903982,LOC108433090,LOC106600049,LOC105020399,LOC107384124,LOC106569512 other upstream 2767463 19448931 ~ 19463205 (-)
G157059 NA other upstream 4028331 20709799 ~ 20712216 (-)

Expression


Co-expression Network