AMCG00006169 (diras1,LOC106573976,LOC105906138,LOC106613605)


Basic Information

Item Value
gene id AMCG00006169
gene name diras1,LOC106573976,LOC105906138,LOC106613605
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 18116638 ~ 18130496 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00006169
ATGCCAAACATGGAGGATAATGAGGATGAGGAGGAtgatgaagaagaggaagaggggATCAAGGGCACCATGGAGAACATCCCCATCATGCTAGTGGGCAACAAGTGTGATGAAACCCAGCGCGAGGTGGAGACCAAGGAAGGGGAGGCCCAGGCCACCAGCTGGAAGTGCGCCTTCATGGAGACCTCAGCCAAGATGAACTACAATGTCAAGGAGCTCTTCCAGGAGCTGCTCAACCTGGAGAAGAAGAGGAACATGAGCCTGAACATCGATGGCAAGCGCTCCAGCAAGCAGAAGCGGGCGGACAAGATCAAGGGGAAGTGCAGTGTGATGTAG

Function

symbol description
diras1 Enables GTP binding activity and GTPase activity. Predicted to be involved in signal transduction. Located in plasma membrane.

NR:

description
PREDICTED: GTP-binding protein Di-Ras1

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00006169 True 336 mRNA 0.54 2 18116638 18130496

Neighbor

gene id symbol gene type direction distance location
AMCG00006164 NA coding upstream 108267 18004577 ~ 18008371 (+)
AMCG00006162 LOC106613602 coding upstream 156428 17948523 ~ 17960210 (+)
AMCG00006187 NA coding upstream 211014 17879983 ~ 17905624 (+)
AMCG00006189 thop1,mepd coding upstream 239579 17852039 ~ 17877059 (+)
AMCG00006191 NA coding upstream 305179 17788983 ~ 17811459 (+)
AMCG00006139 NA coding downstream 242438 18372934 ~ 18379731 (+)
AMCG00006177 NA coding downstream 323402 18453898 ~ 18455420 (+)
AMCG00006176 NA coding downstream 326218 18456714 ~ 18467995 (+)
AMCG00006173 LOC106573927,LOC106613609 coding downstream 387886 18518382 ~ 18534722 (+)
AMCG00006175 fcho1,LOC107751067,LOC101065258,LOC102200842,LOC103367496 coding downstream 462131 18592627 ~ 18636029 (+)
G156598 NA non-coding upstream 272662 17842139 ~ 17843976 (+)
G156567 NA non-coding upstream 338768 17774665 ~ 17777870 (+)
G156564 LOC100846954,LOC107575789 non-coding upstream 407917 17707670 ~ 17708721 (+)
G156521 NA non-coding upstream 545106 17567559 ~ 17571532 (+)
G156509 NA non-coding upstream 569277 17535631 ~ 17547361 (+)
G156671 NA non-coding downstream 28344 18158840 ~ 18223148 (+)
G156769 NA non-coding downstream 612106 18742602 ~ 18749749 (+)
G156771 NA non-coding downstream 626430 18756926 ~ 18757205 (+)
G156772 NA non-coding downstream 626770 18757266 ~ 18757542 (+)
G156777 NA non-coding downstream 646696 18777192 ~ 18777554 (+)
G156640 NA other upstream 136001 17973741 ~ 17980637 (+)
AMCG00006190 LOC107695212,LOC107676806 other upstream 352410 17746133 ~ 17764228 (+)
AMCG00006188 adamts10,LOC106584371,LOC108439663 other upstream 381554 17662190 ~ 17735084 (+)
AMCG00006149 NA other upstream 989005 17123205 ~ 17127633 (+)
G156327 NA other upstream 1487456 16627793 ~ 16629182 (+)
AMCG00006138 NA other downstream 59728 18190224 ~ 18356589 (+)
AMCG00006174 NA other downstream 347632 18478128 ~ 18480087 (+)

Expression


Co-expression Network